RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 RGL3Q3MIN7 710 aa18.56■□□□□ 0.56
ERGIC3-202ENST00000348547 IQGAP1P46940 1657 aa18.56■□□□□ 0.56
ERGIC3-202ENST00000348547 SETD1AO15047 1707 aaKnown RBP18.55■□□□□ 0.56
ERGIC3-202ENST00000348547 NRXN1Q9ULB1 1477 aa18.55■□□□□ 0.56
ERGIC3-202ENST00000348547 LTKP29376 864 aa18.55■□□□□ 0.56
ERGIC3-202ENST00000348547 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
ERGIC3-202ENST00000348547 NUTM2DQ5VT03 806 aaPredicted RBP18.54■□□□□ 0.56
ERGIC3-202ENST00000348547 MYOM2P54296 1465 aa18.53■□□□□ 0.56
ERGIC3-202ENST00000348547 SCAF11Q99590 1463 aaKnown RBP18.52■□□□□ 0.55
ERGIC3-202ENST00000348547 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
ERGIC3-202ENST00000348547 SETBP1Q9Y6X0 1596 aa18.5■□□□□ 0.55
ERGIC3-202ENST00000348547 ASXL1Q8IXJ9 1541 aa18.49■□□□□ 0.55
ERGIC3-202ENST00000348547 ZNF326Q5BKZ1 582 aaKnown RBP18.49■□□□□ 0.55
ERGIC3-202ENST00000348547 THEMISQ8N1K5 641 aaPredicted RBP18.49■□□□□ 0.55
ERGIC3-202ENST00000348547 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
ERGIC3-202ENST00000348547 PIK3C2GO75747 1445 aa18.48■□□□□ 0.55
ERGIC3-202ENST00000348547 MED14O60244 1454 aa18.48■□□□□ 0.55
ERGIC3-202ENST00000348547 SENP3Q9H4L4 574 aaPredicted RBP18.47■□□□□ 0.55
ERGIC3-202ENST00000348547 NCKAP5LQ9HCH0 1330 aa18.47■□□□□ 0.55
ERGIC3-202ENST00000348547 PRAG1Q86YV5 1406 aa18.47■□□□□ 0.55
ERGIC3-202ENST00000348547 TRPM1Q7Z4N2 1603 aa18.47■□□□□ 0.55
ERGIC3-202ENST00000348547 DCAF11Q8TEB1 546 aa18.46■□□□□ 0.55
ERGIC3-202ENST00000348547 RPGRIP1LQ68CZ1 1315 aa18.46■□□□□ 0.55
ERGIC3-202ENST00000348547 TONSLQ96HA7 1378 aa18.46■□□□□ 0.55
ERGIC3-202ENST00000348547 ADAMTS13Q76LX8 1427 aa18.46■□□□□ 0.55
ERGIC3-202ENST00000348547 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
ERGIC3-202ENST00000348547 ALKQ9UM73 1620 aa18.44■□□□□ 0.54
ERGIC3-202ENST00000348547 PLEKHG1Q9ULL1 1385 aa18.43■□□□□ 0.54
ERGIC3-202ENST00000348547 TXNDC2Q86VQ3 553 aa18.43■□□□□ 0.54
ERGIC3-202ENST00000348547 KDM2AQ9Y2K7 1162 aa18.43■□□□□ 0.54
ERGIC3-202ENST00000348547 KIAA1210Q9ULL0 1709 aa18.43■□□□□ 0.54
ERGIC3-202ENST00000348547 ADGRB1O14514 1584 aa18.42■□□□□ 0.54
ERGIC3-202ENST00000348547 NPHP4O75161 1426 aaPredicted RBP18.41■□□□□ 0.54
ERGIC3-202ENST00000348547 LAMC1P11047 1609 aa18.41■□□□□ 0.54
ERGIC3-202ENST00000348547 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
ERGIC3-202ENST00000348547 PPP1R15AO75807 674 aaPredicted RBP18.39■□□□□ 0.53
ERGIC3-202ENST00000348547 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
ERGIC3-202ENST00000348547 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
ERGIC3-202ENST00000348547 DIP2AQ14689 1571 aa18.38■□□□□ 0.53
ERGIC3-202ENST00000348547 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.37■□□□□ 0.53
ERGIC3-202ENST00000348547 TIMELESSQ9UNS1 1208 aa18.37■□□□□ 0.53
ERGIC3-202ENST00000348547 METP08581 1390 aa18.37■□□□□ 0.53
ERGIC3-202ENST00000348547 RALGAPBQ86X10 1494 aa18.36■□□□□ 0.53
ERGIC3-202ENST00000348547 XRN1Q8IZH2 1706 aaKnown RBP18.36■□□□□ 0.53
ERGIC3-202ENST00000348547 VGFO15240 615 aaPredicted RBP18.36■□□□□ 0.53
ERGIC3-202ENST00000348547 EID1Q9Y6B2 187 aa18.36■□□□□ 0.53
ERGIC3-202ENST00000348547 CHD2O14647 1828 aaKnown RBP18.35■□□□□ 0.53
ERGIC3-202ENST00000348547 PTPRUQ92729 1446 aa18.35■□□□□ 0.53
ERGIC3-202ENST00000348547 CFAP70Q5T0N1 1121 aa18.35■□□□□ 0.53
ERGIC3-202ENST00000348547 SLC26A8Q96RN1 970 aa18.35■□□□□ 0.53
ERGIC3-202ENST00000348547 NBPF1Q3BBV0 1214 aa18.34■□□□□ 0.53
ERGIC3-202ENST00000348547 C14orf93Q9H972 538 aaKnown RBP18.33■□□□□ 0.53
ERGIC3-202ENST00000348547 NWD1Q149M9 1564 aa18.32■□□□□ 0.52
ERGIC3-202ENST00000348547 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
ERGIC3-202ENST00000348547 ARHGEF28Q8N1W1 1705 aaKnown RBP18.31■□□□□ 0.52
ERGIC3-202ENST00000348547 STAC3Q96MF2 364 aa18.3■□□□□ 0.52
ERGIC3-202ENST00000348547 GPRASP1Q5JY77 1395 aa18.3■□□□□ 0.52
ERGIC3-202ENST00000348547 TMEM132EQ6IEE7 984 aa18.3■□□□□ 0.52
ERGIC3-202ENST00000348547 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
ERGIC3-202ENST00000348547 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
ERGIC3-202ENST00000348547 XIRP1Q702N8 1843 aaKnown RBP18.27■□□□□ 0.52
ERGIC3-202ENST00000348547 YTHDC2Q9H6S0 1430 aaKnown RBP18.26■□□□□ 0.51
ERGIC3-202ENST00000348547 CPS1P31327 1500 aa18.26■□□□□ 0.51
ERGIC3-202ENST00000348547 TECPR2O15040 1411 aa18.24■□□□□ 0.51
ERGIC3-202ENST00000348547 LTBP4Q8N2S1 1624 aa18.23■□□□□ 0.51
ERGIC3-202ENST00000348547 BCANQ96GW7 911 aa18.23■□□□□ 0.51
ERGIC3-202ENST00000348547 ZNF335Q9H4Z2 1342 aaPredicted RBP18.23■□□□□ 0.51
ERGIC3-202ENST00000348547 LRPPRCP42704 1394 aaKnown RBP18.23■□□□□ 0.51
ERGIC3-202ENST00000348547 ROBO2Q9HCK4 1378 aa18.23■□□□□ 0.51
ERGIC3-202ENST00000348547 ROCK2O75116 1388 aaKnown RBP18.22■□□□□ 0.51
ERGIC3-202ENST00000348547 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
ERGIC3-202ENST00000348547 DLC1Q96QB1 1528 aa18.21■□□□□ 0.51
ERGIC3-202ENST00000348547 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.21■□□□□ 0.51
ERGIC3-202ENST00000348547 PLEKHH1Q9ULM0 1364 aa18.2■□□□□ 0.5
ERGIC3-202ENST00000348547 NALCNQ8IZF0 1738 aa18.2■□□□□ 0.5
ERGIC3-202ENST00000348547 ABCC11Q96J66 1382 aa18.19■□□□□ 0.5
ERGIC3-202ENST00000348547 KCNA6P17658 529 aa18.19■□□□□ 0.5
ERGIC3-202ENST00000348547 QRICH2Q9H0J4 1663 aa18.19■□□□□ 0.5
ERGIC3-202ENST00000348547 PTCH1Q13635 1447 aa18.19■□□□□ 0.5
ERGIC3-202ENST00000348547 STK26Q9P289 416 aa18.18■□□□□ 0.5
ERGIC3-202ENST00000348547 NKTRP30414 1462 aaKnown RBP18.18■□□□□ 0.5
ERGIC3-202ENST00000348547 AMOTL2Q9Y2J4 779 aa18.17■□□□□ 0.5
ERGIC3-202ENST00000348547 LRRC7Q96NW7 1537 aa18.16■□□□□ 0.5
ERGIC3-202ENST00000348547 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
ERGIC3-202ENST00000348547 USP47Q96K76 1375 aa18.15■□□□□ 0.5
ERGIC3-202ENST00000348547 CARD11Q9BXL7 1154 aa18.15■□□□□ 0.5
ERGIC3-202ENST00000348547 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
ERGIC3-202ENST00000348547 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.49
ERGIC3-202ENST00000348547 DMRT2Q9Y5R5 561 aa18.14■□□□□ 0.49
ERGIC3-202ENST00000348547 FAM135BQ49AJ0 1406 aa18.13■□□□□ 0.49
ERGIC3-202ENST00000348547 WAPLQ7Z5K2 1190 aa18.13■□□□□ 0.49
ERGIC3-202ENST00000348547 TULP4Q9NRJ4 1543 aa18.11■□□□□ 0.49
ERGIC3-202ENST00000348547 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
ERGIC3-202ENST00000348547 PRAM1Q96QH2 718 aa18.1■□□□□ 0.49
ERGIC3-202ENST00000348547 TMEM94Q12767 1356 aa18.08■□□□□ 0.49
ERGIC3-202ENST00000348547 TESK2Q96S53 571 aa18.08■□□□□ 0.49
ERGIC3-202ENST00000348547 HSPA5P11021 654 aaKnown RBP18.07■□□□□ 0.48
ERGIC3-202ENST00000348547 SAFB2Q14151 953 aaKnown RBP eCLIP18.07■□□□□ 0.48
ERGIC3-202ENST00000348547 HIRIP3Q9BW71 556 aaPredicted RBP18.07■□□□□ 0.48
ERGIC3-202ENST00000348547 USP32Q8NFA0 1604 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms