RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 CHGAP10645 457 aaKnown RBP18.63■□□□□ 0.57
TRIM60-201ENST00000341062 TMEM131LA2VDJ0 1609 aa18.62■□□□□ 0.57
TRIM60-201ENST00000341062 RALGAPBQ86X10 1494 aa18.62■□□□□ 0.57
TRIM60-201ENST00000341062 ADGRB3O60242 1522 aa18.61■□□□□ 0.57
TRIM60-201ENST00000341062 C11orf95C9JLR9 678 aaPredicted RBP18.6■□□□□ 0.57
TRIM60-201ENST00000341062 NUTM2DQ5VT03 806 aaPredicted RBP18.6■□□□□ 0.57
TRIM60-201ENST00000341062 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
TRIM60-201ENST00000341062 UBR1Q8IWV7 1749 aa18.59■□□□□ 0.57
TRIM60-201ENST00000341062 SETD1BQ9UPS6 1966 aaKnown RBP18.57■□□□□ 0.56
TRIM60-201ENST00000341062 KIF7Q2M1P5 1343 aa18.57■□□□□ 0.56
TRIM60-201ENST00000341062 A2ML1A8K2U0 1454 aa18.57■□□□□ 0.56
TRIM60-201ENST00000341062 SLC52A1Q9NWF4 448 aa18.56■□□□□ 0.56
TRIM60-201ENST00000341062 USP47Q96K76 1375 aa18.56■□□□□ 0.56
TRIM60-201ENST00000341062 IFT172Q9UG01 1749 aa18.55■□□□□ 0.56
TRIM60-201ENST00000341062 KDM2AQ9Y2K7 1162 aa18.55■□□□□ 0.56
TRIM60-201ENST00000341062 CEP170BQ9Y4F5 1589 aaPredicted RBP18.54■□□□□ 0.56
TRIM60-201ENST00000341062 DCAF11Q8TEB1 546 aa18.54■□□□□ 0.56
TRIM60-201ENST00000341062 PPLO60437 1756 aa18.53■□□□□ 0.56
TRIM60-201ENST00000341062 ZNF326Q5BKZ1 582 aaKnown RBP18.53■□□□□ 0.56
TRIM60-201ENST00000341062 NEXMIFQ5QGS0 1516 aa18.52■□□□□ 0.56
TRIM60-201ENST00000341062 NLRP1Q9C000 1473 aa18.52■□□□□ 0.56
TRIM60-201ENST00000341062 PRKRIP1Q9H875 184 aaPredicted RBP18.52■□□□□ 0.55
TRIM60-201ENST00000341062 ZNF142P52746 1687 aaPredicted RBP18.52■□□□□ 0.55
TRIM60-201ENST00000341062 ADGRF5Q8IZF2 1346 aa18.5■□□□□ 0.55
TRIM60-201ENST00000341062 STAG3Q9UJ98 1225 aa18.5■□□□□ 0.55
TRIM60-201ENST00000341062 TRPM1Q7Z4N2 1603 aa18.49■□□□□ 0.55
TRIM60-201ENST00000341062 NEURL4Q96JN8 1562 aa18.49■□□□□ 0.55
TRIM60-201ENST00000341062 ZFYVE9O95405 1425 aa18.47■□□□□ 0.55
TRIM60-201ENST00000341062 LTKP29376 864 aa18.47■□□□□ 0.55
TRIM60-201ENST00000341062 KDM5AP29375 1690 aaKnown RBP18.46■□□□□ 0.55
TRIM60-201ENST00000341062 HSPA2P54652 639 aa18.46■□□□□ 0.55
TRIM60-201ENST00000341062 LAMC1P11047 1609 aa18.46■□□□□ 0.55
TRIM60-201ENST00000341062 ROCK2O75116 1388 aaKnown RBP18.46■□□□□ 0.55
TRIM60-201ENST00000341062 RIMS2Q9UQ26 1411 aa18.45■□□□□ 0.54
TRIM60-201ENST00000341062 LMTK3Q96Q04 1460 aa18.45■□□□□ 0.54
TRIM60-201ENST00000341062 TMEM2Q9UHN6 1383 aa18.44■□□□□ 0.54
TRIM60-201ENST00000341062 PRAG1Q86YV5 1406 aa18.44■□□□□ 0.54
TRIM60-201ENST00000341062 ARHGAP23Q9P227 1491 aa18.42■□□□□ 0.54
TRIM60-201ENST00000341062 CARD11Q9BXL7 1154 aa18.42■□□□□ 0.54
TRIM60-201ENST00000341062 SLIT1O75093 1534 aa18.41■□□□□ 0.54
TRIM60-201ENST00000341062 HNRNPUQ00839 825 aaKnown RBP eCLIP18.41■□□□□ 0.54
TRIM60-201ENST00000341062 NRXN1Q9ULB1 1477 aa18.4■□□□□ 0.54
TRIM60-201ENST00000341062 NRXN3Q9Y4C0 1643 aa18.4■□□□□ 0.54
TRIM60-201ENST00000341062 NBPF1Q3BBV0 1214 aa18.4■□□□□ 0.54
TRIM60-201ENST00000341062 MYOM2P54296 1465 aa18.4■□□□□ 0.54
TRIM60-201ENST00000341062 GPRASP1Q5JY77 1395 aa18.39■□□□□ 0.53
TRIM60-201ENST00000341062 IQGAP1P46940 1657 aa18.39■□□□□ 0.53
TRIM60-201ENST00000341062 PIK3C2GO75747 1445 aa18.38■□□□□ 0.53
TRIM60-201ENST00000341062 CCDC184Q52MB2 194 aa18.38■□□□□ 0.53
TRIM60-201ENST00000341062 CFAP70Q5T0N1 1121 aa18.38■□□□□ 0.53
TRIM60-201ENST00000341062 THEMISQ8N1K5 641 aaPredicted RBP18.38■□□□□ 0.53
TRIM60-201ENST00000341062 RPGRIP1LQ68CZ1 1315 aa18.37■□□□□ 0.53
TRIM60-201ENST00000341062 NEFLP07196 543 aa18.37■□□□□ 0.53
TRIM60-201ENST00000341062 TXNDC2Q86VQ3 553 aa18.37■□□□□ 0.53
TRIM60-201ENST00000341062 NCKAP5LQ9HCH0 1330 aa18.37■□□□□ 0.53
TRIM60-201ENST00000341062 FKBP8Q14318 412 aa18.37■□□□□ 0.53
TRIM60-201ENST00000341062 MRS2Q9HD23 443 aa18.36■□□□□ 0.53
TRIM60-201ENST00000341062 SETD1AO15047 1707 aaKnown RBP18.36■□□□□ 0.53
TRIM60-201ENST00000341062 ASXL1Q8IXJ9 1541 aa18.35■□□□□ 0.53
TRIM60-201ENST00000341062 STRCQ7RTU9 1775 aa18.34■□□□□ 0.53
TRIM60-201ENST00000341062 TMEM132EQ6IEE7 984 aa18.34■□□□□ 0.53
TRIM60-201ENST00000341062 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
TRIM60-201ENST00000341062 ST20-MTHFSA0A0A6YYL1 179 aa18.33■□□□□ 0.52
TRIM60-201ENST00000341062 VGFO15240 615 aaPredicted RBP18.33■□□□□ 0.52
TRIM60-201ENST00000341062 ALKQ9UM73 1620 aa18.32■□□□□ 0.52
TRIM60-201ENST00000341062 SLC26A8Q96RN1 970 aa18.32■□□□□ 0.52
TRIM60-201ENST00000341062 KTN1Q86UP2 1357 aaKnown RBP18.32■□□□□ 0.52
TRIM60-201ENST00000341062 ZBED9Q6R2W3 1325 aa18.32■□□□□ 0.52
TRIM60-201ENST00000341062 ADAMTS13Q76LX8 1427 aa18.31■□□□□ 0.52
TRIM60-201ENST00000341062 SETBP1Q9Y6X0 1596 aa18.3■□□□□ 0.52
TRIM60-201ENST00000341062 ADGRB1O14514 1584 aa18.29■□□□□ 0.52
TRIM60-201ENST00000341062 PLEKHG1Q9ULL1 1385 aa18.29■□□□□ 0.52
TRIM60-201ENST00000341062 C14orf93Q9H972 538 aaKnown RBP18.29■□□□□ 0.52
TRIM60-201ENST00000341062 METP08581 1390 aa18.29■□□□□ 0.52
TRIM60-201ENST00000341062 ANKLE2Q86XL3 938 aa18.29■□□□□ 0.52
TRIM60-201ENST00000341062 EID1Q9Y6B2 187 aa18.29■□□□□ 0.52
TRIM60-201ENST00000341062 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRIM60-201ENST00000341062 KIAA1210Q9ULL0 1709 aa18.27■□□□□ 0.52
TRIM60-201ENST00000341062 BCANQ96GW7 911 aa18.27■□□□□ 0.52
TRIM60-201ENST00000341062 FAM9BQ8IZU0 186 aa18.26■□□□□ 0.51
TRIM60-201ENST00000341062 MED14O60244 1454 aa18.26■□□□□ 0.51
TRIM60-201ENST00000341062 STAC3Q96MF2 364 aa18.24■□□□□ 0.51
TRIM60-201ENST00000341062 POLR3GLQ9BT43 218 aa18.24■□□□□ 0.51
TRIM60-201ENST00000341062 NPHP4O75161 1426 aaPredicted RBP18.24■□□□□ 0.51
TRIM60-201ENST00000341062 PTPRUQ92729 1446 aa18.24■□□□□ 0.51
TRIM60-201ENST00000341062 STK26Q9P289 416 aa18.22■□□□□ 0.51
TRIM60-201ENST00000341062 HDGFP51858 240 aaKnown RBP18.21■□□□□ 0.51
TRIM60-201ENST00000341062 RALBP1Q15311 655 aa18.21■□□□□ 0.51
TRIM60-201ENST00000341062 ERICH6BQ5W0A0 696 aa18.21■□□□□ 0.51
TRIM60-201ENST00000341062 TRAK1Q9UPV9 953 aa18.2■□□□□ 0.5
TRIM60-201ENST00000341062 BRD4O60885 1362 aaPredicted RBP18.2■□□□□ 0.5
TRIM60-201ENST00000341062 TESK2Q96S53 571 aa18.2■□□□□ 0.5
TRIM60-201ENST00000341062 STRCP1A6NGW2 1772 aa18.19■□□□□ 0.5
TRIM60-201ENST00000341062 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
TRIM60-201ENST00000341062 TSHZ2Q9NRE2 1034 aa18.18■□□□□ 0.5
TRIM60-201ENST00000341062 YTHDC2Q9H6S0 1430 aaKnown RBP18.18■□□□□ 0.5
TRIM60-201ENST00000341062 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
TRIM60-201ENST00000341062 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
TRIM60-201ENST00000341062 PNISRQ8TF01 805 aaKnown RBP18.17■□□□□ 0.5
TRIM60-201ENST00000341062 CHD2O14647 1828 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms