RNA–Protein interactions for RNA: ENST00000343131.6

SYCE1-202, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYCE1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-202ENST00000343131 SPHKAPQ2M3C7 1700 aa24.35■■□□□ 1.49
SYCE1-202ENST00000343131 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
SYCE1-202ENST00000343131 SLC52A1Q9NWF4 448 aa24.34■■□□□ 1.49
SYCE1-202ENST00000343131 SLC26A8Q96RN1 970 aa24.33■■□□□ 1.49
SYCE1-202ENST00000343131 RIMS2Q9UQ26 1411 aa24.32■■□□□ 1.48
SYCE1-202ENST00000343131 NKTRP30414 1462 aaKnown RBP24.32■■□□□ 1.48
SYCE1-202ENST00000343131 CHD2O14647 1828 aaKnown RBP24.31■■□□□ 1.48
SYCE1-202ENST00000343131 NUP155O75694 1391 aa24.29■■□□□ 1.48
SYCE1-202ENST00000343131 TMEM94Q12767 1356 aa24.29■■□□□ 1.48
SYCE1-202ENST00000343131 ROBO1Q9Y6N7 1651 aa24.27■■□□□ 1.48
SYCE1-202ENST00000343131 PLEKHG1Q9ULL1 1385 aa24.27■■□□□ 1.48
SYCE1-202ENST00000343131 RRBP1Q9P2E9 1410 aaKnown RBP24.27■■□□□ 1.48
SYCE1-202ENST00000343131 RBM33Q96EV2 1170 aaKnown RBP24.24■■□□□ 1.47
SYCE1-202ENST00000343131 BCANQ96GW7 911 aa24.24■■□□□ 1.47
SYCE1-202ENST00000343131 PPP1R15AO75807 674 aaPredicted RBP24.23■■□□□ 1.47
SYCE1-202ENST00000343131 CHGAP10645 457 aaKnown RBP24.23■■□□□ 1.47
SYCE1-202ENST00000343131 KCNA6P17658 529 aa24.23■■□□□ 1.47
SYCE1-202ENST00000343131 DIP2AQ14689 1571 aa24.23■■□□□ 1.47
SYCE1-202ENST00000343131 SOCS7O14512 581 aa24.22■■□□□ 1.47
SYCE1-202ENST00000343131 CLTCL1P53675 1640 aa24.21■■□□□ 1.47
SYCE1-202ENST00000343131 NRXN3Q9Y4C0 1643 aa24.2■■□□□ 1.46
SYCE1-202ENST00000343131 NUTM2DQ5VT03 806 aaPredicted RBP24.19■■□□□ 1.46
SYCE1-202ENST00000343131 ADAMTS13Q76LX8 1427 aa24.18■■□□□ 1.46
SYCE1-202ENST00000343131 PROSER2Q86WR7 435 aaPredicted RBP24.18■■□□□ 1.46
SYCE1-202ENST00000343131 NAIPQ13075 1403 aa24.17■■□□□ 1.46
SYCE1-202ENST00000343131 TRPM2O94759 1503 aa24.15■■□□□ 1.46
SYCE1-202ENST00000343131 KIF1BO60333 1816 aa24.14■■□□□ 1.45
SYCE1-202ENST00000343131 FAM135BQ49AJ0 1406 aa24.13■■□□□ 1.45
SYCE1-202ENST00000343131 MSH6P52701 1360 aa24.13■■□□□ 1.45
SYCE1-202ENST00000343131 PHLPP1O60346 1717 aa24.13■■□□□ 1.45
SYCE1-202ENST00000343131 XRN1Q8IZH2 1706 aaKnown RBP24.12■■□□□ 1.45
SYCE1-202ENST00000343131 SETBP1Q9Y6X0 1596 aa24.12■■□□□ 1.45
SYCE1-202ENST00000343131 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.11■■□□□ 1.45
SYCE1-202ENST00000343131 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.11■■□□□ 1.45
SYCE1-202ENST00000343131 NEXMIFQ5QGS0 1516 aa24.1■■□□□ 1.45
SYCE1-202ENST00000343131 HDGFP51858 240 aaKnown RBP24.09■■□□□ 1.45
SYCE1-202ENST00000343131 PHF23Q9BUL5 403 aaPredicted RBP24.08■■□□□ 1.45
SYCE1-202ENST00000343131 TBX22Q9Y458 520 aa24.07■■□□□ 1.44
SYCE1-202ENST00000343131 HFM1A2PYH4 1435 aa24.07■■□□□ 1.44
SYCE1-202ENST00000343131 PTPRUQ92729 1446 aa24.06■■□□□ 1.44
SYCE1-202ENST00000343131 COL16A1Q07092 1604 aaPredicted RBP24.04■■□□□ 1.44
SYCE1-202ENST00000343131 PIK3R4Q99570 1358 aa24.03■■□□□ 1.44
SYCE1-202ENST00000343131 SETD1AO15047 1707 aaKnown RBP24.01■■□□□ 1.43
SYCE1-202ENST00000343131 ZNF326Q5BKZ1 582 aaKnown RBP24■■□□□ 1.43
SYCE1-202ENST00000343131 NALCNQ8IZF0 1738 aa24■■□□□ 1.43
SYCE1-202ENST00000343131 C14orf37Q86TY3 774 aa23.99■■□□□ 1.43
SYCE1-202ENST00000343131 NCOA3Q9Y6Q9 1424 aa23.99■■□□□ 1.43
SYCE1-202ENST00000343131 PPLO60437 1756 aa23.98■■□□□ 1.43
SYCE1-202ENST00000343131 SLAIN2Q9P270 581 aa23.97■■□□□ 1.43
SYCE1-202ENST00000343131 AHDC1Q5TGY3 1603 aaPredicted RBP23.95■■□□□ 1.43
SYCE1-202ENST00000343131 METP08581 1390 aa23.95■■□□□ 1.42
SYCE1-202ENST00000343131 TRIM52Q96A61 297 aa23.94■■□□□ 1.42
SYCE1-202ENST00000343131 AMOTL2Q9Y2J4 779 aa23.94■■□□□ 1.42
SYCE1-202ENST00000343131 SHPRHQ149N8 1683 aa23.92■■□□□ 1.42
SYCE1-202ENST00000343131 RGS17Q9UGC6 210 aaPredicted RBP23.91■■□□□ 1.42
SYCE1-202ENST00000343131 DCCP43146 1447 aa23.9■■□□□ 1.42
SYCE1-202ENST00000343131 NHSL1Q5SYE7 1610 aa23.89■■□□□ 1.42
SYCE1-202ENST00000343131 IFT172Q9UG01 1749 aa23.89■■□□□ 1.41
SYCE1-202ENST00000343131 ASXL1Q8IXJ9 1541 aa23.89■■□□□ 1.41
SYCE1-202ENST00000343131 ATF3P18847 181 aa23.88■■□□□ 1.41
SYCE1-202ENST00000343131 SLC4A1APQ9BWU0 796 aaKnown RBP23.88■■□□□ 1.41
SYCE1-202ENST00000343131 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
SYCE1-202ENST00000343131 CADPS2Q86UW7 1296 aa23.87■■□□□ 1.41
SYCE1-202ENST00000343131 LRP6O75581 1613 aa23.87■■□□□ 1.41
SYCE1-202ENST00000343131 JCADQ9P266 1359 aa23.87■■□□□ 1.41
SYCE1-202ENST00000343131 ADGRL3Q9HAR2 1447 aa23.86■■□□□ 1.41
SYCE1-202ENST00000343131 MST1RQ04912 1400 aa23.85■■□□□ 1.41
SYCE1-202ENST00000343131 FOXD1Q16676 465 aa23.84■■□□□ 1.41
SYCE1-202ENST00000343131 PTCH1Q13635 1447 aa23.81■■□□□ 1.4
SYCE1-202ENST00000343131 BRINP3Q76B58 766 aa23.8■■□□□ 1.4
SYCE1-202ENST00000343131 POTEAQ6S8J7 498 aa23.78■■□□□ 1.4
SYCE1-202ENST00000343131 CCDC144AA2RUR9 1427 aa23.77■■□□□ 1.4
SYCE1-202ENST00000343131 ROBO2Q9HCK4 1378 aa23.77■■□□□ 1.4
SYCE1-202ENST00000343131 PRAG1Q86YV5 1406 aa23.76■■□□□ 1.39
SYCE1-202ENST00000343131 SPATA31E1Q6ZUB1 1445 aa23.75■■□□□ 1.39
SYCE1-202ENST00000343131 VGFO15240 615 aaPredicted RBP23.74■■□□□ 1.39
SYCE1-202ENST00000343131 RPGRIP1LQ68CZ1 1315 aa23.73■■□□□ 1.39
SYCE1-202ENST00000343131 LAMC1P11047 1609 aa23.73■■□□□ 1.39
SYCE1-202ENST00000343131 SPATA31A6Q5VVP1 1343 aa23.72■■□□□ 1.39
SYCE1-202ENST00000343131 KNDC1Q76NI1 1749 aa23.72■■□□□ 1.39
SYCE1-202ENST00000343131 CDC42BPGQ6DT37 1551 aa23.69■■□□□ 1.38
SYCE1-202ENST00000343131 C1orf167Q5SNV9 1468 aa23.69■■□□□ 1.38
SYCE1-202ENST00000343131 SETD5Q9C0A6 1442 aa23.69■■□□□ 1.38
SYCE1-202ENST00000343131 MPHOSPH9Q99550 1183 aa23.69■■□□□ 1.38
SYCE1-202ENST00000343131 DDX17Q92841 729 aaKnown RBP23.68■■□□□ 1.38
SYCE1-202ENST00000343131 ADGRF5Q8IZF2 1346 aa23.67■■□□□ 1.38
SYCE1-202ENST00000343131 MEX3CQ5U5Q3 659 aaKnown RBP23.67■■□□□ 1.38
SYCE1-202ENST00000343131 RGL3Q3MIN7 710 aa23.65■■□□□ 1.38
SYCE1-202ENST00000343131 PIK3C2GO75747 1445 aa23.65■■□□□ 1.38
SYCE1-202ENST00000343131 NUTM2BA6NNL0 878 aaPredicted RBP23.63■■□□□ 1.37
SYCE1-202ENST00000343131 NUTM2EB1AL46 878 aaPredicted RBP23.63■■□□□ 1.37
SYCE1-202ENST00000343131 NUTM2AQ8IVF1 878 aaPredicted RBP23.63■■□□□ 1.37
SYCE1-202ENST00000343131 PNPLA6Q8IY17 1366 aa23.62■■□□□ 1.37
SYCE1-202ENST00000343131 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
SYCE1-202ENST00000343131 RAB3GAP2Q9H2M9 1393 aa23.61■■□□□ 1.37
SYCE1-202ENST00000343131 TECPR2O15040 1411 aa23.6■■□□□ 1.37
SYCE1-202ENST00000343131 FMN2Q9NZ56 1722 aa23.6■■□□□ 1.37
SYCE1-202ENST00000343131 ORAI2Q96SN7 254 aa23.57■■□□□ 1.36
SYCE1-202ENST00000343131 MYOM2P54296 1465 aa23.56■■□□□ 1.36
SYCE1-202ENST00000343131 LRPPRCP42704 1394 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms