RNA–Protein interactions for RNA: ENST00000343523.6

DMD-202, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 5,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-202ENST00000343523 CUX1P39880 1505 aa8.19□□□□□ -1.1
DMD-202ENST00000343523 H3BQV1 296 aa8.19□□□□□ -1.1
DMD-202ENST00000343523 IFFO2Q5TF58 517 aa8.19□□□□□ -1.1
DMD-202ENST00000343523 TERF2IPQ9NYB0 399 aa8.19□□□□□ -1.1
DMD-202ENST00000343523 CREBRFQ8IUR6 639 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 HMGB2P26583 209 aaKnown RBP8.18□□□□□ -1.1
DMD-202ENST00000343523 BRPF3Q9ULD4 1205 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 RAD54L2Q9Y4B4 1467 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 PAK3O75914 559 aaPredicted RBP8.18□□□□□ -1.1
DMD-202ENST00000343523 SF3A1Q15459 793 aaKnown RBP8.18□□□□□ -1.1
DMD-202ENST00000343523 ANO8Q9HCE9 1232 aaPredicted RBP8.18□□□□□ -1.1
DMD-202ENST00000343523 GRIN2BQ13224 1484 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 PRXQ9BXM0 1461 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 IL27Q8NEV9 243 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 BECN2A8MW95 431 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 G3V3G9 751 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 MRE11P49959 708 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 GPS2Q13227 327 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 DCAF8Q5TAQ9 597 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 CCAR2Q8N163 923 aaKnown RBP8.18□□□□□ -1.1
DMD-202ENST00000343523 ZNF330Q9Y3S2 320 aaPredicted RBP8.18□□□□□ -1.1
DMD-202ENST00000343523 CCDC144AA2RUR9 1427 aa8.18□□□□□ -1.1
DMD-202ENST00000343523 WASHC2AQ641Q2 1341 aa8.17□□□□□ -1.1
DMD-202ENST00000343523 MCTP1Q6DN14 999 aa8.17□□□□□ -1.1
DMD-202ENST00000343523 GGT6Q6P531 493 aa8.17□□□□□ -1.1
DMD-202ENST00000343523 POLA1P09884 1462 aaPredicted RBP8.17□□□□□ -1.1
DMD-202ENST00000343523 WDR97A6NE52 1622 aa8.17□□□□□ -1.1
DMD-202ENST00000343523 CHMP3Q9Y3E7 222 aa8.17□□□□□ -1.1
DMD-202ENST00000343523 R3HCC1Q9Y3T6 440 aaKnown RBP8.17□□□□□ -1.1
DMD-202ENST00000343523 DDX19BQ9UMR2 479 aa8.16□□□□□ -1.1
DMD-202ENST00000343523 TEX35Q5T0J7 233 aa8.16□□□□□ -1.1
DMD-202ENST00000343523 MARCH6O60337 910 aa8.16□□□□□ -1.1
DMD-202ENST00000343523 TPM2P07951 284 aa8.16□□□□□ -1.1
DMD-202ENST00000343523 FAM184AQ8NB25 1140 aa8.16□□□□□ -1.1
DMD-202ENST00000343523 MSH5O43196 834 aa8.16□□□□□ -1.1
DMD-202ENST00000343523 TSR1Q2NL82 804 aaKnown RBP8.16□□□□□ -1.1
DMD-202ENST00000343523 PKNOX2Q96KN3 472 aa8.16□□□□□ -1.1
DMD-202ENST00000343523 HNRNPMP52272 730 aaKnown RBP eCLIP8.16□□□□□ -1.1
DMD-202ENST00000343523 SF3B2Q13435 895 aaKnown RBP8.16□□□□□ -1.1
DMD-202ENST00000343523 C22orf23Q9BZE7 217 aa8.16□□□□□ -1.1
DMD-202ENST00000343523 CCDC39Q9UFE4 941 aa8.16□□□□□ -1.1
DMD-202ENST00000343523 MYOM3Q5VTT5 1437 aa8.15□□□□□ -1.1
DMD-202ENST00000343523 REC8O95072 547 aa8.15□□□□□ -1.1
DMD-202ENST00000343523 NASPP49321 788 aaPredicted RBP8.15□□□□□ -1.1
DMD-202ENST00000343523 EFCAB2Q5VUJ9 269 aa8.15□□□□□ -1.1
DMD-202ENST00000343523 APAF1O14727 1248 aa8.15□□□□□ -1.1
DMD-202ENST00000343523 CASKIN1Q8WXD9 1431 aa8.15□□□□□ -1.1
DMD-202ENST00000343523 KIF7Q2M1P5 1343 aa8.15□□□□□ -1.1
DMD-202ENST00000343523 NUCB2P80303 420 aa8.15□□□□□ -1.11
DMD-202ENST00000343523 JPH4Q96JJ6 628 aa8.15□□□□□ -1.11
DMD-202ENST00000343523 LRRFIP1Q32MZ4 808 aaKnown RBP8.14□□□□□ -1.11
DMD-202ENST00000343523 DZIP1LQ8IYY4 767 aaKnown RBP8.14□□□□□ -1.11
DMD-202ENST00000343523 TIAM1Q13009 1591 aa8.14□□□□□ -1.11
DMD-202ENST00000343523 TPD52L1Q16890 204 aaPredicted RBP8.14□□□□□ -1.11
DMD-202ENST00000343523 TPM1P09493 284 aa8.14□□□□□ -1.11
DMD-202ENST00000343523 MTERF4Q7Z6M4 381 aaKnown RBP8.14□□□□□ -1.11
DMD-202ENST00000343523 MAP7D2Q96T17 732 aa8.14□□□□□ -1.11
DMD-202ENST00000343523 ABCA10Q8WWZ4 1543 aa8.14□□□□□ -1.11
DMD-202ENST00000343523 CCDC70Q6NSX1 233 aa8.14□□□□□ -1.11
DMD-202ENST00000343523 FYCO1Q9BQS8 1478 aa8.14□□□□□ -1.11
DMD-202ENST00000343523 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.14□□□□□ -1.11
DMD-202ENST00000343523 ANO2Q9NQ90 1003 aa8.14□□□□□ -1.11
DMD-202ENST00000343523 SMG6Q86US8 1419 aaKnown RBP8.13□□□□□ -1.11
DMD-202ENST00000343523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.13□□□□□ -1.11
DMD-202ENST00000343523 ELL2O00472 640 aaPredicted RBP8.13□□□□□ -1.11
DMD-202ENST00000343523 PES1O00541 588 aaKnown RBP8.13□□□□□ -1.11
DMD-202ENST00000343523 TRAK2O60296 914 aa8.13□□□□□ -1.11
DMD-202ENST00000343523 FRAT2O75474 233 aaPredicted RBP8.13□□□□□ -1.11
DMD-202ENST00000343523 GTF2E1P29083 439 aaPredicted RBP8.13□□□□□ -1.11
DMD-202ENST00000343523 TOMM22Q9NS69 142 aa8.13□□□□□ -1.11
DMD-202ENST00000343523 DIAPH3Q9NSV4 1193 aa8.13□□□□□ -1.11
DMD-202ENST00000343523 PDE4CQ08493 712 aa8.12□□□□□ -1.11
DMD-202ENST00000343523 RSPH4AQ5TD94 716 aa8.12□□□□□ -1.11
DMD-202ENST00000343523 INTS3Q68E01 1043 aaKnown RBP8.12□□□□□ -1.11
DMD-202ENST00000343523 IFT57Q9NWB7 429 aa8.12□□□□□ -1.11
DMD-202ENST00000343523 AQRO60306 1485 aaKnown RBP eCLIP8.12□□□□□ -1.11
DMD-202ENST00000343523 ROCK1Q13464 1354 aa8.12□□□□□ -1.11
DMD-202ENST00000343523 AKAP17AQ02040 695 aaKnown RBP8.12□□□□□ -1.11
DMD-202ENST00000343523 NUTM2DQ5VT03 806 aaPredicted RBP8.12□□□□□ -1.11
DMD-202ENST00000343523 CPLX2Q6PUV4 134 aaKnown RBP8.12□□□□□ -1.11
DMD-202ENST00000343523 HOMER1Q86YM7 354 aa8.12□□□□□ -1.11
DMD-202ENST00000343523 TRAK1Q9UPV9 953 aa8.12□□□□□ -1.11
DMD-202ENST00000343523 BICD2Q8TD16 824 aa8.12□□□□□ -1.11
DMD-202ENST00000343523 CCDC173Q0VFZ6 552 aa8.11□□□□□ -1.11
DMD-202ENST00000343523 BRD4O60885 1362 aaPredicted RBP8.11□□□□□ -1.11
DMD-202ENST00000343523 AMPHP49418 695 aa8.11□□□□□ -1.11
DMD-202ENST00000343523 NGDNQ8NEJ9 315 aaKnown RBP8.11□□□□□ -1.11
DMD-202ENST00000343523 HFM1A2PYH4 1435 aa8.11□□□□□ -1.11
DMD-202ENST00000343523 KIF3BO15066 747 aa8.11□□□□□ -1.11
DMD-202ENST00000343523 VPS53Q5VIR6 699 aa8.11□□□□□ -1.11
DMD-202ENST00000343523 SYNE3Q6ZMZ3 975 aa8.11□□□□□ -1.11
DMD-202ENST00000343523 ARGLU1Q9NWB6 273 aaPredicted RBP8.11□□□□□ -1.11
DMD-202ENST00000343523 NGEFQ8N5V2 710 aa8.11□□□□□ -1.11
DMD-202ENST00000343523 CCDC47Q96A33 483 aaKnown RBP8.11□□□□□ -1.11
DMD-202ENST00000343523 MAP3K1Q13233 1512 aa8.1□□□□□ -1.11
DMD-202ENST00000343523 SASS6Q6UVJ0 657 aa8.1□□□□□ -1.11
DMD-202ENST00000343523 PANK1Q8TE04 598 aa8.1□□□□□ -1.11
DMD-202ENST00000343523 RUFY2Q8WXA3 655 aa8.1□□□□□ -1.11
DMD-202ENST00000343523 AKNAQ7Z591 1439 aa8.1□□□□□ -1.11
DMD-202ENST00000343523 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms