RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 TRAK2O60296 914 aa18.38■□□□□ 0.53
RRP1B-201ENST00000340648 DAPK1P53355 1430 aa18.38■□□□□ 0.53
RRP1B-201ENST00000340648 CDK11BP21127 795 aaKnown RBP18.38■□□□□ 0.53
RRP1B-201ENST00000340648 MAP3K1Q13233 1512 aa18.37■□□□□ 0.53
RRP1B-201ENST00000340648 MRE11P49959 708 aa18.37■□□□□ 0.53
RRP1B-201ENST00000340648 FAM43AQ8N2R8 423 aa18.37■□□□□ 0.53
RRP1B-201ENST00000340648 PTPRGP23470 1445 aa18.37■□□□□ 0.53
RRP1B-201ENST00000340648 STK31Q9BXU1 1019 aa18.37■□□□□ 0.53
RRP1B-201ENST00000340648 SUPT6HQ7KZ85 1726 aaKnown RBP18.36■□□□□ 0.53
RRP1B-201ENST00000340648 LMOD2Q6P5Q4 547 aa18.36■□□□□ 0.53
RRP1B-201ENST00000340648 RIPK4P57078 832 aa18.36■□□□□ 0.53
RRP1B-201ENST00000340648 C20orf194Q5TEA3 1177 aa18.36■□□□□ 0.53
RRP1B-201ENST00000340648 ANKRD30BQ9BXX2 1392 aa18.35■□□□□ 0.53
RRP1B-201ENST00000340648 LMOD3Q0VAK6 560 aa18.35■□□□□ 0.53
RRP1B-201ENST00000340648 TCP11L2Q8N4U5 519 aa18.35■□□□□ 0.53
RRP1B-201ENST00000340648 EVC2Q86UK5 1308 aa18.35■□□□□ 0.53
RRP1B-201ENST00000340648 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
RRP1B-201ENST00000340648 AAMPQ13685 434 aa18.33■□□□□ 0.53
RRP1B-201ENST00000340648 AMER1Q5JTC6 1135 aaPredicted RBP18.33■□□□□ 0.53
RRP1B-201ENST00000340648 PHF14O94880 888 aa18.33■□□□□ 0.52
RRP1B-201ENST00000340648 FAM13BQ9NYF5 915 aa18.32■□□□□ 0.52
RRP1B-201ENST00000340648 RILPL2Q969X0 211 aa18.31■□□□□ 0.52
RRP1B-201ENST00000340648 A0A0G2JS52 829 aa18.31■□□□□ 0.52
RRP1B-201ENST00000340648 MCTP1Q6DN14 999 aa18.31■□□□□ 0.52
RRP1B-201ENST00000340648 POLA1P09884 1462 aaPredicted RBP18.3■□□□□ 0.52
RRP1B-201ENST00000340648 PRG4Q92954 1404 aaPredicted RBP18.3■□□□□ 0.52
RRP1B-201ENST00000340648 DIAPH1O60610 1272 aaKnown RBP18.3■□□□□ 0.52
RRP1B-201ENST00000340648 MTHFSP49914 203 aa18.3■□□□□ 0.52
RRP1B-201ENST00000340648 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
RRP1B-201ENST00000340648 KIF16BQ96L93 1317 aa18.29■□□□□ 0.52
RRP1B-201ENST00000340648 CDK13Q14004 1512 aaKnown RBP18.29■□□□□ 0.52
RRP1B-201ENST00000340648 C9orf84Q5VXU9 1444 aa18.28■□□□□ 0.52
RRP1B-201ENST00000340648 PTPN23Q9H3S7 1636 aa18.28■□□□□ 0.52
RRP1B-201ENST00000340648 PRKCSHP14314 528 aaPredicted RBP18.28■□□□□ 0.52
RRP1B-201ENST00000340648 NASPP49321 788 aaPredicted RBP18.27■□□□□ 0.52
RRP1B-201ENST00000340648 ERBINQ96RT1 1412 aa18.27■□□□□ 0.52
RRP1B-201ENST00000340648 CFAP70Q5T0N1 1121 aa18.27■□□□□ 0.52
RRP1B-201ENST00000340648 HECW1Q76N89 1606 aa18.27■□□□□ 0.51
RRP1B-201ENST00000340648 REC8O95072 547 aa18.26■□□□□ 0.51
RRP1B-201ENST00000340648 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
RRP1B-201ENST00000340648 ROCK1Q13464 1354 aa18.26■□□□□ 0.51
RRP1B-201ENST00000340648 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.26■□□□□ 0.51
RRP1B-201ENST00000340648 CSPP1Q1MSJ5 1256 aa18.25■□□□□ 0.51
RRP1B-201ENST00000340648 GGNBP2Q9H3C7 697 aa18.25■□□□□ 0.51
RRP1B-201ENST00000340648 NESP48681 1621 aa18.25■□□□□ 0.51
RRP1B-201ENST00000340648 NUCB2P80303 420 aa18.25■□□□□ 0.51
RRP1B-201ENST00000340648 HDGFP51858 240 aaKnown RBP18.24■□□□□ 0.51
RRP1B-201ENST00000340648 EXOSC9Q06265 439 aaKnown RBP18.24■□□□□ 0.51
RRP1B-201ENST00000340648 SLFN5Q08AF3 891 aa18.24■□□□□ 0.51
RRP1B-201ENST00000340648 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
RRP1B-201ENST00000340648 EPRSP07814 1512 aaKnown RBP18.24■□□□□ 0.51
RRP1B-201ENST00000340648 VGFO15240 615 aaPredicted RBP18.24■□□□□ 0.51
RRP1B-201ENST00000340648 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
RRP1B-201ENST00000340648 API5Q9BZZ5 524 aaKnown RBP18.23■□□□□ 0.51
RRP1B-201ENST00000340648 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
RRP1B-201ENST00000340648 STAC3Q96MF2 364 aa18.23■□□□□ 0.51
RRP1B-201ENST00000340648 NUTM2FA1L443 756 aa18.22■□□□□ 0.51
RRP1B-201ENST00000340648 PTPRKQ15262 1439 aa18.22■□□□□ 0.51
RRP1B-201ENST00000340648 R3HCC1Q9Y3T6 440 aaKnown RBP18.22■□□□□ 0.51
RRP1B-201ENST00000340648 TROQ12816 1431 aaPredicted RBP18.22■□□□□ 0.51
RRP1B-201ENST00000340648 RPRD2Q5VT52 1461 aaKnown RBP18.22■□□□□ 0.51
RRP1B-201ENST00000340648 HTATSF1O43719 755 aaKnown RBP18.22■□□□□ 0.51
RRP1B-201ENST00000340648 INTS3Q68E01 1043 aaKnown RBP18.21■□□□□ 0.51
RRP1B-201ENST00000340648 CDC45O75419 566 aa18.21■□□□□ 0.51
RRP1B-201ENST00000340648 MCM4P33991 863 aa18.21■□□□□ 0.51
RRP1B-201ENST00000340648 HMOX1P09601 288 aa18.21■□□□□ 0.51
RRP1B-201ENST00000340648 CAVIN1Q6NZI2 390 aaKnown RBP18.2■□□□□ 0.5
RRP1B-201ENST00000340648 CABP2Q9NPB3 220 aa18.2■□□□□ 0.5
RRP1B-201ENST00000340648 ABCC5O15440 1437 aa18.2■□□□□ 0.5
RRP1B-201ENST00000340648 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
RRP1B-201ENST00000340648 GPATCH3Q96I76 525 aa18.19■□□□□ 0.5
RRP1B-201ENST00000340648 C1orf115Q9H7X2 142 aa18.19■□□□□ 0.5
RRP1B-201ENST00000340648 GRPEL1Q9HAV7 217 aa18.19■□□□□ 0.5
RRP1B-201ENST00000340648 ANO2Q9NQ90 1003 aa18.19■□□□□ 0.5
RRP1B-201ENST00000340648 RNF214Q8ND24 703 aa18.19■□□□□ 0.5
RRP1B-201ENST00000340648 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
RRP1B-201ENST00000340648 COG3Q96JB2 828 aa18.18■□□□□ 0.5
RRP1B-201ENST00000340648 NOB1Q9ULX3 412 aaKnown RBP18.18■□□□□ 0.5
RRP1B-201ENST00000340648 SLC12A5Q9H2X9 1139 aa18.17■□□□□ 0.5
RRP1B-201ENST00000340648 NINLQ9Y2I6 1382 aa18.17■□□□□ 0.5
RRP1B-201ENST00000340648 MVPQ14764 893 aaKnown RBP18.17■□□□□ 0.5
RRP1B-201ENST00000340648 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
RRP1B-201ENST00000340648 ATP6V1DQ9Y5K8 247 aa18.16■□□□□ 0.5
RRP1B-201ENST00000340648 GNAI1P63096 354 aa18.16■□□□□ 0.5
RRP1B-201ENST00000340648 GNL2Q13823 731 aaKnown RBP18.16■□□□□ 0.5
RRP1B-201ENST00000340648 AMPHP49418 695 aa18.15■□□□□ 0.5
RRP1B-201ENST00000340648 WWC1Q8IX03 1113 aa18.15■□□□□ 0.5
RRP1B-201ENST00000340648 LTV1Q96GA3 475 aaPredicted RBP18.15■□□□□ 0.5
RRP1B-201ENST00000340648 ARHGAP5Q13017 1502 aa18.15■□□□□ 0.5
RRP1B-201ENST00000340648 CHMP3Q9Y3E7 222 aa18.14■□□□□ 0.49
RRP1B-201ENST00000340648 AFAP1Q8N556 730 aa18.14■□□□□ 0.49
RRP1B-201ENST00000340648 ABCA10Q8WWZ4 1543 aa18.14■□□□□ 0.49
RRP1B-201ENST00000340648 DUSP27Q5VZP5 1158 aa18.13■□□□□ 0.49
RRP1B-201ENST00000340648 NECTIN2Q92692 538 aa18.13■□□□□ 0.49
RRP1B-201ENST00000340648 PRPF40AO75400 957 aaKnown RBP18.13■□□□□ 0.49
RRP1B-201ENST00000340648 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
RRP1B-201ENST00000340648 CCDC173Q0VFZ6 552 aa18.13■□□□□ 0.49
RRP1B-201ENST00000340648 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
RRP1B-201ENST00000340648 TPM2P07951 284 aa18.12■□□□□ 0.49
RRP1B-201ENST00000340648 BICRAQ9NZM4 1560 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms