RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 KDM5AP29375 1690 aaKnown RBP19.06■□□□□ 0.64
GTF2F2-201ENST00000340473 STAC3Q96MF2 364 aa19.04■□□□□ 0.64
GTF2F2-201ENST00000340473 ADGRF5Q8IZF2 1346 aa19.04■□□□□ 0.64
GTF2F2-201ENST00000340473 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
GTF2F2-201ENST00000340473 NRXN1Q9ULB1 1477 aa19.03■□□□□ 0.64
GTF2F2-201ENST00000340473 CEP170BQ9Y4F5 1589 aaPredicted RBP19.01■□□□□ 0.63
GTF2F2-201ENST00000340473 TRPM1Q7Z4N2 1603 aa19.01■□□□□ 0.63
GTF2F2-201ENST00000340473 RALGAPBQ86X10 1494 aa19.01■□□□□ 0.63
GTF2F2-201ENST00000340473 SETD1BQ9UPS6 1966 aaKnown RBP19■□□□□ 0.63
GTF2F2-201ENST00000340473 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
GTF2F2-201ENST00000340473 ZFYVE9O95405 1425 aa19■□□□□ 0.63
GTF2F2-201ENST00000340473 ZNF142P52746 1687 aaPredicted RBP18.99■□□□□ 0.63
GTF2F2-201ENST00000340473 VGFO15240 615 aaPredicted RBP18.98■□□□□ 0.63
GTF2F2-201ENST00000340473 PIK3C2GO75747 1445 aa18.98■□□□□ 0.63
GTF2F2-201ENST00000340473 TMEM2Q9UHN6 1383 aa18.98■□□□□ 0.63
GTF2F2-201ENST00000340473 NBPF1Q3BBV0 1214 aa18.96■□□□□ 0.63
GTF2F2-201ENST00000340473 ROCK2O75116 1388 aaKnown RBP18.95■□□□□ 0.62
GTF2F2-201ENST00000340473 SLIT1O75093 1534 aa18.94■□□□□ 0.62
GTF2F2-201ENST00000340473 THEMISQ8N1K5 641 aaPredicted RBP18.94■□□□□ 0.62
GTF2F2-201ENST00000340473 KIAA1210Q9ULL0 1709 aa18.94■□□□□ 0.62
GTF2F2-201ENST00000340473 ARHGAP23Q9P227 1491 aa18.94■□□□□ 0.62
GTF2F2-201ENST00000340473 CFAP70Q5T0N1 1121 aa18.93■□□□□ 0.62
GTF2F2-201ENST00000340473 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
GTF2F2-201ENST00000340473 GPRASP1Q5JY77 1395 aa18.92■□□□□ 0.62
GTF2F2-201ENST00000340473 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.92■□□□□ 0.62
GTF2F2-201ENST00000340473 CARD11Q9BXL7 1154 aa18.92■□□□□ 0.62
GTF2F2-201ENST00000340473 LTKP29376 864 aa18.91■□□□□ 0.62
GTF2F2-201ENST00000340473 C14orf93Q9H972 538 aaKnown RBP18.9■□□□□ 0.62
GTF2F2-201ENST00000340473 HDGFP51858 240 aaKnown RBP18.9■□□□□ 0.62
GTF2F2-201ENST00000340473 LAMC1P11047 1609 aa18.89■□□□□ 0.61
GTF2F2-201ENST00000340473 TXNDC2Q86VQ3 553 aa18.89■□□□□ 0.61
GTF2F2-201ENST00000340473 HIRIP3Q9BW71 556 aaPredicted RBP18.88■□□□□ 0.61
GTF2F2-201ENST00000340473 NRXN3Q9Y4C0 1643 aa18.88■□□□□ 0.61
GTF2F2-201ENST00000340473 USP47Q96K76 1375 aa18.87■□□□□ 0.61
GTF2F2-201ENST00000340473 HSPA5P11021 654 aaKnown RBP18.87■□□□□ 0.61
GTF2F2-201ENST00000340473 EIF4G2P78344 907 aaKnown RBP eCLIP18.87■□□□□ 0.61
GTF2F2-201ENST00000340473 EID1Q9Y6B2 187 aa18.87■□□□□ 0.61
GTF2F2-201ENST00000340473 ADGRB1O14514 1584 aa18.87■□□□□ 0.61
GTF2F2-201ENST00000340473 SETBP1Q9Y6X0 1596 aa18.87■□□□□ 0.61
GTF2F2-201ENST00000340473 ALKQ9UM73 1620 aa18.87■□□□□ 0.61
GTF2F2-201ENST00000340473 IQGAP1P46940 1657 aa18.86■□□□□ 0.61
GTF2F2-201ENST00000340473 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
GTF2F2-201ENST00000340473 SCAF11Q99590 1463 aaKnown RBP18.86■□□□□ 0.61
GTF2F2-201ENST00000340473 PLEKHG1Q9ULL1 1385 aa18.85■□□□□ 0.61
GTF2F2-201ENST00000340473 TMEM132EQ6IEE7 984 aa18.84■□□□□ 0.61
GTF2F2-201ENST00000340473 SETD1AO15047 1707 aaKnown RBP18.84■□□□□ 0.61
GTF2F2-201ENST00000340473 ASXL1Q8IXJ9 1541 aa18.84■□□□□ 0.61
GTF2F2-201ENST00000340473 ADAMTS13Q76LX8 1427 aa18.81■□□□□ 0.6
GTF2F2-201ENST00000340473 ANKLE2Q86XL3 938 aa18.81■□□□□ 0.6
GTF2F2-201ENST00000340473 BCANQ96GW7 911 aa18.81■□□□□ 0.6
GTF2F2-201ENST00000340473 LMTK3Q96Q04 1460 aa18.8■□□□□ 0.6
GTF2F2-201ENST00000340473 ST20-MTHFSA0A0A6YYL1 179 aa18.78■□□□□ 0.6
GTF2F2-201ENST00000340473 METP08581 1390 aa18.78■□□□□ 0.6
GTF2F2-201ENST00000340473 MED14O60244 1454 aa18.78■□□□□ 0.6
GTF2F2-201ENST00000340473 POLR1AO95602 1720 aaPredicted RBP18.78■□□□□ 0.6
GTF2F2-201ENST00000340473 HSPA2P54652 639 aa18.77■□□□□ 0.59
GTF2F2-201ENST00000340473 SLC26A8Q96RN1 970 aa18.76■□□□□ 0.59
GTF2F2-201ENST00000340473 YTHDC2Q9H6S0 1430 aaKnown RBP18.76■□□□□ 0.59
GTF2F2-201ENST00000340473 TRAK1Q9UPV9 953 aa18.76■□□□□ 0.59
GTF2F2-201ENST00000340473 NCKAP5LQ9HCH0 1330 aa18.75■□□□□ 0.59
GTF2F2-201ENST00000340473 EIF3AQ14152 1382 aaKnown RBP18.74■□□□□ 0.59
GTF2F2-201ENST00000340473 STK26Q9P289 416 aa18.74■□□□□ 0.59
GTF2F2-201ENST00000340473 DIP2AQ14689 1571 aa18.74■□□□□ 0.59
GTF2F2-201ENST00000340473 NPHP4O75161 1426 aaPredicted RBP18.73■□□□□ 0.59
GTF2F2-201ENST00000340473 ARHGEF28Q8N1W1 1705 aaKnown RBP18.73■□□□□ 0.59
GTF2F2-201ENST00000340473 TBX22Q9Y458 520 aa18.72■□□□□ 0.59
GTF2F2-201ENST00000340473 LRPPRCP42704 1394 aaKnown RBP18.72■□□□□ 0.59
GTF2F2-201ENST00000340473 TESK2Q96S53 571 aa18.72■□□□□ 0.59
GTF2F2-201ENST00000340473 C11orf95C9JLR9 678 aaPredicted RBP18.71■□□□□ 0.59
GTF2F2-201ENST00000340473 PTPRUQ92729 1446 aa18.69■□□□□ 0.58
GTF2F2-201ENST00000340473 ABCC11Q96J66 1382 aa18.69■□□□□ 0.58
GTF2F2-201ENST00000340473 CENPJQ9HC77 1338 aaPredicted RBP18.68■□□□□ 0.58
GTF2F2-201ENST00000340473 DLC1Q96QB1 1528 aa18.68■□□□□ 0.58
GTF2F2-201ENST00000340473 KNDC1Q76NI1 1749 aa18.67■□□□□ 0.58
GTF2F2-201ENST00000340473 WASHC2AQ641Q2 1341 aa18.67■□□□□ 0.58
GTF2F2-201ENST00000340473 QRICH2Q9H0J4 1663 aa18.67■□□□□ 0.58
GTF2F2-201ENST00000340473 TECPR2O15040 1411 aa18.66■□□□□ 0.58
GTF2F2-201ENST00000340473 STRCQ7RTU9 1775 aa18.66■□□□□ 0.58
GTF2F2-201ENST00000340473 PRAM1Q96QH2 718 aa18.65■□□□□ 0.58
GTF2F2-201ENST00000340473 CPS1P31327 1500 aa18.65■□□□□ 0.58
GTF2F2-201ENST00000340473 KIF7Q2M1P5 1343 aa18.65■□□□□ 0.58
GTF2F2-201ENST00000340473 CCDC7Q96M83 1385 aa18.65■□□□□ 0.58
GTF2F2-201ENST00000340473 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
GTF2F2-201ENST00000340473 PIK3R4Q99570 1358 aa18.64■□□□□ 0.57
GTF2F2-201ENST00000340473 SAFB2Q14151 953 aaKnown RBP eCLIP18.64■□□□□ 0.57
GTF2F2-201ENST00000340473 AMOTL2Q9Y2J4 779 aa18.64■□□□□ 0.57
GTF2F2-201ENST00000340473 PLEKHH1Q9ULM0 1364 aa18.63■□□□□ 0.57
GTF2F2-201ENST00000340473 SBNO2Q9Y2G9 1366 aa18.63■□□□□ 0.57
GTF2F2-201ENST00000340473 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
GTF2F2-201ENST00000340473 ROBO2Q9HCK4 1378 aa18.63■□□□□ 0.57
GTF2F2-201ENST00000340473 WAPLQ7Z5K2 1190 aa18.62■□□□□ 0.57
GTF2F2-201ENST00000340473 POGKQ9P215 609 aa18.62■□□□□ 0.57
GTF2F2-201ENST00000340473 CHD2O14647 1828 aaKnown RBP18.62■□□□□ 0.57
GTF2F2-201ENST00000340473 TMF1P82094 1093 aa18.61■□□□□ 0.57
GTF2F2-201ENST00000340473 FAM135BQ49AJ0 1406 aa18.61■□□□□ 0.57
GTF2F2-201ENST00000340473 SIRT1Q96EB6 747 aa18.6■□□□□ 0.57
GTF2F2-201ENST00000340473 PTCH1Q13635 1447 aa18.59■□□□□ 0.57
GTF2F2-201ENST00000340473 KCNA6P17658 529 aa18.59■□□□□ 0.57
GTF2F2-201ENST00000340473 POLR3GLQ9BT43 218 aa18.58■□□□□ 0.57
GTF2F2-201ENST00000340473 DDX10Q13206 875 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms