RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 SLC26A8Q96RN1 970 aa30.88■■■□□ 2.53
SDHC-201ENST00000342751 RRBP1Q9P2E9 1410 aaKnown RBP30.86■■■□□ 2.53
SDHC-201ENST00000342751 PPP1R15AO75807 674 aaPredicted RBP30.85■■■□□ 2.53
SDHC-201ENST00000342751 RIMS2Q9UQ26 1411 aa30.82■■■□□ 2.52
SDHC-201ENST00000342751 TMEM131LA2VDJ0 1609 aa30.82■■■□□ 2.52
SDHC-201ENST00000342751 XIRP1Q702N8 1843 aaKnown RBP30.8■■■□□ 2.52
SDHC-201ENST00000342751 NUTM2DQ5VT03 806 aaPredicted RBP30.79■■■□□ 2.52
SDHC-201ENST00000342751 ZFYVE9O95405 1425 aa30.79■■■□□ 2.52
SDHC-201ENST00000342751 SOCS7O14512 581 aa30.75■■■□□ 2.51
SDHC-201ENST00000342751 RBM33Q96EV2 1170 aaKnown RBP30.75■■■□□ 2.51
SDHC-201ENST00000342751 MED1Q15648 1581 aaPredicted RBP30.75■■■□□ 2.51
SDHC-201ENST00000342751 KCNA6P17658 529 aa30.74■■■□□ 2.51
SDHC-201ENST00000342751 PLEKHG1Q9ULL1 1385 aa30.73■■■□□ 2.51
SDHC-201ENST00000342751 TMEM94Q12767 1356 aa30.72■■■□□ 2.51
SDHC-201ENST00000342751 HDGFP51858 240 aaKnown RBP30.72■■■□□ 2.51
SDHC-201ENST00000342751 PROSER2Q86WR7 435 aaPredicted RBP30.71■■■□□ 2.51
SDHC-201ENST00000342751 NAIPQ13075 1403 aa30.71■■■□□ 2.51
SDHC-201ENST00000342751 SPHKAPQ2M3C7 1700 aa30.7■■■□□ 2.5
SDHC-201ENST00000342751 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.68■■■□□ 2.5
SDHC-201ENST00000342751 NWD1Q149M9 1564 aa30.67■■■□□ 2.5
SDHC-201ENST00000342751 TRIM52Q96A61 297 aa30.65■■■□□ 2.5
SDHC-201ENST00000342751 NKTRP30414 1462 aaKnown RBP30.64■■■□□ 2.5
SDHC-201ENST00000342751 ZNF326Q5BKZ1 582 aaKnown RBP30.62■■■□□ 2.49
SDHC-201ENST00000342751 HFM1A2PYH4 1435 aa30.59■■■□□ 2.49
SDHC-201ENST00000342751 CHD2O14647 1828 aaKnown RBP30.58■■■□□ 2.49
SDHC-201ENST00000342751 ADAMTS13Q76LX8 1427 aa30.57■■■□□ 2.48
SDHC-201ENST00000342751 CLTCL1P53675 1640 aa30.57■■■□□ 2.48
SDHC-201ENST00000342751 TBX22Q9Y458 520 aa30.56■■■□□ 2.48
SDHC-201ENST00000342751 MSH6P52701 1360 aa30.54■■■□□ 2.48
SDHC-201ENST00000342751 DIP2AQ14689 1571 aa30.54■■■□□ 2.48
SDHC-201ENST00000342751 TRPM2O94759 1503 aa30.53■■■□□ 2.48
SDHC-201ENST00000342751 C14orf37Q86TY3 774 aa30.53■■■□□ 2.48
SDHC-201ENST00000342751 PHF23Q9BUL5 403 aaPredicted RBP30.53■■■□□ 2.48
SDHC-201ENST00000342751 FAM135BQ49AJ0 1406 aa30.53■■■□□ 2.48
SDHC-201ENST00000342751 ROBO1Q9Y6N7 1651 aa30.5■■■□□ 2.47
SDHC-201ENST00000342751 SLC4A1APQ9BWU0 796 aaKnown RBP30.5■■■□□ 2.47
SDHC-201ENST00000342751 KIF1BO60333 1816 aa30.46■■■□□ 2.47
SDHC-201ENST00000342751 NRXN3Q9Y4C0 1643 aa30.44■■■□□ 2.46
SDHC-201ENST00000342751 PIK3R4Q99570 1358 aa30.43■■■□□ 2.46
SDHC-201ENST00000342751 PTPRUQ92729 1446 aa30.43■■■□□ 2.46
SDHC-201ENST00000342751 AMOTL2Q9Y2J4 779 aa30.43■■■□□ 2.46
SDHC-201ENST00000342751 NEXMIFQ5QGS0 1516 aa30.42■■■□□ 2.46
SDHC-201ENST00000342751 SETBP1Q9Y6X0 1596 aa30.41■■■□□ 2.46
SDHC-201ENST00000342751 FOXD1Q16676 465 aa30.41■■■□□ 2.46
SDHC-201ENST00000342751 SLAIN2Q9P270 581 aa30.39■■■□□ 2.46
SDHC-201ENST00000342751 NCOA3Q9Y6Q9 1424 aa30.36■■■□□ 2.45
SDHC-201ENST00000342751 METP08581 1390 aa30.35■■■□□ 2.45
SDHC-201ENST00000342751 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.34■■■□□ 2.45
SDHC-201ENST00000342751 XRN1Q8IZH2 1706 aaKnown RBP30.33■■■□□ 2.45
SDHC-201ENST00000342751 ATF3P18847 181 aa30.33■■■□□ 2.45
SDHC-201ENST00000342751 PHLPP1O60346 1717 aa30.33■■■□□ 2.45
SDHC-201ENST00000342751 C19orf44Q9H6X5 657 aa30.3■■■□□ 2.44
SDHC-201ENST00000342751 CADPS2Q86UW7 1296 aa30.29■■■□□ 2.44
SDHC-201ENST00000342751 MPHOSPH9Q99550 1183 aa30.26■■■□□ 2.43
SDHC-201ENST00000342751 VGFO15240 615 aaPredicted RBP30.25■■■□□ 2.43
SDHC-201ENST00000342751 RGS17Q9UGC6 210 aaPredicted RBP30.25■■■□□ 2.43
SDHC-201ENST00000342751 CCDC144AA2RUR9 1427 aa30.24■■■□□ 2.43
SDHC-201ENST00000342751 PPLO60437 1756 aa30.23■■■□□ 2.43
SDHC-201ENST00000342751 RGL3Q3MIN7 710 aa30.21■■■□□ 2.43
SDHC-201ENST00000342751 COL16A1Q07092 1604 aaPredicted RBP30.21■■■□□ 2.43
SDHC-201ENST00000342751 RPGRIP1LQ68CZ1 1315 aa30.21■■■□□ 2.43
SDHC-201ENST00000342751 SETD5Q9C0A6 1442 aa30.2■■■□□ 2.42
SDHC-201ENST00000342751 JCADQ9P266 1359 aa30.19■■■□□ 2.42
SDHC-201ENST00000342751 SETD1AO15047 1707 aaKnown RBP30.18■■■□□ 2.42
SDHC-201ENST00000342751 DCCP43146 1447 aa30.16■■■□□ 2.42
SDHC-201ENST00000342751 NALCNQ8IZF0 1738 aa30.16■■■□□ 2.42
SDHC-201ENST00000342751 AHDC1Q5TGY3 1603 aaPredicted RBP30.15■■■□□ 2.42
SDHC-201ENST00000342751 ADGRL3Q9HAR2 1447 aa30.15■■■□□ 2.42
SDHC-201ENST00000342751 BRINP3Q76B58 766 aa30.15■■■□□ 2.42
SDHC-201ENST00000342751 MST1RQ04912 1400 aa30.13■■■□□ 2.41
SDHC-201ENST00000342751 ADGRF5Q8IZF2 1346 aa30.11■■■□□ 2.41
SDHC-201ENST00000342751 RAB3GAP2Q9H2M9 1393 aa30.11■■■□□ 2.41
SDHC-201ENST00000342751 ROBO2Q9HCK4 1378 aa30.11■■■□□ 2.41
SDHC-201ENST00000342751 ASXL1Q8IXJ9 1541 aa30.11■■■□□ 2.41
SDHC-201ENST00000342751 PTCH1Q13635 1447 aa30.09■■■□□ 2.41
SDHC-201ENST00000342751 POTEAQ6S8J7 498 aa30.09■■■□□ 2.41
SDHC-201ENST00000342751 SPATA31E1Q6ZUB1 1445 aa30.09■■■□□ 2.41
SDHC-201ENST00000342751 SHPRHQ149N8 1683 aa30.06■■■□□ 2.4
SDHC-201ENST00000342751 IFT172Q9UG01 1749 aa30.05■■■□□ 2.4
SDHC-201ENST00000342751 MEX3CQ5U5Q3 659 aaKnown RBP30.04■■■□□ 2.4
SDHC-201ENST00000342751 SPATA31A6Q5VVP1 1343 aa30.03■■■□□ 2.4
SDHC-201ENST00000342751 DDX17Q92841 729 aaKnown RBP30.03■■■□□ 2.4
SDHC-201ENST00000342751 STK26Q9P289 416 aa30.03■■■□□ 2.4
SDHC-201ENST00000342751 LRP6O75581 1613 aa30.03■■■□□ 2.4
SDHC-201ENST00000342751 ANKRD30BQ9BXX2 1392 aa30.03■■■□□ 2.4
SDHC-201ENST00000342751 ACIN1Q9UKV3 1341 aaKnown RBP30.01■■■□□ 2.4
SDHC-201ENST00000342751 NHSL1Q5SYE7 1610 aa30■■■□□ 2.39
SDHC-201ENST00000342751 NUTM2BA6NNL0 878 aaPredicted RBP29.99■■■□□ 2.39
SDHC-201ENST00000342751 NUTM2EB1AL46 878 aaPredicted RBP29.99■■■□□ 2.39
SDHC-201ENST00000342751 NUTM2AQ8IVF1 878 aaPredicted RBP29.99■■■□□ 2.39
SDHC-201ENST00000342751 C1orf167Q5SNV9 1468 aa29.98■■■□□ 2.39
SDHC-201ENST00000342751 TMEM132EQ6IEE7 984 aa29.97■■■□□ 2.39
SDHC-201ENST00000342751 PRAG1Q86YV5 1406 aa29.96■■■□□ 2.39
SDHC-201ENST00000342751 PIK3C2GO75747 1445 aa29.95■■■□□ 2.38
SDHC-201ENST00000342751 ORAI2Q96SN7 254 aa29.92■■■□□ 2.38
SDHC-201ENST00000342751 WAPLQ7Z5K2 1190 aa29.91■■■□□ 2.38
SDHC-201ENST00000342751 LRPPRCP42704 1394 aaKnown RBP29.9■■■□□ 2.38
SDHC-201ENST00000342751 LRRC59Q96AG4 307 aaKnown RBP29.88■■■□□ 2.37
SDHC-201ENST00000342751 PLEKHH1Q9ULM0 1364 aa29.88■■■□□ 2.37
SDHC-201ENST00000342751 NUTM2FA1L443 756 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms