RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 ROCK1Q13464 1354 aa19.99■□□□□ 0.79
NECTIN1-203ENST00000341398 TMEM94Q12767 1356 aa19.97■□□□□ 0.79
NECTIN1-203ENST00000341398 CHGAP10645 457 aaKnown RBP19.97■□□□□ 0.79
NECTIN1-203ENST00000341398 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.97■□□□□ 0.79
NECTIN1-203ENST00000341398 MYO5BQ9ULV0 1848 aa19.96■□□□□ 0.79
NECTIN1-203ENST00000341398 ITGAEP38570 1179 aa19.95■□□□□ 0.79
NECTIN1-203ENST00000341398 UNC13BO14795 1591 aa19.95■□□□□ 0.78
NECTIN1-203ENST00000341398 FAM135BQ49AJ0 1406 aa19.95■□□□□ 0.78
NECTIN1-203ENST00000341398 PLEKHG1Q9ULL1 1385 aa19.94■□□□□ 0.78
NECTIN1-203ENST00000341398 RIMS2Q9UQ26 1411 aa19.94■□□□□ 0.78
NECTIN1-203ENST00000341398 NKTRP30414 1462 aaKnown RBP19.93■□□□□ 0.78
NECTIN1-203ENST00000341398 TMEM131LA2VDJ0 1609 aa19.92■□□□□ 0.78
NECTIN1-203ENST00000341398 NUP155O75694 1391 aa19.91■□□□□ 0.78
NECTIN1-203ENST00000341398 MSH6P52701 1360 aa19.91■□□□□ 0.78
NECTIN1-203ENST00000341398 ZFYVE9O95405 1425 aa19.91■□□□□ 0.78
NECTIN1-203ENST00000341398 TBX22Q9Y458 520 aa19.91■□□□□ 0.78
NECTIN1-203ENST00000341398 E9PCH4 1651 aa19.9■□□□□ 0.78
NECTIN1-203ENST00000341398 CHD2O14647 1828 aaKnown RBP19.9■□□□□ 0.78
NECTIN1-203ENST00000341398 RBM33Q96EV2 1170 aaKnown RBP19.9■□□□□ 0.78
NECTIN1-203ENST00000341398 IQGAP3Q86VI3 1631 aa19.9■□□□□ 0.78
NECTIN1-203ENST00000341398 NWD1Q149M9 1564 aa19.88■□□□□ 0.77
NECTIN1-203ENST00000341398 PPARGC1BQ86YN6 1023 aaKnown RBP19.88■□□□□ 0.77
NECTIN1-203ENST00000341398 SLAIN2Q9P270 581 aa19.86■□□□□ 0.77
NECTIN1-203ENST00000341398 C14orf37Q86TY3 774 aa19.85■□□□□ 0.77
NECTIN1-203ENST00000341398 ROBO1Q9Y6N7 1651 aa19.85■□□□□ 0.77
NECTIN1-203ENST00000341398 NUTM2DQ5VT03 806 aaPredicted RBP19.84■□□□□ 0.77
NECTIN1-203ENST00000341398 NCOA3Q9Y6Q9 1424 aa19.84■□□□□ 0.77
NECTIN1-203ENST00000341398 PIK3R4Q99570 1358 aa19.82■□□□□ 0.76
NECTIN1-203ENST00000341398 DIP2AQ14689 1571 aa19.81■□□□□ 0.76
NECTIN1-203ENST00000341398 ZNF326Q5BKZ1 582 aaKnown RBP19.79■□□□□ 0.76
NECTIN1-203ENST00000341398 C19orf44Q9H6X5 657 aa19.79■□□□□ 0.76
NECTIN1-203ENST00000341398 ADAMTS13Q76LX8 1427 aa19.78■□□□□ 0.76
NECTIN1-203ENST00000341398 ATF3P18847 181 aa19.78■□□□□ 0.76
NECTIN1-203ENST00000341398 CADPS2Q86UW7 1296 aa19.78■□□□□ 0.76
NECTIN1-203ENST00000341398 SPHKAPQ2M3C7 1700 aa19.77■□□□□ 0.75
NECTIN1-203ENST00000341398 TRPM2O94759 1503 aa19.76■□□□□ 0.75
NECTIN1-203ENST00000341398 AMOTL2Q9Y2J4 779 aa19.76■□□□□ 0.75
NECTIN1-203ENST00000341398 PHLPP1O60346 1717 aa19.76■□□□□ 0.75
NECTIN1-203ENST00000341398 RGS17Q9UGC6 210 aaPredicted RBP19.74■□□□□ 0.75
NECTIN1-203ENST00000341398 JCADQ9P266 1359 aa19.73■□□□□ 0.75
NECTIN1-203ENST00000341398 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.72■□□□□ 0.75
NECTIN1-203ENST00000341398 RRBP1Q9P2E9 1410 aaKnown RBP19.71■□□□□ 0.75
NECTIN1-203ENST00000341398 TRIM52Q96A61 297 aa19.7■□□□□ 0.74
NECTIN1-203ENST00000341398 KIF1BO60333 1816 aa19.69■□□□□ 0.74
NECTIN1-203ENST00000341398 NAIPQ13075 1403 aa19.67■□□□□ 0.74
NECTIN1-203ENST00000341398 SETBP1Q9Y6X0 1596 aa19.67■□□□□ 0.74
NECTIN1-203ENST00000341398 PTPRUQ92729 1446 aa19.66■□□□□ 0.74
NECTIN1-203ENST00000341398 POTEAQ6S8J7 498 aa19.66■□□□□ 0.74
NECTIN1-203ENST00000341398 SPATA31A6Q5VVP1 1343 aa19.66■□□□□ 0.74
NECTIN1-203ENST00000341398 VGFO15240 615 aaPredicted RBP19.64■□□□□ 0.73
NECTIN1-203ENST00000341398 MEX3CQ5U5Q3 659 aaKnown RBP19.64■□□□□ 0.73
NECTIN1-203ENST00000341398 DCCP43146 1447 aa19.64■□□□□ 0.73
NECTIN1-203ENST00000341398 COL16A1Q07092 1604 aaPredicted RBP19.64■□□□□ 0.73
NECTIN1-203ENST00000341398 CLTCL1P53675 1640 aa19.63■□□□□ 0.73
NECTIN1-203ENST00000341398 NRXN3Q9Y4C0 1643 aa19.63■□□□□ 0.73
NECTIN1-203ENST00000341398 SLC4A1APQ9BWU0 796 aaKnown RBP19.62■□□□□ 0.73
NECTIN1-203ENST00000341398 AHDC1Q5TGY3 1603 aaPredicted RBP19.61■□□□□ 0.73
NECTIN1-203ENST00000341398 METP08581 1390 aa19.61■□□□□ 0.73
NECTIN1-203ENST00000341398 BRINP3Q76B58 766 aa19.61■□□□□ 0.73
NECTIN1-203ENST00000341398 XRN1Q8IZH2 1706 aaKnown RBP19.61■□□□□ 0.73
NECTIN1-203ENST00000341398 NEXMIFQ5QGS0 1516 aa19.6■□□□□ 0.73
NECTIN1-203ENST00000341398 HFM1A2PYH4 1435 aa19.6■□□□□ 0.73
NECTIN1-203ENST00000341398 RPGRIP1LQ68CZ1 1315 aa19.59■□□□□ 0.73
NECTIN1-203ENST00000341398 ZNF772Q68DY9 489 aaPredicted RBP19.58■□□□□ 0.73
NECTIN1-203ENST00000341398 SETD1AO15047 1707 aaKnown RBP19.57■□□□□ 0.72
NECTIN1-203ENST00000341398 SHPRHQ149N8 1683 aa19.57■□□□□ 0.72
NECTIN1-203ENST00000341398 LRRC59Q96AG4 307 aaKnown RBP19.57■□□□□ 0.72
NECTIN1-203ENST00000341398 ADGRL3Q9HAR2 1447 aa19.55■□□□□ 0.72
NECTIN1-203ENST00000341398 MST1RQ04912 1400 aa19.54■□□□□ 0.72
NECTIN1-203ENST00000341398 ASXL1Q8IXJ9 1541 aa19.53■□□□□ 0.72
NECTIN1-203ENST00000341398 NUTM2BA6NNL0 878 aaPredicted RBP19.53■□□□□ 0.72
NECTIN1-203ENST00000341398 NUTM2EB1AL46 878 aaPredicted RBP19.53■□□□□ 0.72
NECTIN1-203ENST00000341398 NUTM2AQ8IVF1 878 aaPredicted RBP19.53■□□□□ 0.72
NECTIN1-203ENST00000341398 LRP6O75581 1613 aa19.51■□□□□ 0.71
NECTIN1-203ENST00000341398 SETD5Q9C0A6 1442 aa19.51■□□□□ 0.71
NECTIN1-203ENST00000341398 NHSL1Q5SYE7 1610 aa19.49■□□□□ 0.71
NECTIN1-203ENST00000341398 ACIN1Q9UKV3 1341 aaKnown RBP19.49■□□□□ 0.71
NECTIN1-203ENST00000341398 NALCNQ8IZF0 1738 aa19.49■□□□□ 0.71
NECTIN1-203ENST00000341398 PPLO60437 1756 aa19.48■□□□□ 0.71
NECTIN1-203ENST00000341398 PTCH1Q13635 1447 aa19.48■□□□□ 0.71
NECTIN1-203ENST00000341398 RXRBP28702 533 aa19.47■□□□□ 0.71
NECTIN1-203ENST00000341398 CCDC144AA2RUR9 1427 aa19.46■□□□□ 0.71
NECTIN1-203ENST00000341398 FOXD1Q16676 465 aa19.45■□□□□ 0.7
NECTIN1-203ENST00000341398 C1orf167Q5SNV9 1468 aa19.45■□□□□ 0.7
NECTIN1-203ENST00000341398 RGL3Q3MIN7 710 aa19.44■□□□□ 0.7
NECTIN1-203ENST00000341398 MPHOSPH9Q99550 1183 aa19.44■□□□□ 0.7
NECTIN1-203ENST00000341398 ROBO2Q9HCK4 1378 aa19.44■□□□□ 0.7
NECTIN1-203ENST00000341398 DDX17Q92841 729 aaKnown RBP19.44■□□□□ 0.7
NECTIN1-203ENST00000341398 AFF2P51816 1311 aa19.43■□□□□ 0.7
NECTIN1-203ENST00000341398 PRAG1Q86YV5 1406 aa19.41■□□□□ 0.7
NECTIN1-203ENST00000341398 C8orf37Q96NL8 207 aa19.41■□□□□ 0.7
NECTIN1-203ENST00000341398 ORAI2Q96SN7 254 aa19.41■□□□□ 0.7
NECTIN1-203ENST00000341398 PNPLA6Q8IY17 1366 aa19.41■□□□□ 0.7
NECTIN1-203ENST00000341398 ANKRD30BQ9BXX2 1392 aa19.41■□□□□ 0.7
NECTIN1-203ENST00000341398 SOS2Q07890 1332 aaPredicted RBP19.38■□□□□ 0.69
NECTIN1-203ENST00000341398 ADGRF5Q8IZF2 1346 aa19.38■□□□□ 0.69
NECTIN1-203ENST00000341398 NGLY1Q96IV0 654 aa19.38■□□□□ 0.69
NECTIN1-203ENST00000341398 QTRT2Q9H974 415 aaKnown RBP19.38■□□□□ 0.69
NECTIN1-203ENST00000341398 ESCO1Q5FWF5 840 aa19.37■□□□□ 0.69
NECTIN1-203ENST00000341398 STK26Q9P289 416 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms