RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 CCDC7Q96M83 1385 aa15.63■□□□□ 0.09
RTN3-203ENST00000341307 ATP7AQ04656 1500 aa15.63■□□□□ 0.09
RTN3-203ENST00000341307 MAGI2Q86UL8 1455 aa15.63■□□□□ 0.09
RTN3-203ENST00000341307 ZBED9Q6R2W3 1325 aa15.63■□□□□ 0.09
RTN3-203ENST00000341307 USP47Q96K76 1375 aa15.62■□□□□ 0.09
RTN3-203ENST00000341307 RTEL1-TNFRSF6BF6WH68 1400 aa15.62■□□□□ 0.09
RTN3-203ENST00000341307 KIF7Q2M1P5 1343 aa15.62■□□□□ 0.09
RTN3-203ENST00000341307 DIP2CQ9Y2E4 1556 aa15.62■□□□□ 0.09
RTN3-203ENST00000341307 CCDC184Q52MB2 194 aa15.61■□□□□ 0.09
RTN3-203ENST00000341307 NAP1L5Q96NT1 182 aaPredicted RBP15.61■□□□□ 0.09
RTN3-203ENST00000341307 ATP10AO60312 1499 aa15.61■□□□□ 0.09
RTN3-203ENST00000341307 ARHGEF40Q8TER5 1519 aa15.61■□□□□ 0.09
RTN3-203ENST00000341307 PDE4AP27815 886 aa15.61■□□□□ 0.09
RTN3-203ENST00000341307 GGT6Q6P531 493 aa15.61■□□□□ 0.09
RTN3-203ENST00000341307 POLR3GLQ9BT43 218 aa15.61■□□□□ 0.09
RTN3-203ENST00000341307 UHRF1BP1Q6BDS2 1440 aa15.61■□□□□ 0.09
RTN3-203ENST00000341307 CARD11Q9BXL7 1154 aa15.6■□□□□ 0.09
RTN3-203ENST00000341307 PRDM4Q9UKN5 801 aa15.6■□□□□ 0.09
RTN3-203ENST00000341307 INO80Q9ULG1 1556 aaPredicted RBP15.6■□□□□ 0.09
RTN3-203ENST00000341307 KIF3BO15066 747 aa15.59■□□□□ 0.09
RTN3-203ENST00000341307 BACH2Q9BYV9 841 aa15.59■□□□□ 0.09
RTN3-203ENST00000341307 RNF123Q5XPI4 1314 aa15.59■□□□□ 0.09
RTN3-203ENST00000341307 CNTLNQ9NXG0 1405 aa15.58■□□□□ 0.09
RTN3-203ENST00000341307 BCORL1Q5H9F3 1711 aa15.58■□□□□ 0.08
RTN3-203ENST00000341307 RALGAPBQ86X10 1494 aa15.58■□□□□ 0.08
RTN3-203ENST00000341307 AEBP2Q6ZN18 517 aaPredicted RBP15.56■□□□□ 0.08
RTN3-203ENST00000341307 A2MP01023 1474 aa15.56■□□□□ 0.08
RTN3-203ENST00000341307 E9PCH4 1651 aa15.56■□□□□ 0.08
RTN3-203ENST00000341307 BCL11BQ9C0K0 894 aaPredicted RBP15.56■□□□□ 0.08
RTN3-203ENST00000341307 TCERG1O14776 1098 aaKnown RBP15.55■□□□□ 0.08
RTN3-203ENST00000341307 PDIA4P13667 645 aaKnown RBP15.55■□□□□ 0.08
RTN3-203ENST00000341307 CNGB1Q14028 1251 aaPredicted RBP15.55■□□□□ 0.08
RTN3-203ENST00000341307 NBPF1Q3BBV0 1214 aa15.55■□□□□ 0.08
RTN3-203ENST00000341307 ROCK2O75116 1388 aaKnown RBP15.55■□□□□ 0.08
RTN3-203ENST00000341307 DHX29Q7Z478 1369 aaKnown RBP15.55■□□□□ 0.08
RTN3-203ENST00000341307 ST20-MTHFSA0A0A6YYL1 179 aa15.54■□□□□ 0.08
RTN3-203ENST00000341307 CEBPAP49715 358 aaPredicted RBP15.54■□□□□ 0.08
RTN3-203ENST00000341307 SMG6Q86US8 1419 aaKnown RBP15.53■□□□□ 0.08
RTN3-203ENST00000341307 PRAG1Q86YV5 1406 aa15.53■□□□□ 0.08
RTN3-203ENST00000341307 DDRGK1Q96HY6 314 aa15.53■□□□□ 0.08
RTN3-203ENST00000341307 DEPDC5O75140 1603 aa15.52■□□□□ 0.08
RTN3-203ENST00000341307 FRAT2O75474 233 aaPredicted RBP15.52■□□□□ 0.08
RTN3-203ENST00000341307 PNNQ9H307 717 aaKnown RBP15.52■□□□□ 0.08
RTN3-203ENST00000341307 POLR1AO95602 1720 aaPredicted RBP15.52■□□□□ 0.07
RTN3-203ENST00000341307 CALD1Q05682 793 aaKnown RBP15.52■□□□□ 0.07
RTN3-203ENST00000341307 FAM9BQ8IZU0 186 aa15.51■□□□□ 0.07
RTN3-203ENST00000341307 SLC4A3P48751 1232 aa15.5■□□□□ 0.07
RTN3-203ENST00000341307 TRPM1Q7Z4N2 1603 aa15.5■□□□□ 0.07
RTN3-203ENST00000341307 CLCN1P35523 988 aa15.5■□□□□ 0.07
RTN3-203ENST00000341307 MROH1Q8NDA8 1641 aa15.49■□□□□ 0.07
RTN3-203ENST00000341307 CENPJQ9HC77 1338 aaPredicted RBP15.49■□□□□ 0.07
RTN3-203ENST00000341307 KANK1Q14678 1352 aa15.49■□□□□ 0.07
RTN3-203ENST00000341307 RGS3P49796 1198 aa15.49■□□□□ 0.07
RTN3-203ENST00000341307 PRKRIP1Q9H875 184 aaPredicted RBP15.49■□□□□ 0.07
RTN3-203ENST00000341307 MS4A1P11836 297 aa15.47■□□□□ 0.07
RTN3-203ENST00000341307 VWDEQ8N2E2 1590 aa15.47■□□□□ 0.07
RTN3-203ENST00000341307 TET3O43151 1660 aa15.47■□□□□ 0.07
RTN3-203ENST00000341307 SPHKAPQ2M3C7 1700 aa15.47■□□□□ 0.07
RTN3-203ENST00000341307 TRPM2O94759 1503 aa15.46■□□□□ 0.07
RTN3-203ENST00000341307 PRDM15P57071 1507 aaPredicted RBP15.46■□□□□ 0.07
RTN3-203ENST00000341307 UGGT1Q9NYU2 1555 aa15.46■□□□□ 0.07
RTN3-203ENST00000341307 CLTCL1P53675 1640 aa15.46■□□□□ 0.07
RTN3-203ENST00000341307 MADDQ8WXG6 1647 aa15.46■□□□□ 0.07
RTN3-203ENST00000341307 EIF2AK4Q9P2K8 1649 aaKnown RBP15.46■□□□□ 0.06
RTN3-203ENST00000341307 PTPRTO14522 1441 aa15.45■□□□□ 0.06
RTN3-203ENST00000341307 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
RTN3-203ENST00000341307 ESF1Q9H501 851 aaKnown RBP15.44■□□□□ 0.06
RTN3-203ENST00000341307 REREQ9P2R6 1566 aa15.43■□□□□ 0.06
RTN3-203ENST00000341307 AGLP35573 1532 aa15.43■□□□□ 0.06
RTN3-203ENST00000341307 FBXO31Q5XUX0 539 aaPredicted RBP15.43■□□□□ 0.06
RTN3-203ENST00000341307 PDCL3Q9H2J4 239 aa15.42■□□□□ 0.06
RTN3-203ENST00000341307 ADAMTSL3P82987 1691 aa15.42■□□□□ 0.06
RTN3-203ENST00000341307 POGKQ9P215 609 aa15.42■□□□□ 0.06
RTN3-203ENST00000341307 CEP152O94986 1710 aa15.41■□□□□ 0.06
RTN3-203ENST00000341307 MRS2Q9HD23 443 aa15.41■□□□□ 0.06
RTN3-203ENST00000341307 GPRASP1Q5JY77 1395 aa15.4■□□□□ 0.06
RTN3-203ENST00000341307 RIMS1Q86UR5 1692 aaKnown RBP15.4■□□□□ 0.06
RTN3-203ENST00000341307 PTPRMP28827 1452 aa15.4■□□□□ 0.06
RTN3-203ENST00000341307 EFCAB6Q5THR3 1501 aa15.4■□□□□ 0.06
RTN3-203ENST00000341307 ZMYM3Q14202 1370 aa15.39■□□□□ 0.05
RTN3-203ENST00000341307 L1TD1Q5T7N2 865 aaKnown RBP15.38■□□□□ 0.05
RTN3-203ENST00000341307 CFAP65Q6ZU64 1925 aaKnown RBP15.37■□□□□ 0.05
RTN3-203ENST00000341307 TESK2Q96S53 571 aa15.37■□□□□ 0.05
RTN3-203ENST00000341307 RNF17Q9BXT8 1623 aaKnown RBP15.37■□□□□ 0.05
RTN3-203ENST00000341307 FER1L4A9Z1Z3 1794 aa15.37■□□□□ 0.05
RTN3-203ENST00000341307 DISP3Q9P2K9 1392 aa15.37■□□□□ 0.05
RTN3-203ENST00000341307 CLTCQ00610 1675 aaKnown RBP15.36■□□□□ 0.05
RTN3-203ENST00000341307 CHGAP10645 457 aaKnown RBP15.36■□□□□ 0.05
RTN3-203ENST00000341307 NPATQ14207 1427 aa15.35■□□□□ 0.05
RTN3-203ENST00000341307 EXOC6Q8TAG9 804 aa15.34■□□□□ 0.05
RTN3-203ENST00000341307 LAMC1P11047 1609 aa15.34■□□□□ 0.05
RTN3-203ENST00000341307 LMTK2Q8IWU2 1503 aa15.33■□□□□ 0.05
RTN3-203ENST00000341307 ADGRF5Q8IZF2 1346 aa15.33■□□□□ 0.04
RTN3-203ENST00000341307 MROH2AA6NES4 1674 aa15.33■□□□□ 0.04
RTN3-203ENST00000341307 XRCC6P12956 609 aaKnown RBP eCLIP15.32■□□□□ 0.04
RTN3-203ENST00000341307 ABCC3O15438 1527 aa15.32■□□□□ 0.04
RTN3-203ENST00000341307 CFAP70Q5T0N1 1121 aa15.32■□□□□ 0.04
RTN3-203ENST00000341307 SENP3-EIF4A1A0A087X0R7 540 aa15.31■□□□□ 0.04
RTN3-203ENST00000341307 HSPA2P54652 639 aa15.31■□□□□ 0.04
RTN3-203ENST00000341307 SKAP1Q86WV1 359 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms