RNA–Protein interactions for RNA: ENST00000345425.6

GIPC1-201, Transcript of GIPC PDZ domain containing family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIPC1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-201ENST00000345425 IFT172Q9UG01 1749 aa40.02■■■■■ 4
GIPC1-201ENST00000345425 HDGFP51858 240 aaKnown RBP40.02■■■■■ 4
GIPC1-201ENST00000345425 RIMS2Q9UQ26 1411 aa40.01■■■■■ 4
GIPC1-201ENST00000345425 ARHGAP23Q9P227 1491 aa40.01■■■■■ 4
GIPC1-201ENST00000345425 DCAF11Q8TEB1 546 aa40.01■■■■■ 4
GIPC1-201ENST00000345425 STAC3Q96MF2 364 aa40■■■■□ 3.99
GIPC1-201ENST00000345425 ZFYVE9O95405 1425 aa40■■■■□ 3.99
GIPC1-201ENST00000345425 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.98■■■■□ 3.99
GIPC1-201ENST00000345425 EID1Q9Y6B2 187 aa39.95■■■■□ 3.99
GIPC1-201ENST00000345425 VGFO15240 615 aaPredicted RBP39.95■■■■□ 3.99
GIPC1-201ENST00000345425 MYOM2P54296 1465 aa39.94■■■■□ 3.98
GIPC1-201ENST00000345425 AEBP2Q6ZN18 517 aaPredicted RBP39.94■■■■□ 3.98
GIPC1-201ENST00000345425 KDM2AQ9Y2K7 1162 aa39.93■■■■□ 3.98
GIPC1-201ENST00000345425 PPP1R15AO75807 674 aaPredicted RBP39.9■■■■□ 3.98
GIPC1-201ENST00000345425 TXNDC2Q86VQ3 553 aa39.89■■■■□ 3.98
GIPC1-201ENST00000345425 NUTM2DQ5VT03 806 aaPredicted RBP39.89■■■■□ 3.98
GIPC1-201ENST00000345425 ANKLE2Q86XL3 938 aa39.89■■■■□ 3.98
GIPC1-201ENST00000345425 SCAF11Q99590 1463 aaKnown RBP39.88■■■■□ 3.97
GIPC1-201ENST00000345425 ZEB1P37275 1124 aaPredicted RBP39.88■■■■□ 3.97
GIPC1-201ENST00000345425 LTKP29376 864 aa39.86■■■■□ 3.97
GIPC1-201ENST00000345425 HSPA2P54652 639 aa39.86■■■■□ 3.97
GIPC1-201ENST00000345425 NRXN1Q9ULB1 1477 aa39.83■■■■□ 3.97
GIPC1-201ENST00000345425 ADGRF5Q8IZF2 1346 aa39.83■■■■□ 3.97
GIPC1-201ENST00000345425 POLR1AO95602 1720 aaPredicted RBP39.82■■■■□ 3.97
GIPC1-201ENST00000345425 PRAG1Q86YV5 1406 aa39.8■■■■□ 3.96
GIPC1-201ENST00000345425 PLEKHG1Q9ULL1 1385 aa39.78■■■■□ 3.96
GIPC1-201ENST00000345425 PIK3C2GO75747 1445 aa39.78■■■■□ 3.96
GIPC1-201ENST00000345425 MED14O60244 1454 aa39.73■■■■□ 3.95
GIPC1-201ENST00000345425 SETBP1Q9Y6X0 1596 aa39.72■■■■□ 3.95
GIPC1-201ENST00000345425 NCKAP5LQ9HCH0 1330 aa39.72■■■■□ 3.95
GIPC1-201ENST00000345425 BCANQ96GW7 911 aa39.71■■■■□ 3.95
GIPC1-201ENST00000345425 NBPF8Q3BBV2 869 aa39.69■■■■□ 3.94
GIPC1-201ENST00000345425 NPHP4O75161 1426 aaPredicted RBP39.68■■■■□ 3.94
GIPC1-201ENST00000345425 LAMC1P11047 1609 aa39.67■■■■□ 3.94
GIPC1-201ENST00000345425 IQGAP1P46940 1657 aa39.67■■■■□ 3.94
GIPC1-201ENST00000345425 NRXN3Q9Y4C0 1643 aa39.67■■■■□ 3.94
GIPC1-201ENST00000345425 STRCQ7RTU9 1775 aa39.66■■■■□ 3.94
GIPC1-201ENST00000345425 KIAA1210Q9ULL0 1709 aa39.65■■■■□ 3.94
GIPC1-201ENST00000345425 SENP3Q9H4L4 574 aaPredicted RBP39.64■■■■□ 3.94
GIPC1-201ENST00000345425 C14orf93Q9H972 538 aaKnown RBP39.63■■■■□ 3.93
GIPC1-201ENST00000345425 TRPM1Q7Z4N2 1603 aa39.63■■■■□ 3.93
GIPC1-201ENST00000345425 ALKQ9UM73 1620 aa39.63■■■■□ 3.93
GIPC1-201ENST00000345425 DIP2AQ14689 1571 aa39.61■■■■□ 3.93
GIPC1-201ENST00000345425 ADAMTS13Q76LX8 1427 aa39.6■■■■□ 3.93
GIPC1-201ENST00000345425 CFAP70Q5T0N1 1121 aa39.6■■■■□ 3.93
GIPC1-201ENST00000345425 RALGAPBQ86X10 1494 aa39.58■■■■□ 3.93
GIPC1-201ENST00000345425 SETD1AO15047 1707 aaKnown RBP39.55■■■■□ 3.92
GIPC1-201ENST00000345425 SLC26A8Q96RN1 970 aa39.55■■■■□ 3.92
GIPC1-201ENST00000345425 TBX22Q9Y458 520 aa39.55■■■■□ 3.92
GIPC1-201ENST00000345425 ROCK2O75116 1388 aaKnown RBP39.53■■■■□ 3.92
GIPC1-201ENST00000345425 DMRT2Q9Y5R5 561 aa39.51■■■■□ 3.92
GIPC1-201ENST00000345425 NBPF1Q3BBV0 1214 aa39.49■■■■□ 3.91
GIPC1-201ENST00000345425 ADGRB1O14514 1584 aa39.47■■■■□ 3.91
GIPC1-201ENST00000345425 GPRASP1Q5JY77 1395 aa39.46■■■■□ 3.91
GIPC1-201ENST00000345425 METP08581 1390 aa39.45■■■■□ 3.91
GIPC1-201ENST00000345425 ASXL1Q8IXJ9 1541 aa39.45■■■■□ 3.91
GIPC1-201ENST00000345425 PIK3R4Q99570 1358 aa39.44■■■■□ 3.9
GIPC1-201ENST00000345425 TMEM132EQ6IEE7 984 aa39.44■■■■□ 3.9
GIPC1-201ENST00000345425 CARD11Q9BXL7 1154 aa39.41■■■■□ 3.9
GIPC1-201ENST00000345425 YTHDC2Q9H6S0 1430 aaKnown RBP39.37■■■■□ 3.89
GIPC1-201ENST00000345425 LRPPRCP42704 1394 aaKnown RBP39.34■■■■□ 3.89
GIPC1-201ENST00000345425 CHD2O14647 1828 aaKnown RBP39.33■■■■□ 3.89
GIPC1-201ENST00000345425 PTPRUQ92729 1446 aa39.31■■■■□ 3.88
GIPC1-201ENST00000345425 STK26Q9P289 416 aa39.3■■■■□ 3.88
GIPC1-201ENST00000345425 ABCC11Q96J66 1382 aa39.3■■■■□ 3.88
GIPC1-201ENST00000345425 KNDC1Q76NI1 1749 aa39.29■■■■□ 3.88
GIPC1-201ENST00000345425 AMOTL2Q9Y2J4 779 aa39.28■■■■□ 3.88
GIPC1-201ENST00000345425 XRN1Q8IZH2 1706 aaKnown RBP39.27■■■■□ 3.88
GIPC1-201ENST00000345425 KCNA6P17658 529 aa39.27■■■■□ 3.88
GIPC1-201ENST00000345425 TRAK1Q9UPV9 953 aa39.27■■■■□ 3.88
GIPC1-201ENST00000345425 TECPR2O15040 1411 aa39.27■■■■□ 3.88
GIPC1-201ENST00000345425 NWD1Q149M9 1564 aa39.27■■■■□ 3.88
GIPC1-201ENST00000345425 EIF3AQ14152 1382 aaKnown RBP39.25■■■■□ 3.87
GIPC1-201ENST00000345425 DLC1Q96QB1 1528 aa39.24■■■■□ 3.87
GIPC1-201ENST00000345425 USP47Q96K76 1375 aa39.23■■■■□ 3.87
GIPC1-201ENST00000345425 CPS1P31327 1500 aa39.23■■■■□ 3.87
GIPC1-201ENST00000345425 ARHGEF28Q8N1W1 1705 aaKnown RBP39.21■■■■□ 3.87
GIPC1-201ENST00000345425 PTCH1Q13635 1447 aa39.2■■■■□ 3.87
GIPC1-201ENST00000345425 EIF4G2P78344 907 aaKnown RBP eCLIP39.19■■■■□ 3.86
GIPC1-201ENST00000345425 SIRT1Q96EB6 747 aa39.18■■■■□ 3.86
GIPC1-201ENST00000345425 NKTRP30414 1462 aaKnown RBP39.17■■■■□ 3.86
GIPC1-201ENST00000345425 FAM135BQ49AJ0 1406 aa39.17■■■■□ 3.86
GIPC1-201ENST00000345425 ROBO2Q9HCK4 1378 aa39.14■■■■□ 3.86
GIPC1-201ENST00000345425 ZNF335Q9H4Z2 1342 aaPredicted RBP39.14■■■■□ 3.86
GIPC1-201ENST00000345425 STRCP1A6NGW2 1772 aa39.14■■■■□ 3.86
GIPC1-201ENST00000345425 POGKQ9P215 609 aa39.12■■■■□ 3.85
GIPC1-201ENST00000345425 PRAM1Q96QH2 718 aa39.11■■■■□ 3.85
GIPC1-201ENST00000345425 CENPJQ9HC77 1338 aaPredicted RBP39.11■■■■□ 3.85
GIPC1-201ENST00000345425 HSPA5P11021 654 aaKnown RBP39.08■■■■□ 3.85
GIPC1-201ENST00000345425 ST20-MTHFSA0A0A6YYL1 179 aa39.08■■■■□ 3.85
GIPC1-201ENST00000345425 WAPLQ7Z5K2 1190 aa39.06■■■■□ 3.84
GIPC1-201ENST00000345425 PROSER2Q86WR7 435 aaPredicted RBP39.04■■■■□ 3.84
GIPC1-201ENST00000345425 QRICH2Q9H0J4 1663 aa39.04■■■■□ 3.84
GIPC1-201ENST00000345425 PLEKHH1Q9ULM0 1364 aa39.04■■■■□ 3.84
GIPC1-201ENST00000345425 SAFB2Q14151 953 aaKnown RBP eCLIP39.02■■■■□ 3.84
GIPC1-201ENST00000345425 SBNO2Q9Y2G9 1366 aa39■■■■□ 3.83
GIPC1-201ENST00000345425 SLC24A1O60721 1099 aa38.97■■■■□ 3.83
GIPC1-201ENST00000345425 NCOA3Q9Y6Q9 1424 aa38.96■■■■□ 3.83
GIPC1-201ENST00000345425 LTBP4Q8N2S1 1624 aa38.95■■■■□ 3.83
GIPC1-201ENST00000345425 LRRC7Q96NW7 1537 aa38.95■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms