RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 SETD1AO15047 1707 aaKnown RBP26.6■■□□□ 1.85
TRA2B-202ENST00000342294 ZFYVE9O95405 1425 aa26.6■■□□□ 1.85
TRA2B-202ENST00000342294 LOC105371045A0A1W2PR82 267 aa26.59■■□□□ 1.85
TRA2B-202ENST00000342294 BCANQ96GW7 911 aa26.59■■□□□ 1.85
TRA2B-202ENST00000342294 CHIC2Q9UKJ5 165 aa26.59■■□□□ 1.85
TRA2B-202ENST00000342294 PLEKHG1Q9ULL1 1385 aa26.58■■□□□ 1.85
TRA2B-202ENST00000342294 COL16A1Q07092 1604 aaPredicted RBP26.57■■□□□ 1.84
TRA2B-202ENST00000342294 FGD6Q6ZV73 1430 aa26.56■■□□□ 1.84
TRA2B-202ENST00000342294 NCOA3Q9Y6Q9 1424 aa26.56■■□□□ 1.84
TRA2B-202ENST00000342294 SPATA31A6Q5VVP1 1343 aa26.55■■□□□ 1.84
TRA2B-202ENST00000342294 LRP6O75581 1613 aa26.54■■□□□ 1.84
TRA2B-202ENST00000342294 TBX22Q9Y458 520 aa26.54■■□□□ 1.84
TRA2B-202ENST00000342294 CHD2O14647 1828 aaKnown RBP26.53■■□□□ 1.84
TRA2B-202ENST00000342294 UPF1Q92900 1129 aaKnown RBP eCLIP26.53■■□□□ 1.84
TRA2B-202ENST00000342294 RPRD2Q5VT52 1461 aaKnown RBP26.53■■□□□ 1.84
TRA2B-202ENST00000342294 RIMS2Q9UQ26 1411 aa26.52■■□□□ 1.84
TRA2B-202ENST00000342294 HDGFP51858 240 aaKnown RBP26.51■■□□□ 1.83
TRA2B-202ENST00000342294 ZNF772Q68DY9 489 aaPredicted RBP26.5■■□□□ 1.83
TRA2B-202ENST00000342294 ADGRL2O95490 1459 aa26.49■■□□□ 1.83
TRA2B-202ENST00000342294 PPP1R15AO75807 674 aaPredicted RBP26.48■■□□□ 1.83
TRA2B-202ENST00000342294 TMEM131LA2VDJ0 1609 aa26.46■■□□□ 1.83
TRA2B-202ENST00000342294 AHDC1Q5TGY3 1603 aaPredicted RBP26.46■■□□□ 1.83
TRA2B-202ENST00000342294 MEX3CQ5U5Q3 659 aaKnown RBP26.45■■□□□ 1.82
TRA2B-202ENST00000342294 CADPS2Q86UW7 1296 aa26.45■■□□□ 1.82
TRA2B-202ENST00000342294 C19orf44Q9H6X5 657 aa26.45■■□□□ 1.82
TRA2B-202ENST00000342294 ADAMTS13Q76LX8 1427 aa26.45■■□□□ 1.82
TRA2B-202ENST00000342294 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.44■■□□□ 1.82
TRA2B-202ENST00000342294 TRIM52Q96A61 297 aa26.43■■□□□ 1.82
TRA2B-202ENST00000342294 ANKRD50Q9ULJ7 1429 aa26.42■■□□□ 1.82
TRA2B-202ENST00000342294 APLP2Q06481 763 aa26.42■■□□□ 1.82
TRA2B-202ENST00000342294 C14orf37Q86TY3 774 aa26.42■■□□□ 1.82
TRA2B-202ENST00000342294 PIK3R4Q99570 1358 aa26.42■■□□□ 1.82
TRA2B-202ENST00000342294 MYO5BQ9ULV0 1848 aa26.42■■□□□ 1.82
TRA2B-202ENST00000342294 GCC2Q8IWJ2 1684 aa26.41■■□□□ 1.82
TRA2B-202ENST00000342294 ATF3P18847 181 aa26.4■■□□□ 1.82
TRA2B-202ENST00000342294 SHPRHQ149N8 1683 aa26.4■■□□□ 1.82
TRA2B-202ENST00000342294 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.39■■□□□ 1.82
TRA2B-202ENST00000342294 RXRBP28702 533 aa26.38■■□□□ 1.81
TRA2B-202ENST00000342294 BRINP3Q76B58 766 aa26.37■■□□□ 1.81
TRA2B-202ENST00000342294 DIP2AQ14689 1571 aa26.37■■□□□ 1.81
TRA2B-202ENST00000342294 CDK12Q9NYV4 1490 aaPredicted RBP26.36■■□□□ 1.81
TRA2B-202ENST00000342294 NUTM2DQ5VT03 806 aaPredicted RBP26.35■■□□□ 1.81
TRA2B-202ENST00000342294 CHGAP10645 457 aaKnown RBP26.34■■□□□ 1.81
TRA2B-202ENST00000342294 PTPRUQ92729 1446 aa26.33■■□□□ 1.81
TRA2B-202ENST00000342294 AMOTL2Q9Y2J4 779 aa26.33■■□□□ 1.81
TRA2B-202ENST00000342294 NUTM2BA6NNL0 878 aaPredicted RBP26.3■■□□□ 1.8
TRA2B-202ENST00000342294 NUTM2EB1AL46 878 aaPredicted RBP26.3■■□□□ 1.8
TRA2B-202ENST00000342294 NUTM2AQ8IVF1 878 aaPredicted RBP26.3■■□□□ 1.8
TRA2B-202ENST00000342294 DCCP43146 1447 aa26.3■■□□□ 1.8
TRA2B-202ENST00000342294 FAM50AQ14320 339 aaKnown RBP26.29■■□□□ 1.8
TRA2B-202ENST00000342294 AFF2P51816 1311 aa26.29■■□□□ 1.8
TRA2B-202ENST00000342294 SETD5Q9C0A6 1442 aa26.29■■□□□ 1.8
TRA2B-202ENST00000342294 TRPM2O94759 1503 aa26.28■■□□□ 1.8
TRA2B-202ENST00000342294 UNC13BO14795 1591 aa26.27■■□□□ 1.8
TRA2B-202ENST00000342294 ASXL1Q8IXJ9 1541 aa26.25■■□□□ 1.79
TRA2B-202ENST00000342294 E9PCH4 1651 aa26.25■■□□□ 1.79
TRA2B-202ENST00000342294 MST1RQ04912 1400 aa26.23■■□□□ 1.79
TRA2B-202ENST00000342294 LRRC59Q96AG4 307 aaKnown RBP26.21■■□□□ 1.79
TRA2B-202ENST00000342294 XRN1Q8IZH2 1706 aaKnown RBP26.19■■□□□ 1.78
TRA2B-202ENST00000342294 NHSL1Q5SYE7 1610 aa26.18■■□□□ 1.78
TRA2B-202ENST00000342294 RGS12O14924 1447 aa26.18■■□□□ 1.78
TRA2B-202ENST00000342294 RBM6P78332 1123 aaKnown RBP26.18■■□□□ 1.78
TRA2B-202ENST00000342294 QTRT2Q9H974 415 aaKnown RBP26.18■■□□□ 1.78
TRA2B-202ENST00000342294 PNPLA6Q8IY17 1366 aa26.17■■□□□ 1.78
TRA2B-202ENST00000342294 IQGAP3Q86VI3 1631 aa26.17■■□□□ 1.78
TRA2B-202ENST00000342294 NRXN3Q9Y4C0 1643 aa26.17■■□□□ 1.78
TRA2B-202ENST00000342294 SETBP1Q9Y6X0 1596 aa26.16■■□□□ 1.78
TRA2B-202ENST00000342294 C8orf37Q96NL8 207 aa26.15■■□□□ 1.78
TRA2B-202ENST00000342294 ROCK1Q13464 1354 aa26.15■■□□□ 1.78
TRA2B-202ENST00000342294 DDX17Q92841 729 aaKnown RBP26.14■■□□□ 1.78
TRA2B-202ENST00000342294 METP08581 1390 aa26.14■■□□□ 1.78
TRA2B-202ENST00000342294 NUP155O75694 1391 aa26.12■■□□□ 1.77
TRA2B-202ENST00000342294 ADGRL3Q9HAR2 1447 aa26.12■■□□□ 1.77
TRA2B-202ENST00000342294 NGLY1Q96IV0 654 aa26.06■■□□□ 1.76
TRA2B-202ENST00000342294 ADAMTS2O95450 1211 aa26.04■■□□□ 1.76
TRA2B-202ENST00000342294 C1orf167Q5SNV9 1468 aa26.04■■□□□ 1.76
TRA2B-202ENST00000342294 ZNF326Q5BKZ1 582 aaKnown RBP26.02■■□□□ 1.76
TRA2B-202ENST00000342294 SOS2Q07890 1332 aaPredicted RBP26.01■■□□□ 1.75
TRA2B-202ENST00000342294 ATAD2Q6PL18 1390 aa26.01■■□□□ 1.75
TRA2B-202ENST00000342294 NALCNQ8IZF0 1738 aa26■■□□□ 1.75
TRA2B-202ENST00000342294 LAMC1P11047 1609 aa26■■□□□ 1.75
TRA2B-202ENST00000342294 SRCAPQ6ZRS2 3230 aa25.99■■□□□ 1.75
TRA2B-202ENST00000342294 FNBP4Q8N3X1 1017 aaPredicted RBP25.98■■□□□ 1.75
TRA2B-202ENST00000342294 USP21Q9UK80 565 aa25.98■■□□□ 1.75
TRA2B-202ENST00000342294 TRPC5Q9UL62 973 aaPredicted RBP25.97■■□□□ 1.75
TRA2B-202ENST00000342294 ORAI2Q96SN7 254 aa25.96■■□□□ 1.75
TRA2B-202ENST00000342294 NEXMIFQ5QGS0 1516 aa25.96■■□□□ 1.75
TRA2B-202ENST00000342294 SPHKAPQ2M3C7 1700 aa25.96■■□□□ 1.75
TRA2B-202ENST00000342294 PTCH1Q13635 1447 aa25.95■■□□□ 1.74
TRA2B-202ENST00000342294 ATRNO75882 1429 aa25.93■■□□□ 1.74
TRA2B-202ENST00000342294 ROBO2Q9HCK4 1378 aa25.92■■□□□ 1.74
TRA2B-202ENST00000342294 ZRANB1Q9UGI0 708 aa25.9■■□□□ 1.74
TRA2B-202ENST00000342294 PRAG1Q86YV5 1406 aa25.89■■□□□ 1.74
TRA2B-202ENST00000342294 CLTCL1P53675 1640 aa25.88■■□□□ 1.73
TRA2B-202ENST00000342294 ITGAEP38570 1179 aa25.88■■□□□ 1.73
TRA2B-202ENST00000342294 FOXD1Q16676 465 aa25.87■■□□□ 1.73
TRA2B-202ENST00000342294 COL22A1Q8NFW1 1626 aaPredicted RBP25.86■■□□□ 1.73
TRA2B-202ENST00000342294 MYOM2P54296 1465 aa25.85■■□□□ 1.73
TRA2B-202ENST00000342294 CCDC125Q86Z20 511 aa25.85■■□□□ 1.73
TRA2B-202ENST00000342294 BCL9LQ86UU0 1499 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms