RNA–Protein interactions for RNA: ENST00000345094.7

THUMPD3-201, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene THUMPD3, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-201ENST00000345094 KDM6BO15054 1643 aa13.42□□□□□ -0.26
THUMPD3-201ENST00000345094 DDX49Q9Y6V7 483 aaKnown RBP13.42□□□□□ -0.26
THUMPD3-201ENST00000345094 ERCC6Q03468 1493 aa13.42□□□□□ -0.26
THUMPD3-201ENST00000345094 PANK2Q9BZ23 570 aa13.41□□□□□ -0.26
THUMPD3-201ENST00000345094 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
THUMPD3-201ENST00000345094 UGGT2Q9NYU1 1516 aa13.41□□□□□ -0.26
THUMPD3-201ENST00000345094 ERBINQ96RT1 1412 aa13.41□□□□□ -0.26
THUMPD3-201ENST00000345094 SPAG9O60271 1321 aaKnown RBP13.4□□□□□ -0.26
THUMPD3-201ENST00000345094 AFAP1Q8N556 730 aa13.4□□□□□ -0.26
THUMPD3-201ENST00000345094 TBC1D2Q9BYX2 928 aa13.4□□□□□ -0.26
THUMPD3-201ENST00000345094 DNMBPQ6XZF7 1577 aa13.4□□□□□ -0.26
THUMPD3-201ENST00000345094 C1orf115Q9H7X2 142 aa13.39□□□□□ -0.27
THUMPD3-201ENST00000345094 PER1O15534 1290 aaPredicted RBP13.39□□□□□ -0.27
THUMPD3-201ENST00000345094 PLEKHH1Q9ULM0 1364 aa13.39□□□□□ -0.27
THUMPD3-201ENST00000345094 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
THUMPD3-201ENST00000345094 WASHC2CQ9Y4E1 1318 aa13.39□□□□□ -0.27
THUMPD3-201ENST00000345094 TROQ12816 1431 aaPredicted RBP13.39□□□□□ -0.27
THUMPD3-201ENST00000345094 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.39□□□□□ -0.27
THUMPD3-201ENST00000345094 PLB1Q6P1J6 1458 aa13.38□□□□□ -0.27
THUMPD3-201ENST00000345094 MCM4P33991 863 aa13.38□□□□□ -0.27
THUMPD3-201ENST00000345094 WWC1Q8IX03 1113 aa13.38□□□□□ -0.27
THUMPD3-201ENST00000345094 RUNDC1Q96C34 613 aa13.38□□□□□ -0.27
THUMPD3-201ENST00000345094 SPATA31E1Q6ZUB1 1445 aa13.38□□□□□ -0.27
THUMPD3-201ENST00000345094 IPO8O15397 1037 aaKnown RBP13.38□□□□□ -0.27
THUMPD3-201ENST00000345094 CAMSAP2Q08AD1 1489 aa13.37□□□□□ -0.27
THUMPD3-201ENST00000345094 EXOSC9Q06265 439 aaKnown RBP13.37□□□□□ -0.27
THUMPD3-201ENST00000345094 GGNBP2Q9H3C7 697 aa13.37□□□□□ -0.27
THUMPD3-201ENST00000345094 PDE3AQ14432 1141 aa13.37□□□□□ -0.27
THUMPD3-201ENST00000345094 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
THUMPD3-201ENST00000345094 TEX14Q8IWB6 1497 aa13.37□□□□□ -0.27
THUMPD3-201ENST00000345094 DDX11L8A8MPP1 907 aa13.37□□□□□ -0.27
THUMPD3-201ENST00000345094 CALD1Q05682 793 aaKnown RBP13.36□□□□□ -0.27
THUMPD3-201ENST00000345094 RSPH4AQ5TD94 716 aa13.36□□□□□ -0.27
THUMPD3-201ENST00000345094 LRPPRCP42704 1394 aaKnown RBP13.36□□□□□ -0.27
THUMPD3-201ENST00000345094 PCDHB15Q9Y5E8 787 aa13.36□□□□□ -0.27
THUMPD3-201ENST00000345094 EIF3AQ14152 1382 aaKnown RBP13.35□□□□□ -0.27
THUMPD3-201ENST00000345094 FAM13BQ9NYF5 915 aa13.35□□□□□ -0.27
THUMPD3-201ENST00000345094 MAGI3Q5TCQ9 1506 aa13.35□□□□□ -0.27
THUMPD3-201ENST00000345094 RIPK4P57078 832 aa13.35□□□□□ -0.27
THUMPD3-201ENST00000345094 MPNDQ8N594 471 aa13.35□□□□□ -0.27
THUMPD3-201ENST00000345094 KANK1Q14678 1352 aa13.35□□□□□ -0.27
THUMPD3-201ENST00000345094 PARD3Q8TEW0 1356 aa13.34□□□□□ -0.27
THUMPD3-201ENST00000345094 PTPRGP23470 1445 aa13.34□□□□□ -0.27
THUMPD3-201ENST00000345094 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
THUMPD3-201ENST00000345094 CC2D2AQ9P2K1 1620 aa13.34□□□□□ -0.27
THUMPD3-201ENST00000345094 NPM1P06748 294 aaKnown RBP eCLIP13.34□□□□□ -0.27
THUMPD3-201ENST00000345094 RBM10P98175 930 aaKnown RBP13.34□□□□□ -0.27
THUMPD3-201ENST00000345094 TESK2Q96S53 571 aa13.34□□□□□ -0.27
THUMPD3-201ENST00000345094 URB2Q14146 1524 aaKnown RBP13.33□□□□□ -0.27
THUMPD3-201ENST00000345094 CABP2Q9NPB3 220 aa13.33□□□□□ -0.28
THUMPD3-201ENST00000345094 MRE11P49959 708 aa13.33□□□□□ -0.28
THUMPD3-201ENST00000345094 CASC1Q6TDU7 716 aa13.33□□□□□ -0.28
THUMPD3-201ENST00000345094 RRAGDQ9NQL2 400 aaPredicted RBP13.32□□□□□ -0.28
THUMPD3-201ENST00000345094 RARSP54136 660 aaKnown RBP13.32□□□□□ -0.28
THUMPD3-201ENST00000345094 DDX19BQ9UMR2 479 aa13.32□□□□□ -0.28
THUMPD3-201ENST00000345094 HMOX1P09601 288 aa13.32□□□□□ -0.28
THUMPD3-201ENST00000345094 RLBP1P12271 317 aa13.32□□□□□ -0.28
THUMPD3-201ENST00000345094 XRCC6P12956 609 aaKnown RBP eCLIP13.32□□□□□ -0.28
THUMPD3-201ENST00000345094 MCTP1Q6DN14 999 aa13.32□□□□□ -0.28
THUMPD3-201ENST00000345094 GRPEL1Q9HAV7 217 aa13.31□□□□□ -0.28
THUMPD3-201ENST00000345094 NOB1Q9ULX3 412 aaKnown RBP13.31□□□□□ -0.28
THUMPD3-201ENST00000345094 MINK1Q8N4C8 1332 aaPredicted RBP13.31□□□□□ -0.28
THUMPD3-201ENST00000345094 PZPP20742 1482 aa13.31□□□□□ -0.28
THUMPD3-201ENST00000345094 SLC4A10Q6U841 1118 aa13.31□□□□□ -0.28
THUMPD3-201ENST00000345094 RNF214Q8ND24 703 aa13.3□□□□□ -0.28
THUMPD3-201ENST00000345094 KDM2BQ8NHM5 1336 aa13.3□□□□□ -0.28
THUMPD3-201ENST00000345094 IQGAP2Q13576 1575 aa13.3□□□□□ -0.28
THUMPD3-201ENST00000345094 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
THUMPD3-201ENST00000345094 NUTM2FA1L443 756 aa13.3□□□□□ -0.28
THUMPD3-201ENST00000345094 CUL7Q14999 1698 aa13.29□□□□□ -0.28
THUMPD3-201ENST00000345094 ESPNB1AK53 854 aa13.29□□□□□ -0.28
THUMPD3-201ENST00000345094 DENND4BO75064 1496 aaPredicted RBP13.29□□□□□ -0.28
THUMPD3-201ENST00000345094 MVPQ14764 893 aaKnown RBP13.29□□□□□ -0.28
THUMPD3-201ENST00000345094 CAVIN1Q6NZI2 390 aaKnown RBP13.28□□□□□ -0.28
THUMPD3-201ENST00000345094 TAOK2Q9UL54 1235 aa13.28□□□□□ -0.28
THUMPD3-201ENST00000345094 R3HCC1Q9Y3T6 440 aaKnown RBP13.28□□□□□ -0.28
THUMPD3-201ENST00000345094 NASPP49321 788 aaPredicted RBP13.28□□□□□ -0.28
THUMPD3-201ENST00000345094 PKNOX2Q96KN3 472 aa13.27□□□□□ -0.28
THUMPD3-201ENST00000345094 NKTRP30414 1462 aaKnown RBP13.27□□□□□ -0.29
THUMPD3-201ENST00000345094 TCOF1Q13428 1488 aaKnown RBP13.27□□□□□ -0.29
THUMPD3-201ENST00000345094 RALGAPBQ86X10 1494 aa13.27□□□□□ -0.29
THUMPD3-201ENST00000345094 GPATCH8Q9UKJ3 1502 aaKnown RBP13.27□□□□□ -0.29
THUMPD3-201ENST00000345094 TMEM57Q8N5G2 664 aa13.26□□□□□ -0.29
THUMPD3-201ENST00000345094 TBC1D32Q96NH3 1257 aa13.26□□□□□ -0.29
THUMPD3-201ENST00000345094 THUMPD2Q9BTF0 503 aaKnown RBP13.26□□□□□ -0.29
THUMPD3-201ENST00000345094 UBE2Q2Q8WVN8 375 aa13.26□□□□□ -0.29
THUMPD3-201ENST00000345094 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
THUMPD3-201ENST00000345094 TRIM6-TRIM34B2RNG4 842 aa13.25□□□□□ -0.29
THUMPD3-201ENST00000345094 C14orf37Q86TY3 774 aa13.25□□□□□ -0.29
THUMPD3-201ENST00000345094 SSH1Q8WYL5 1049 aa13.25□□□□□ -0.29
THUMPD3-201ENST00000345094 MLECQ14165 292 aa13.25□□□□□ -0.29
THUMPD3-201ENST00000345094 BCL11BQ9C0K0 894 aaPredicted RBP13.25□□□□□ -0.29
THUMPD3-201ENST00000345094 HDGFL2Q7Z4V5 671 aaPredicted RBP13.24□□□□□ -0.29
THUMPD3-201ENST00000345094 ATF7IPQ6VMQ6 1270 aa13.23□□□□□ -0.29
THUMPD3-201ENST00000345094 ZNF608Q9ULD9 1512 aaPredicted RBP13.23□□□□□ -0.29
THUMPD3-201ENST00000345094 CTTNBP2Q8WZ74 1663 aa13.23□□□□□ -0.29
THUMPD3-201ENST00000345094 NUP153P49790 1475 aaKnown RBP13.23□□□□□ -0.29
THUMPD3-201ENST00000345094 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
THUMPD3-201ENST00000345094 CHMP4BQ9H444 224 aaKnown RBP13.23□□□□□ -0.29
THUMPD3-201ENST00000345094 PRPF40AO75400 957 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms