RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 KANK1Q14678 1352 aa25.95■■□□□ 1.75
NECTIN1-202ENST00000340882 LRP6O75581 1613 aa25.95■■□□□ 1.74
NECTIN1-202ENST00000340882 DAPK1P53355 1430 aa25.94■■□□□ 1.74
NECTIN1-202ENST00000340882 BCANQ96GW7 911 aa25.9■■□□□ 1.74
NECTIN1-202ENST00000340882 CHIC2Q9UKJ5 165 aa25.89■■□□□ 1.74
NECTIN1-202ENST00000340882 ZFYVE9O95405 1425 aa25.88■■□□□ 1.73
NECTIN1-202ENST00000340882 UPF1Q92900 1129 aaKnown RBP eCLIP25.88■■□□□ 1.73
NECTIN1-202ENST00000340882 GCC2Q8IWJ2 1684 aa25.87■■□□□ 1.73
NECTIN1-202ENST00000340882 LOC105371045A0A1W2PR82 267 aa25.86■■□□□ 1.73
NECTIN1-202ENST00000340882 TRIM52Q96A61 297 aa25.84■■□□□ 1.73
NECTIN1-202ENST00000340882 PLEKHG1Q9ULL1 1385 aa25.83■■□□□ 1.73
NECTIN1-202ENST00000340882 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.83■■□□□ 1.73
NECTIN1-202ENST00000340882 SLC52A1Q9NWF4 448 aa25.83■■□□□ 1.73
NECTIN1-202ENST00000340882 SHPRHQ149N8 1683 aa25.83■■□□□ 1.73
NECTIN1-202ENST00000340882 TMEM131LA2VDJ0 1609 aa25.82■■□□□ 1.72
NECTIN1-202ENST00000340882 ANKRD30AQ9BXX3 1397 aa25.82■■□□□ 1.72
NECTIN1-202ENST00000340882 RIMS2Q9UQ26 1411 aa25.81■■□□□ 1.72
NECTIN1-202ENST00000340882 SPATA31A6Q5VVP1 1343 aa25.81■■□□□ 1.72
NECTIN1-202ENST00000340882 FGD6Q6ZV73 1430 aa25.8■■□□□ 1.72
NECTIN1-202ENST00000340882 AHDC1Q5TGY3 1603 aaPredicted RBP25.8■■□□□ 1.72
NECTIN1-202ENST00000340882 MEX3CQ5U5Q3 659 aaKnown RBP25.79■■□□□ 1.72
NECTIN1-202ENST00000340882 ZNF772Q68DY9 489 aaPredicted RBP25.77■■□□□ 1.72
NECTIN1-202ENST00000340882 TBX22Q9Y458 520 aa25.76■■□□□ 1.71
NECTIN1-202ENST00000340882 DIP2AQ14689 1571 aa25.75■■□□□ 1.71
NECTIN1-202ENST00000340882 ADAMTS13Q76LX8 1427 aa25.75■■□□□ 1.71
NECTIN1-202ENST00000340882 NCOA3Q9Y6Q9 1424 aa25.75■■□□□ 1.71
NECTIN1-202ENST00000340882 PPP1R15AO75807 674 aaPredicted RBP25.75■■□□□ 1.71
NECTIN1-202ENST00000340882 RPRD2Q5VT52 1461 aaKnown RBP25.74■■□□□ 1.71
NECTIN1-202ENST00000340882 NUTM2DQ5VT03 806 aaPredicted RBP25.74■■□□□ 1.71
NECTIN1-202ENST00000340882 C14orf37Q86TY3 774 aa25.73■■□□□ 1.71
NECTIN1-202ENST00000340882 ADGRL2O95490 1459 aa25.72■■□□□ 1.71
NECTIN1-202ENST00000340882 RXRBP28702 533 aa25.7■■□□□ 1.7
NECTIN1-202ENST00000340882 C19orf44Q9H6X5 657 aa25.7■■□□□ 1.7
NECTIN1-202ENST00000340882 CADPS2Q86UW7 1296 aa25.69■■□□□ 1.7
NECTIN1-202ENST00000340882 NUTM2BA6NNL0 878 aaPredicted RBP25.68■■□□□ 1.7
NECTIN1-202ENST00000340882 NUTM2EB1AL46 878 aaPredicted RBP25.68■■□□□ 1.7
NECTIN1-202ENST00000340882 BRINP3Q76B58 766 aa25.68■■□□□ 1.7
NECTIN1-202ENST00000340882 NUTM2AQ8IVF1 878 aaPredicted RBP25.68■■□□□ 1.7
NECTIN1-202ENST00000340882 ATF3P18847 181 aa25.67■■□□□ 1.7
NECTIN1-202ENST00000340882 PTPRUQ92729 1446 aa25.67■■□□□ 1.7
NECTIN1-202ENST00000340882 CHGAP10645 457 aaKnown RBP25.66■■□□□ 1.7
NECTIN1-202ENST00000340882 HDGFP51858 240 aaKnown RBP25.66■■□□□ 1.7
NECTIN1-202ENST00000340882 E9PCH4 1651 aa25.66■■□□□ 1.7
NECTIN1-202ENST00000340882 ANKRD50Q9ULJ7 1429 aa25.65■■□□□ 1.7
NECTIN1-202ENST00000340882 CDK12Q9NYV4 1490 aaPredicted RBP25.65■■□□□ 1.7
NECTIN1-202ENST00000340882 AFF2P51816 1311 aa25.63■■□□□ 1.69
NECTIN1-202ENST00000340882 PIK3R4Q99570 1358 aa25.62■■□□□ 1.69
NECTIN1-202ENST00000340882 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.62■■□□□ 1.69
NECTIN1-202ENST00000340882 AMOTL2Q9Y2J4 779 aa25.61■■□□□ 1.69
NECTIN1-202ENST00000340882 NHSL1Q5SYE7 1610 aa25.61■■□□□ 1.69
NECTIN1-202ENST00000340882 ASXL1Q8IXJ9 1541 aa25.61■■□□□ 1.69
NECTIN1-202ENST00000340882 UNC13BO14795 1591 aa25.61■■□□□ 1.69
NECTIN1-202ENST00000340882 TRPM2O94759 1503 aa25.6■■□□□ 1.69
NECTIN1-202ENST00000340882 SRCAPQ6ZRS2 3230 aa25.58■■□□□ 1.69
NECTIN1-202ENST00000340882 RGS12O14924 1447 aa25.58■■□□□ 1.69
NECTIN1-202ENST00000340882 APLP2Q06481 763 aa25.58■■□□□ 1.69
NECTIN1-202ENST00000340882 SETD5Q9C0A6 1442 aa25.57■■□□□ 1.68
NECTIN1-202ENST00000340882 NRXN3Q9Y4C0 1643 aa25.57■■□□□ 1.68
NECTIN1-202ENST00000340882 XRN1Q8IZH2 1706 aaKnown RBP25.57■■□□□ 1.68
NECTIN1-202ENST00000340882 MST1RQ04912 1400 aa25.55■■□□□ 1.68
NECTIN1-202ENST00000340882 FAM50AQ14320 339 aaKnown RBP25.55■■□□□ 1.68
NECTIN1-202ENST00000340882 DDX17Q92841 729 aaKnown RBP25.55■■□□□ 1.68
NECTIN1-202ENST00000340882 DCCP43146 1447 aa25.54■■□□□ 1.68
NECTIN1-202ENST00000340882 C8orf37Q96NL8 207 aa25.51■■□□□ 1.67
NECTIN1-202ENST00000340882 QTRT2Q9H974 415 aaKnown RBP25.51■■□□□ 1.67
NECTIN1-202ENST00000340882 IQGAP3Q86VI3 1631 aa25.51■■□□□ 1.67
NECTIN1-202ENST00000340882 PNPLA6Q8IY17 1366 aa25.49■■□□□ 1.67
NECTIN1-202ENST00000340882 RBM6P78332 1123 aaKnown RBP25.48■■□□□ 1.67
NECTIN1-202ENST00000340882 LRRC59Q96AG4 307 aaKnown RBP25.47■■□□□ 1.67
NECTIN1-202ENST00000340882 SETBP1Q9Y6X0 1596 aa25.47■■□□□ 1.67
NECTIN1-202ENST00000340882 NALCNQ8IZF0 1738 aa25.46■■□□□ 1.67
NECTIN1-202ENST00000340882 METP08581 1390 aa25.45■■□□□ 1.67
NECTIN1-202ENST00000340882 ADGRL3Q9HAR2 1447 aa25.4■■□□□ 1.66
NECTIN1-202ENST00000340882 ADAMTS2O95450 1211 aa25.4■■□□□ 1.66
NECTIN1-202ENST00000340882 SPHKAPQ2M3C7 1700 aa25.38■■□□□ 1.65
NECTIN1-202ENST00000340882 NGLY1Q96IV0 654 aa25.38■■□□□ 1.65
NECTIN1-202ENST00000340882 NUP155O75694 1391 aa25.37■■□□□ 1.65
NECTIN1-202ENST00000340882 LAMC1P11047 1609 aa25.37■■□□□ 1.65
NECTIN1-202ENST00000340882 C1orf167Q5SNV9 1468 aa25.34■■□□□ 1.65
NECTIN1-202ENST00000340882 EP400Q96L91 3159 aa25.34■■□□□ 1.65
NECTIN1-202ENST00000340882 ATAD2Q6PL18 1390 aa25.33■■□□□ 1.65
NECTIN1-202ENST00000340882 ROCK1Q13464 1354 aa25.32■■□□□ 1.64
NECTIN1-202ENST00000340882 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
NECTIN1-202ENST00000340882 USP21Q9UK80 565 aa25.31■■□□□ 1.64
NECTIN1-202ENST00000340882 NEXMIFQ5QGS0 1516 aa25.31■■□□□ 1.64
NECTIN1-202ENST00000340882 ORAI2Q96SN7 254 aa25.3■■□□□ 1.64
NECTIN1-202ENST00000340882 SOS2Q07890 1332 aaPredicted RBP25.29■■□□□ 1.64
NECTIN1-202ENST00000340882 CLTCL1P53675 1640 aa25.28■■□□□ 1.64
NECTIN1-202ENST00000340882 ATRNO75882 1429 aa25.27■■□□□ 1.64
NECTIN1-202ENST00000340882 FNBP4Q8N3X1 1017 aaPredicted RBP25.26■■□□□ 1.63
NECTIN1-202ENST00000340882 TRPC5Q9UL62 973 aaPredicted RBP25.26■■□□□ 1.63
NECTIN1-202ENST00000340882 COL22A1Q8NFW1 1626 aaPredicted RBP25.26■■□□□ 1.63
NECTIN1-202ENST00000340882 PTCH1Q13635 1447 aa25.23■■□□□ 1.63
NECTIN1-202ENST00000340882 ROBO2Q9HCK4 1378 aa25.23■■□□□ 1.63
NECTIN1-202ENST00000340882 ZRANB1Q9UGI0 708 aa25.23■■□□□ 1.63
NECTIN1-202ENST00000340882 MARF1Q9Y4F3 1742 aaKnown RBP25.22■■□□□ 1.63
NECTIN1-202ENST00000340882 ITGAEP38570 1179 aa25.21■■□□□ 1.63
NECTIN1-202ENST00000340882 KIF1BO60333 1816 aa25.21■■□□□ 1.63
NECTIN1-202ENST00000340882 BCL9LQ86UU0 1499 aa25.19■■□□□ 1.62
NECTIN1-202ENST00000340882 MYOM2P54296 1465 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 761.8 ms