RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 SLIT1O75093 1534 aa25.78■■□□□ 1.72
SDCBP2-201ENST00000339987 ARHGAP23Q9P227 1491 aa25.78■■□□□ 1.72
SDCBP2-201ENST00000339987 TMEM2Q9UHN6 1383 aa25.78■■□□□ 1.72
SDCBP2-201ENST00000339987 STAC3Q96MF2 364 aa25.78■■□□□ 1.72
SDCBP2-201ENST00000339987 ZFYVE9O95405 1425 aa25.76■■□□□ 1.71
SDCBP2-201ENST00000339987 ZEB1P37275 1124 aaPredicted RBP25.76■■□□□ 1.71
SDCBP2-201ENST00000339987 MYOM2P54296 1465 aa25.75■■□□□ 1.71
SDCBP2-201ENST00000339987 RIMS2Q9UQ26 1411 aa25.75■■□□□ 1.71
SDCBP2-201ENST00000339987 DCAF11Q8TEB1 546 aa25.74■■□□□ 1.71
SDCBP2-201ENST00000339987 LMTK3Q96Q04 1460 aa25.74■■□□□ 1.71
SDCBP2-201ENST00000339987 HDGFP51858 240 aaKnown RBP25.71■■□□□ 1.71
SDCBP2-201ENST00000339987 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.71■■□□□ 1.71
SDCBP2-201ENST00000339987 VGFO15240 615 aaPredicted RBP25.7■■□□□ 1.7
SDCBP2-201ENST00000339987 NRXN1Q9ULB1 1477 aa25.69■■□□□ 1.7
SDCBP2-201ENST00000339987 PPP1R15AO75807 674 aaPredicted RBP25.68■■□□□ 1.7
SDCBP2-201ENST00000339987 KDM2AQ9Y2K7 1162 aa25.68■■□□□ 1.7
SDCBP2-201ENST00000339987 SCAF11Q99590 1463 aaKnown RBP25.66■■□□□ 1.7
SDCBP2-201ENST00000339987 EID1Q9Y6B2 187 aa25.66■■□□□ 1.7
SDCBP2-201ENST00000339987 PRAG1Q86YV5 1406 aa25.66■■□□□ 1.7
SDCBP2-201ENST00000339987 ADGRF5Q8IZF2 1346 aa25.65■■□□□ 1.7
SDCBP2-201ENST00000339987 TXNDC2Q86VQ3 553 aa25.64■■□□□ 1.7
SDCBP2-201ENST00000339987 LTKP29376 864 aa25.63■■□□□ 1.69
SDCBP2-201ENST00000339987 PIK3C2GO75747 1445 aa25.63■■□□□ 1.69
SDCBP2-201ENST00000339987 NUTM2DQ5VT03 806 aaPredicted RBP25.63■■□□□ 1.69
SDCBP2-201ENST00000339987 ANKLE2Q86XL3 938 aa25.63■■□□□ 1.69
SDCBP2-201ENST00000339987 PLEKHG1Q9ULL1 1385 aa25.61■■□□□ 1.69
SDCBP2-201ENST00000339987 POLR1AO95602 1720 aaPredicted RBP25.6■■□□□ 1.69
SDCBP2-201ENST00000339987 SETBP1Q9Y6X0 1596 aa25.59■■□□□ 1.69
SDCBP2-201ENST00000339987 HSPA2P54652 639 aa25.59■■□□□ 1.69
SDCBP2-201ENST00000339987 NBPF8Q3BBV2 869 aa25.59■■□□□ 1.69
SDCBP2-201ENST00000339987 MED14O60244 1454 aa25.57■■□□□ 1.68
SDCBP2-201ENST00000339987 KIAA1210Q9ULL0 1709 aa25.57■■□□□ 1.68
SDCBP2-201ENST00000339987 LAMC1P11047 1609 aa25.56■■□□□ 1.68
SDCBP2-201ENST00000339987 NRXN3Q9Y4C0 1643 aa25.55■■□□□ 1.68
SDCBP2-201ENST00000339987 TRPM1Q7Z4N2 1603 aa25.55■■□□□ 1.68
SDCBP2-201ENST00000339987 RALGAPBQ86X10 1494 aa25.54■■□□□ 1.68
SDCBP2-201ENST00000339987 C14orf93Q9H972 538 aaKnown RBP25.53■■□□□ 1.68
SDCBP2-201ENST00000339987 IQGAP1P46940 1657 aa25.53■■□□□ 1.68
SDCBP2-201ENST00000339987 NPHP4O75161 1426 aaPredicted RBP25.52■■□□□ 1.68
SDCBP2-201ENST00000339987 NCKAP5LQ9HCH0 1330 aa25.52■■□□□ 1.68
SDCBP2-201ENST00000339987 ALKQ9UM73 1620 aa25.52■■□□□ 1.68
SDCBP2-201ENST00000339987 ADAMTS13Q76LX8 1427 aa25.51■■□□□ 1.67
SDCBP2-201ENST00000339987 DIP2AQ14689 1571 aa25.5■■□□□ 1.67
SDCBP2-201ENST00000339987 STRCQ7RTU9 1775 aa25.5■■□□□ 1.67
SDCBP2-201ENST00000339987 SETD1AO15047 1707 aaKnown RBP25.49■■□□□ 1.67
SDCBP2-201ENST00000339987 CFAP70Q5T0N1 1121 aa25.49■■□□□ 1.67
SDCBP2-201ENST00000339987 BCANQ96GW7 911 aa25.47■■□□□ 1.67
SDCBP2-201ENST00000339987 GPRASP1Q5JY77 1395 aa25.47■■□□□ 1.67
SDCBP2-201ENST00000339987 TBX22Q9Y458 520 aa25.46■■□□□ 1.67
SDCBP2-201ENST00000339987 ADGRB1O14514 1584 aa25.45■■□□□ 1.67
SDCBP2-201ENST00000339987 ROCK2O75116 1388 aaKnown RBP25.45■■□□□ 1.66
SDCBP2-201ENST00000339987 NBPF1Q3BBV0 1214 aa25.44■■□□□ 1.66
SDCBP2-201ENST00000339987 SENP3Q9H4L4 574 aaPredicted RBP25.44■■□□□ 1.66
SDCBP2-201ENST00000339987 ASXL1Q8IXJ9 1541 aa25.43■■□□□ 1.66
SDCBP2-201ENST00000339987 SLC26A8Q96RN1 970 aa25.41■■□□□ 1.66
SDCBP2-201ENST00000339987 METP08581 1390 aa25.4■■□□□ 1.66
SDCBP2-201ENST00000339987 PIK3R4Q99570 1358 aa25.4■■□□□ 1.66
SDCBP2-201ENST00000339987 CARD11Q9BXL7 1154 aa25.37■■□□□ 1.65
SDCBP2-201ENST00000339987 TMEM132EQ6IEE7 984 aa25.37■■□□□ 1.65
SDCBP2-201ENST00000339987 DMRT2Q9Y5R5 561 aa25.37■■□□□ 1.65
SDCBP2-201ENST00000339987 LRPPRCP42704 1394 aaKnown RBP25.35■■□□□ 1.65
SDCBP2-201ENST00000339987 YTHDC2Q9H6S0 1430 aaKnown RBP25.35■■□□□ 1.65
SDCBP2-201ENST00000339987 ABCC11Q96J66 1382 aa25.32■■□□□ 1.64
SDCBP2-201ENST00000339987 PTPRUQ92729 1446 aa25.31■■□□□ 1.64
SDCBP2-201ENST00000339987 KNDC1Q76NI1 1749 aa25.31■■□□□ 1.64
SDCBP2-201ENST00000339987 TECPR2O15040 1411 aa25.31■■□□□ 1.64
SDCBP2-201ENST00000339987 CHD2O14647 1828 aaKnown RBP25.3■■□□□ 1.64
SDCBP2-201ENST00000339987 XRN1Q8IZH2 1706 aaKnown RBP25.3■■□□□ 1.64
SDCBP2-201ENST00000339987 DLC1Q96QB1 1528 aa25.3■■□□□ 1.64
SDCBP2-201ENST00000339987 NWD1Q149M9 1564 aa25.29■■□□□ 1.64
SDCBP2-201ENST00000339987 USP47Q96K76 1375 aa25.28■■□□□ 1.64
SDCBP2-201ENST00000339987 CPS1P31327 1500 aa25.28■■□□□ 1.64
SDCBP2-201ENST00000339987 EIF3AQ14152 1382 aaKnown RBP25.26■■□□□ 1.63
SDCBP2-201ENST00000339987 ARHGEF28Q8N1W1 1705 aaKnown RBP25.26■■□□□ 1.63
SDCBP2-201ENST00000339987 KCNA6P17658 529 aa25.26■■□□□ 1.63
SDCBP2-201ENST00000339987 STK26Q9P289 416 aa25.26■■□□□ 1.63
SDCBP2-201ENST00000339987 TRAK1Q9UPV9 953 aa25.26■■□□□ 1.63
SDCBP2-201ENST00000339987 AMOTL2Q9Y2J4 779 aa25.26■■□□□ 1.63
SDCBP2-201ENST00000339987 EIF4G2P78344 907 aaKnown RBP eCLIP25.25■■□□□ 1.63
SDCBP2-201ENST00000339987 PTCH1Q13635 1447 aa25.25■■□□□ 1.63
SDCBP2-201ENST00000339987 SIRT1Q96EB6 747 aa25.25■■□□□ 1.63
SDCBP2-201ENST00000339987 FAM135BQ49AJ0 1406 aa25.23■■□□□ 1.63
SDCBP2-201ENST00000339987 FBXO41Q8TF61 875 aa25.21■■□□□ 1.63
SDCBP2-201ENST00000339987 NKTRP30414 1462 aaKnown RBP25.21■■□□□ 1.63
SDCBP2-201ENST00000339987 ROBO2Q9HCK4 1378 aa25.2■■□□□ 1.62
SDCBP2-201ENST00000339987 HSPA5P11021 654 aaKnown RBP25.2■■□□□ 1.62
SDCBP2-201ENST00000339987 STRCP1A6NGW2 1772 aa25.18■■□□□ 1.62
SDCBP2-201ENST00000339987 CENPJQ9HC77 1338 aaPredicted RBP25.17■■□□□ 1.62
SDCBP2-201ENST00000339987 ST20-MTHFSA0A0A6YYL1 179 aa25.17■■□□□ 1.62
SDCBP2-201ENST00000339987 PRAM1Q96QH2 718 aa25.16■■□□□ 1.62
SDCBP2-201ENST00000339987 SBNO2Q9Y2G9 1366 aa25.16■■□□□ 1.62
SDCBP2-201ENST00000339987 POGKQ9P215 609 aa25.15■■□□□ 1.62
SDCBP2-201ENST00000339987 QRICH2Q9H0J4 1663 aa25.15■■□□□ 1.62
SDCBP2-201ENST00000339987 ZNF335Q9H4Z2 1342 aaPredicted RBP25.14■■□□□ 1.62
SDCBP2-201ENST00000339987 PLEKHH1Q9ULM0 1364 aa25.14■■□□□ 1.61
SDCBP2-201ENST00000339987 WAPLQ7Z5K2 1190 aa25.12■■□□□ 1.61
SDCBP2-201ENST00000339987 TESK2Q96S53 571 aa25.11■■□□□ 1.61
SDCBP2-201ENST00000339987 SLC24A1O60721 1099 aa25.1■■□□□ 1.61
SDCBP2-201ENST00000339987 NCOA3Q9Y6Q9 1424 aa25.08■■□□□ 1.61
SDCBP2-201ENST00000339987 PROSER2Q86WR7 435 aaPredicted RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms