RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 ZFYVE9O95405 1425 aa16.93■□□□□ 0.3
UBE2A-201ENST00000346330 KCNA6P17658 529 aa16.92■□□□□ 0.3
UBE2A-201ENST00000346330 ITGAEP38570 1179 aa16.92■□□□□ 0.3
UBE2A-201ENST00000346330 RPRD2Q5VT52 1461 aaKnown RBP16.92■□□□□ 0.3
UBE2A-201ENST00000346330 GCC2Q8IWJ2 1684 aa16.91■□□□□ 0.3
UBE2A-201ENST00000346330 RGS17Q9UGC6 210 aaPredicted RBP16.9■□□□□ 0.3
UBE2A-201ENST00000346330 ROBO1Q9Y6N7 1651 aa16.9■□□□□ 0.3
UBE2A-201ENST00000346330 UNC13BO14795 1591 aa16.89■□□□□ 0.3
UBE2A-201ENST00000346330 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
UBE2A-201ENST00000346330 ROCK1Q13464 1354 aa16.89■□□□□ 0.29
UBE2A-201ENST00000346330 RIMS2Q9UQ26 1411 aa16.88■□□□□ 0.29
UBE2A-201ENST00000346330 PROSER2Q86WR7 435 aaPredicted RBP16.88■□□□□ 0.29
UBE2A-201ENST00000346330 BCANQ96GW7 911 aa16.87■□□□□ 0.29
UBE2A-201ENST00000346330 TMEM131LA2VDJ0 1609 aa16.87■□□□□ 0.29
UBE2A-201ENST00000346330 CHGAP10645 457 aaKnown RBP16.86■□□□□ 0.29
UBE2A-201ENST00000346330 PLEKHG1Q9ULL1 1385 aa16.86■□□□□ 0.29
UBE2A-201ENST00000346330 E9PCH4 1651 aa16.85■□□□□ 0.29
UBE2A-201ENST00000346330 NUP155O75694 1391 aa16.85■□□□□ 0.29
UBE2A-201ENST00000346330 FAM135BQ49AJ0 1406 aa16.85■□□□□ 0.29
UBE2A-201ENST00000346330 PPP1R15AO75807 674 aaPredicted RBP16.84■□□□□ 0.29
UBE2A-201ENST00000346330 NKTRP30414 1462 aaKnown RBP16.84■□□□□ 0.29
UBE2A-201ENST00000346330 ADAMTS13Q76LX8 1427 aa16.83■□□□□ 0.28
UBE2A-201ENST00000346330 IQGAP3Q86VI3 1631 aa16.82■□□□□ 0.28
UBE2A-201ENST00000346330 CHD2O14647 1828 aaKnown RBP16.81■□□□□ 0.28
UBE2A-201ENST00000346330 SETD1AO15047 1707 aaKnown RBP16.8■□□□□ 0.28
UBE2A-201ENST00000346330 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
UBE2A-201ENST00000346330 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
UBE2A-201ENST00000346330 MSH6P52701 1360 aa16.77■□□□□ 0.28
UBE2A-201ENST00000346330 SLAIN2Q9P270 581 aa16.77■□□□□ 0.28
UBE2A-201ENST00000346330 PTPRUQ92729 1446 aa16.77■□□□□ 0.27
UBE2A-201ENST00000346330 PHLPP1O60346 1717 aa16.76■□□□□ 0.27
UBE2A-201ENST00000346330 POTEAQ6S8J7 498 aa16.76■□□□□ 0.27
UBE2A-201ENST00000346330 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.76■□□□□ 0.27
UBE2A-201ENST00000346330 NRXN3Q9Y4C0 1643 aa16.76■□□□□ 0.27
UBE2A-201ENST00000346330 LRP6O75581 1613 aa16.75■□□□□ 0.27
UBE2A-201ENST00000346330 HDGFP51858 240 aaKnown RBP16.74■□□□□ 0.27
UBE2A-201ENST00000346330 RRBP1Q9P2E9 1410 aaKnown RBP16.72■□□□□ 0.27
UBE2A-201ENST00000346330 NAIPQ13075 1403 aa16.71■□□□□ 0.27
UBE2A-201ENST00000346330 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.71■□□□□ 0.27
UBE2A-201ENST00000346330 AMOTL2Q9Y2J4 779 aa16.71■□□□□ 0.27
UBE2A-201ENST00000346330 DIP2AQ14689 1571 aa16.7■□□□□ 0.26
UBE2A-201ENST00000346330 C14orf37Q86TY3 774 aa16.7■□□□□ 0.26
UBE2A-201ENST00000346330 XRN1Q8IZH2 1706 aaKnown RBP16.7■□□□□ 0.26
UBE2A-201ENST00000346330 METP08581 1390 aa16.69■□□□□ 0.26
UBE2A-201ENST00000346330 PIK3R4Q99570 1358 aa16.68■□□□□ 0.26
UBE2A-201ENST00000346330 NCOA3Q9Y6Q9 1424 aa16.68■□□□□ 0.26
UBE2A-201ENST00000346330 AHDC1Q5TGY3 1603 aaPredicted RBP16.67■□□□□ 0.26
UBE2A-201ENST00000346330 ZNF326Q5BKZ1 582 aaKnown RBP16.67■□□□□ 0.26
UBE2A-201ENST00000346330 C19orf44Q9H6X5 657 aa16.67■□□□□ 0.26
UBE2A-201ENST00000346330 CLTCL1P53675 1640 aa16.67■□□□□ 0.26
UBE2A-201ENST00000346330 TRPM2O94759 1503 aa16.66■□□□□ 0.26
UBE2A-201ENST00000346330 SPHKAPQ2M3C7 1700 aa16.66■□□□□ 0.26
UBE2A-201ENST00000346330 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
UBE2A-201ENST00000346330 JCADQ9P266 1359 aa16.64■□□□□ 0.26
UBE2A-201ENST00000346330 CADPS2Q86UW7 1296 aa16.64■□□□□ 0.25
UBE2A-201ENST00000346330 SHPRHQ149N8 1683 aa16.64■□□□□ 0.25
UBE2A-201ENST00000346330 NEXMIFQ5QGS0 1516 aa16.64■□□□□ 0.25
UBE2A-201ENST00000346330 ATF3P18847 181 aa16.63■□□□□ 0.25
UBE2A-201ENST00000346330 BRINP3Q76B58 766 aa16.63■□□□□ 0.25
UBE2A-201ENST00000346330 NALCNQ8IZF0 1738 aa16.61■□□□□ 0.25
UBE2A-201ENST00000346330 HFM1A2PYH4 1435 aa16.61■□□□□ 0.25
UBE2A-201ENST00000346330 TRIM52Q96A61 297 aa16.6■□□□□ 0.25
UBE2A-201ENST00000346330 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
UBE2A-201ENST00000346330 DDX17Q92841 729 aaKnown RBP16.59■□□□□ 0.25
UBE2A-201ENST00000346330 MST1RQ04912 1400 aa16.59■□□□□ 0.25
UBE2A-201ENST00000346330 NHSL1Q5SYE7 1610 aa16.59■□□□□ 0.25
UBE2A-201ENST00000346330 DCCP43146 1447 aa16.57■□□□□ 0.24
UBE2A-201ENST00000346330 MSH5O43196 834 aa16.57■□□□□ 0.24
UBE2A-201ENST00000346330 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
UBE2A-201ENST00000346330 ADGRL3Q9HAR2 1447 aa16.55■□□□□ 0.24
UBE2A-201ENST00000346330 ROBO2Q9HCK4 1378 aa16.54■□□□□ 0.24
UBE2A-201ENST00000346330 SPATA31A6Q5VVP1 1343 aa16.54■□□□□ 0.24
UBE2A-201ENST00000346330 NUTM2BA6NNL0 878 aaPredicted RBP16.53■□□□□ 0.24
UBE2A-201ENST00000346330 NUTM2EB1AL46 878 aaPredicted RBP16.53■□□□□ 0.24
UBE2A-201ENST00000346330 NUTM2AQ8IVF1 878 aaPredicted RBP16.53■□□□□ 0.24
UBE2A-201ENST00000346330 MEX3CQ5U5Q3 659 aaKnown RBP16.51■□□□□ 0.23
UBE2A-201ENST00000346330 VGFO15240 615 aaPredicted RBP16.5■□□□□ 0.23
UBE2A-201ENST00000346330 SETD5Q9C0A6 1442 aa16.5■□□□□ 0.23
UBE2A-201ENST00000346330 C1orf167Q5SNV9 1468 aa16.49■□□□□ 0.23
UBE2A-201ENST00000346330 PTCH1Q13635 1447 aa16.49■□□□□ 0.23
UBE2A-201ENST00000346330 ADGRF5Q8IZF2 1346 aa16.48■□□□□ 0.23
UBE2A-201ENST00000346330 ORAI2Q96SN7 254 aa16.48■□□□□ 0.23
UBE2A-201ENST00000346330 KIF1BO60333 1816 aa16.47■□□□□ 0.23
UBE2A-201ENST00000346330 LAMC1P11047 1609 aa16.47■□□□□ 0.23
UBE2A-201ENST00000346330 PNPLA6Q8IY17 1366 aa16.47■□□□□ 0.23
UBE2A-201ENST00000346330 RPGRIP1LQ68CZ1 1315 aa16.46■□□□□ 0.23
UBE2A-201ENST00000346330 PRAG1Q86YV5 1406 aa16.45■□□□□ 0.22
UBE2A-201ENST00000346330 RGL3Q3MIN7 710 aa16.45■□□□□ 0.22
UBE2A-201ENST00000346330 RGS12O14924 1447 aa16.45■□□□□ 0.22
UBE2A-201ENST00000346330 SPATA31E1Q6ZUB1 1445 aa16.45■□□□□ 0.22
UBE2A-201ENST00000346330 AFF2P51816 1311 aa16.45■□□□□ 0.22
UBE2A-201ENST00000346330 PPLO60437 1756 aa16.44■□□□□ 0.22
UBE2A-201ENST00000346330 ZNF772Q68DY9 489 aaPredicted RBP16.44■□□□□ 0.22
UBE2A-201ENST00000346330 LRRC59Q96AG4 307 aaKnown RBP16.44■□□□□ 0.22
UBE2A-201ENST00000346330 MPHOSPH9Q99550 1183 aa16.44■□□□□ 0.22
UBE2A-201ENST00000346330 UPF1Q92900 1129 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBE2A-201ENST00000346330 CCDC144AA2RUR9 1427 aa16.42■□□□□ 0.22
UBE2A-201ENST00000346330 SRCAPQ6ZRS2 3230 aa16.41■□□□□ 0.22
UBE2A-201ENST00000346330 WAPLQ7Z5K2 1190 aa16.41■□□□□ 0.22
UBE2A-201ENST00000346330 C8orf37Q96NL8 207 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms