RNA–Protein interactions for RNA: ENST00000344935.8

CPSF4L-201, Transcript of cleavage and polyadenylation specific factor 4 like, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPSF4L, Length 647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4L-201ENST00000344935 IDI1Q13907 227 aa12.86□□□□□ -0.35
CPSF4L-201ENST00000344935 ANKRD50Q9ULJ7 1429 aa12.86□□□□□ -0.35
CPSF4L-201ENST00000344935 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
CPSF4L-201ENST00000344935 E9PCH4 1651 aa12.85□□□□□ -0.35
CPSF4L-201ENST00000344935 COL16A1Q07092 1604 aaPredicted RBP12.84□□□□□ -0.35
CPSF4L-201ENST00000344935 LOC105371045A0A1W2PR82 267 aa12.83□□□□□ -0.36
CPSF4L-201ENST00000344935 AHDC1Q5TGY3 1603 aaPredicted RBP12.83□□□□□ -0.36
CPSF4L-201ENST00000344935 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
CPSF4L-201ENST00000344935 PIK3R4Q99570 1358 aa12.82□□□□□ -0.36
CPSF4L-201ENST00000344935 APLP2Q06481 763 aa12.82□□□□□ -0.36
CPSF4L-201ENST00000344935 SHPRHQ149N8 1683 aa12.82□□□□□ -0.36
CPSF4L-201ENST00000344935 MSH6P52701 1360 aa12.81□□□□□ -0.36
CPSF4L-201ENST00000344935 RGS17Q9UGC6 210 aaPredicted RBP12.81□□□□□ -0.36
CPSF4L-201ENST00000344935 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
CPSF4L-201ENST00000344935 RIMS2Q9UQ26 1411 aa12.8□□□□□ -0.36
CPSF4L-201ENST00000344935 XRN1Q8IZH2 1706 aaKnown RBP12.8□□□□□ -0.36
CPSF4L-201ENST00000344935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.8□□□□□ -0.36
CPSF4L-201ENST00000344935 DCCP43146 1447 aa12.79□□□□□ -0.36
CPSF4L-201ENST00000344935 TRPM2O94759 1503 aa12.79□□□□□ -0.36
CPSF4L-201ENST00000344935 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.79□□□□□ -0.36
CPSF4L-201ENST00000344935 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
CPSF4L-201ENST00000344935 SETBP1Q9Y6X0 1596 aa12.78□□□□□ -0.36
CPSF4L-201ENST00000344935 NRXN3Q9Y4C0 1643 aa12.77□□□□□ -0.36
CPSF4L-201ENST00000344935 SPHKAPQ2M3C7 1700 aa12.77□□□□□ -0.36
CPSF4L-201ENST00000344935 JCADQ9P266 1359 aa12.77□□□□□ -0.37
CPSF4L-201ENST00000344935 HDGFP51858 240 aaKnown RBP12.76□□□□□ -0.37
CPSF4L-201ENST00000344935 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
CPSF4L-201ENST00000344935 SLC26A8Q96RN1 970 aa12.76□□□□□ -0.37
CPSF4L-201ENST00000344935 TBX22Q9Y458 520 aa12.76□□□□□ -0.37
CPSF4L-201ENST00000344935 SETD1AO15047 1707 aaKnown RBP12.75□□□□□ -0.37
CPSF4L-201ENST00000344935 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.75□□□□□ -0.37
CPSF4L-201ENST00000344935 CHIC2Q9UKJ5 165 aa12.75□□□□□ -0.37
CPSF4L-201ENST00000344935 NHSL1Q5SYE7 1610 aa12.74□□□□□ -0.37
CPSF4L-201ENST00000344935 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
CPSF4L-201ENST00000344935 SPATA31A6Q5VVP1 1343 aa12.73□□□□□ -0.37
CPSF4L-201ENST00000344935 LAMC1P11047 1609 aa12.73□□□□□ -0.37
CPSF4L-201ENST00000344935 LRP6O75581 1613 aa12.72□□□□□ -0.37
CPSF4L-201ENST00000344935 CDK12Q9NYV4 1490 aaPredicted RBP12.71□□□□□ -0.38
CPSF4L-201ENST00000344935 PRAG1Q86YV5 1406 aa12.71□□□□□ -0.38
CPSF4L-201ENST00000344935 POTEAQ6S8J7 498 aa12.7□□□□□ -0.38
CPSF4L-201ENST00000344935 ASXL1Q8IXJ9 1541 aa12.69□□□□□ -0.38
CPSF4L-201ENST00000344935 PPP1R15AO75807 674 aaPredicted RBP12.69□□□□□ -0.38
CPSF4L-201ENST00000344935 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
CPSF4L-201ENST00000344935 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
CPSF4L-201ENST00000344935 C19orf44Q9H6X5 657 aa12.68□□□□□ -0.38
CPSF4L-201ENST00000344935 NALCNQ8IZF0 1738 aa12.68□□□□□ -0.38
CPSF4L-201ENST00000344935 NEXMIFQ5QGS0 1516 aa12.67□□□□□ -0.38
CPSF4L-201ENST00000344935 SENP3Q9H4L4 574 aaPredicted RBP12.67□□□□□ -0.38
CPSF4L-201ENST00000344935 PTPRUQ92729 1446 aa12.67□□□□□ -0.38
CPSF4L-201ENST00000344935 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
CPSF4L-201ENST00000344935 CLTCL1P53675 1640 aa12.66□□□□□ -0.38
CPSF4L-201ENST00000344935 KIF1BO60333 1816 aa12.66□□□□□ -0.38
CPSF4L-201ENST00000344935 MST1RQ04912 1400 aa12.65□□□□□ -0.38
CPSF4L-201ENST00000344935 ADGRL3Q9HAR2 1447 aa12.65□□□□□ -0.38
CPSF4L-201ENST00000344935 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
CPSF4L-201ENST00000344935 PTCH1Q13635 1447 aa12.64□□□□□ -0.39
CPSF4L-201ENST00000344935 NUP155O75694 1391 aa12.64□□□□□ -0.39
CPSF4L-201ENST00000344935 BCANQ96GW7 911 aa12.63□□□□□ -0.39
CPSF4L-201ENST00000344935 ATF3P18847 181 aa12.62□□□□□ -0.39
CPSF4L-201ENST00000344935 ZNF772Q68DY9 489 aaPredicted RBP12.62□□□□□ -0.39
CPSF4L-201ENST00000344935 BRINP3Q76B58 766 aa12.61□□□□□ -0.39
CPSF4L-201ENST00000344935 COL22A1Q8NFW1 1626 aaPredicted RBP12.6□□□□□ -0.39
CPSF4L-201ENST00000344935 AMOTL2Q9Y2J4 779 aa12.6□□□□□ -0.39
CPSF4L-201ENST00000344935 PPLO60437 1756 aa12.6□□□□□ -0.39
CPSF4L-201ENST00000344935 RRBP1Q9P2E9 1410 aaKnown RBP12.59□□□□□ -0.39
CPSF4L-201ENST00000344935 METP08581 1390 aa12.58□□□□□ -0.4
CPSF4L-201ENST00000344935 C14orf37Q86TY3 774 aa12.58□□□□□ -0.4
CPSF4L-201ENST00000344935 CDC42BPGQ6DT37 1551 aa12.57□□□□□ -0.4
CPSF4L-201ENST00000344935 PNPLA6Q8IY17 1366 aa12.56□□□□□ -0.4
CPSF4L-201ENST00000344935 NAIPQ13075 1403 aa12.56□□□□□ -0.4
CPSF4L-201ENST00000344935 CHGAP10645 457 aaKnown RBP12.56□□□□□ -0.4
CPSF4L-201ENST00000344935 C1orf167Q5SNV9 1468 aa12.55□□□□□ -0.4
CPSF4L-201ENST00000344935 MARF1Q9Y4F3 1742 aaKnown RBP12.55□□□□□ -0.4
CPSF4L-201ENST00000344935 HFM1A2PYH4 1435 aa12.54□□□□□ -0.4
CPSF4L-201ENST00000344935 IFT172Q9UG01 1749 aa12.54□□□□□ -0.4
CPSF4L-201ENST00000344935 MEX3CQ5U5Q3 659 aaKnown RBP12.54□□□□□ -0.4
CPSF4L-201ENST00000344935 KNDC1Q76NI1 1749 aa12.54□□□□□ -0.4
CPSF4L-201ENST00000344935 EP400Q96L91 3159 aa12.53□□□□□ -0.4
CPSF4L-201ENST00000344935 NUTM2DQ5VT03 806 aaPredicted RBP12.53□□□□□ -0.4
CPSF4L-201ENST00000344935 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPSF4L-201ENST00000344935 LRRC59Q96AG4 307 aaKnown RBP12.53□□□□□ -0.4
CPSF4L-201ENST00000344935 RGS12O14924 1447 aa12.53□□□□□ -0.4
CPSF4L-201ENST00000344935 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.52□□□□□ -0.41
CPSF4L-201ENST00000344935 RXRBP28702 533 aa12.51□□□□□ -0.41
CPSF4L-201ENST00000344935 TECPR2O15040 1411 aa12.51□□□□□ -0.41
CPSF4L-201ENST00000344935 AFF2P51816 1311 aa12.5□□□□□ -0.41
CPSF4L-201ENST00000344935 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
CPSF4L-201ENST00000344935 RPGRIP1LQ68CZ1 1315 aa12.5□□□□□ -0.41
CPSF4L-201ENST00000344935 SRCAPQ6ZRS2 3230 aa12.49□□□□□ -0.41
CPSF4L-201ENST00000344935 MYOM2P54296 1465 aa12.49□□□□□ -0.41
CPSF4L-201ENST00000344935 ROBO2Q9HCK4 1378 aa12.49□□□□□ -0.41
CPSF4L-201ENST00000344935 KIF1AQ12756 1690 aa12.48□□□□□ -0.41
CPSF4L-201ENST00000344935 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
CPSF4L-201ENST00000344935 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
CPSF4L-201ENST00000344935 PXDNQ92626 1479 aa12.47□□□□□ -0.41
CPSF4L-201ENST00000344935 FMN2Q9NZ56 1722 aa12.46□□□□□ -0.41
CPSF4L-201ENST00000344935 RBM6P78332 1123 aaKnown RBP12.46□□□□□ -0.41
CPSF4L-201ENST00000344935 TRIM52Q96A61 297 aa12.45□□□□□ -0.42
CPSF4L-201ENST00000344935 ATRNO75882 1429 aa12.45□□□□□ -0.42
CPSF4L-201ENST00000344935 SPATA31E1Q6ZUB1 1445 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms