RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 NLRP1Q9C000 1473 aa11.16□□□□□ -0.62
TMC1-202ENST00000340019 UBR1Q8IWV7 1749 aa11.16□□□□□ -0.62
TMC1-202ENST00000340019 ZNF326Q5BKZ1 582 aaKnown RBP11.15□□□□□ -0.62
TMC1-202ENST00000340019 KIAA1210Q9ULL0 1709 aa11.15□□□□□ -0.63
TMC1-202ENST00000340019 MYO3AQ8NEV4 1616 aa11.14□□□□□ -0.63
TMC1-202ENST00000340019 ZFYVE9O95405 1425 aa11.14□□□□□ -0.63
TMC1-202ENST00000340019 LAMC1P11047 1609 aa11.13□□□□□ -0.63
TMC1-202ENST00000340019 ADGRF5Q8IZF2 1346 aa11.13□□□□□ -0.63
TMC1-202ENST00000340019 PIK3C2GO75747 1445 aa11.13□□□□□ -0.63
TMC1-202ENST00000340019 PTPRMP28827 1452 aa11.13□□□□□ -0.63
TMC1-202ENST00000340019 GPRASP1Q5JY77 1395 aa11.13□□□□□ -0.63
TMC1-202ENST00000340019 ZNF316A6NFI3 1004 aaPredicted RBP11.12□□□□□ -0.63
TMC1-202ENST00000340019 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
TMC1-202ENST00000340019 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
TMC1-202ENST00000340019 ROCK2O75116 1388 aaKnown RBP11.11□□□□□ -0.63
TMC1-202ENST00000340019 VGFO15240 615 aaPredicted RBP11.1□□□□□ -0.63
TMC1-202ENST00000340019 ZNF142P52746 1687 aaPredicted RBP11.1□□□□□ -0.63
TMC1-202ENST00000340019 CEP170BQ9Y4F5 1589 aaPredicted RBP11.1□□□□□ -0.63
TMC1-202ENST00000340019 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
TMC1-202ENST00000340019 PLPPR3Q6T4P5 718 aa11.1□□□□□ -0.63
TMC1-202ENST00000340019 RIMS2Q9UQ26 1411 aa11.1□□□□□ -0.63
TMC1-202ENST00000340019 TMEM2Q9UHN6 1383 aa11.09□□□□□ -0.63
TMC1-202ENST00000340019 EIF4G2P78344 907 aaKnown RBP eCLIP11.09□□□□□ -0.63
TMC1-202ENST00000340019 SETBP1Q9Y6X0 1596 aa11.09□□□□□ -0.63
TMC1-202ENST00000340019 CARD11Q9BXL7 1154 aa11.08□□□□□ -0.64
TMC1-202ENST00000340019 SLIT1O75093 1534 aa11.08□□□□□ -0.64
TMC1-202ENST00000340019 NUTM2DQ5VT03 806 aaPredicted RBP11.08□□□□□ -0.64
TMC1-202ENST00000340019 ARHGAP23Q9P227 1491 aa11.08□□□□□ -0.64
TMC1-202ENST00000340019 IQGAP1P46940 1657 aa11.08□□□□□ -0.64
TMC1-202ENST00000340019 USP47Q96K76 1375 aa11.08□□□□□ -0.64
TMC1-202ENST00000340019 HSPA5P11021 654 aaKnown RBP11.07□□□□□ -0.64
TMC1-202ENST00000340019 C14orf93Q9H972 538 aaKnown RBP11.07□□□□□ -0.64
TMC1-202ENST00000340019 CFAP70Q5T0N1 1121 aa11.07□□□□□ -0.64
TMC1-202ENST00000340019 ADGRB1O14514 1584 aa11.07□□□□□ -0.64
TMC1-202ENST00000340019 KDM4FA0A1W2PPD8 638 aa11.07□□□□□ -0.64
TMC1-202ENST00000340019 NRXN3Q9Y4C0 1643 aa11.06□□□□□ -0.64
TMC1-202ENST00000340019 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.06□□□□□ -0.64
TMC1-202ENST00000340019 HIRIP3Q9BW71 556 aaPredicted RBP11.06□□□□□ -0.64
TMC1-202ENST00000340019 SETD1AO15047 1707 aaKnown RBP11.05□□□□□ -0.64
TMC1-202ENST00000340019 THEMISQ8N1K5 641 aaPredicted RBP11.05□□□□□ -0.64
TMC1-202ENST00000340019 ALKQ9UM73 1620 aa11.04□□□□□ -0.64
TMC1-202ENST00000340019 SCAF11Q99590 1463 aaKnown RBP11.04□□□□□ -0.64
TMC1-202ENST00000340019 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
TMC1-202ENST00000340019 ASXL1Q8IXJ9 1541 aa11.04□□□□□ -0.64
TMC1-202ENST00000340019 POLR1AO95602 1720 aaPredicted RBP11.03□□□□□ -0.64
TMC1-202ENST00000340019 LTKP29376 864 aa11.03□□□□□ -0.64
TMC1-202ENST00000340019 PLEKHG1Q9ULL1 1385 aa11.02□□□□□ -0.65
TMC1-202ENST00000340019 ST20-MTHFSA0A0A6YYL1 179 aa11.01□□□□□ -0.65
TMC1-202ENST00000340019 TXNDC2Q86VQ3 553 aa11□□□□□ -0.65
TMC1-202ENST00000340019 TMEM132EQ6IEE7 984 aa11□□□□□ -0.65
TMC1-202ENST00000340019 EID1Q9Y6B2 187 aa11□□□□□ -0.65
TMC1-202ENST00000340019 ADAMTS13Q76LX8 1427 aa11□□□□□ -0.65
TMC1-202ENST00000340019 MED14O60244 1454 aa11□□□□□ -0.65
TMC1-202ENST00000340019 ARHGEF28Q8N1W1 1705 aaKnown RBP10.99□□□□□ -0.65
TMC1-202ENST00000340019 C11orf95C9JLR9 678 aaPredicted RBP10.99□□□□□ -0.65
TMC1-202ENST00000340019 TESK2Q96S53 571 aa10.99□□□□□ -0.65
TMC1-202ENST00000340019 EIF3AQ14152 1382 aaKnown RBP10.98□□□□□ -0.65
TMC1-202ENST00000340019 WASHC2AQ641Q2 1341 aa10.98□□□□□ -0.65
TMC1-202ENST00000340019 YTHDC2Q9H6S0 1430 aaKnown RBP10.98□□□□□ -0.65
TMC1-202ENST00000340019 DIP2AQ14689 1571 aa10.97□□□□□ -0.65
TMC1-202ENST00000340019 METP08581 1390 aa10.97□□□□□ -0.65
TMC1-202ENST00000340019 CCDC7Q96M83 1385 aa10.97□□□□□ -0.65
TMC1-202ENST00000340019 KNDC1Q76NI1 1749 aa10.96□□□□□ -0.65
TMC1-202ENST00000340019 TRAK1Q9UPV9 953 aa10.96□□□□□ -0.66
TMC1-202ENST00000340019 KIF7Q2M1P5 1343 aa10.96□□□□□ -0.66
TMC1-202ENST00000340019 QRICH2Q9H0J4 1663 aa10.96□□□□□ -0.66
TMC1-202ENST00000340019 ANKLE2Q86XL3 938 aa10.95□□□□□ -0.66
TMC1-202ENST00000340019 DLC1Q96QB1 1528 aa10.95□□□□□ -0.66
TMC1-202ENST00000340019 LRPPRCP42704 1394 aaKnown RBP10.95□□□□□ -0.66
TMC1-202ENST00000340019 SBNO2Q9Y2G9 1366 aa10.95□□□□□ -0.66
TMC1-202ENST00000340019 LMTK3Q96Q04 1460 aa10.95□□□□□ -0.66
TMC1-202ENST00000340019 ABCC11Q96J66 1382 aa10.94□□□□□ -0.66
TMC1-202ENST00000340019 DIEXFQ68CQ4 756 aaKnown RBP10.94□□□□□ -0.66
TMC1-202ENST00000340019 TECPR2O15040 1411 aa10.94□□□□□ -0.66
TMC1-202ENST00000340019 TBX22Q9Y458 520 aa10.94□□□□□ -0.66
TMC1-202ENST00000340019 DISP3Q9P2K9 1392 aa10.93□□□□□ -0.66
TMC1-202ENST00000340019 BCANQ96GW7 911 aa10.93□□□□□ -0.66
TMC1-202ENST00000340019 CENPJQ9HC77 1338 aaPredicted RBP10.93□□□□□ -0.66
TMC1-202ENST00000340019 CPS1P31327 1500 aa10.93□□□□□ -0.66
TMC1-202ENST00000340019 SLC26A8Q96RN1 970 aa10.93□□□□□ -0.66
TMC1-202ENST00000340019 STK26Q9P289 416 aa10.93□□□□□ -0.66
TMC1-202ENST00000340019 PTPRUQ92729 1446 aa10.92□□□□□ -0.66
TMC1-202ENST00000340019 TMF1P82094 1093 aa10.92□□□□□ -0.66
TMC1-202ENST00000340019 DDX10Q13206 875 aaKnown RBP10.92□□□□□ -0.66
TMC1-202ENST00000340019 NPHP4O75161 1426 aaPredicted RBP10.91□□□□□ -0.66
TMC1-202ENST00000340019 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
TMC1-202ENST00000340019 PIK3R4Q99570 1358 aa10.91□□□□□ -0.66
TMC1-202ENST00000340019 XRN1Q8IZH2 1706 aaKnown RBP10.91□□□□□ -0.66
TMC1-202ENST00000340019 SIRT1Q96EB6 747 aa10.9□□□□□ -0.66
TMC1-202ENST00000340019 FAM135BQ49AJ0 1406 aa10.9□□□□□ -0.66
TMC1-202ENST00000340019 CHD2O14647 1828 aaKnown RBP10.9□□□□□ -0.66
TMC1-202ENST00000340019 PRAM1Q96QH2 718 aa10.9□□□□□ -0.67
TMC1-202ENST00000340019 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.67
TMC1-202ENST00000340019 TULP4Q9NRJ4 1543 aa10.89□□□□□ -0.67
TMC1-202ENST00000340019 STRCQ7RTU9 1775 aa10.89□□□□□ -0.67
TMC1-202ENST00000340019 PLEKHH1Q9ULM0 1364 aa10.88□□□□□ -0.67
TMC1-202ENST00000340019 PTCH1Q13635 1447 aa10.88□□□□□ -0.67
TMC1-202ENST00000340019 ROBO2Q9HCK4 1378 aa10.88□□□□□ -0.67
TMC1-202ENST00000340019 HSPA2P54652 639 aa10.88□□□□□ -0.67
TMC1-202ENST00000340019 MYOM1P52179 1685 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms