RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ROCK2O75116 1388 aaKnown RBP22.23■■□□□ 1.15
LITAF-201ENST00000339430 FBXO31Q5XUX0 539 aaPredicted RBP22.22■■□□□ 1.15
LITAF-201ENST00000339430 SYNMO15061 1565 aa22.21■■□□□ 1.15
LITAF-201ENST00000339430 KIF1BO60333 1816 aa22.2■■□□□ 1.14
LITAF-201ENST00000339430 PREX1Q8TCU6 1659 aa22.2■■□□□ 1.14
LITAF-201ENST00000339430 CHGAP10645 457 aaKnown RBP22.19■■□□□ 1.14
LITAF-201ENST00000339430 SENP3-EIF4A1A0A087X0R7 540 aa22.19■■□□□ 1.14
LITAF-201ENST00000339430 TRPM1Q7Z4N2 1603 aa22.17■■□□□ 1.14
LITAF-201ENST00000339430 PRAG1Q86YV5 1406 aa22.16■■□□□ 1.14
LITAF-201ENST00000339430 ZMYM3Q14202 1370 aa22.16■■□□□ 1.14
LITAF-201ENST00000339430 ERVK-7P63135 1459 aa22.16■■□□□ 1.14
LITAF-201ENST00000339430 MROH2AA6NES4 1674 aa22.16■■□□□ 1.14
LITAF-201ENST00000339430 PIK3C2BO00750 1634 aa22.16■■□□□ 1.14
LITAF-201ENST00000339430 NBPF1Q3BBV0 1214 aa22.16■■□□□ 1.14
LITAF-201ENST00000339430 NEURL4Q96JN8 1562 aa22.16■■□□□ 1.14
LITAF-201ENST00000339430 IDI1Q13907 227 aa22.15■■□□□ 1.14
LITAF-201ENST00000339430 ADGRB3O60242 1522 aa22.14■■□□□ 1.13
LITAF-201ENST00000339430 SLC52A1Q9NWF4 448 aa22.13■■□□□ 1.13
LITAF-201ENST00000339430 TMC1Q8TDI8 760 aa22.12■■□□□ 1.13
LITAF-201ENST00000339430 RBM19Q9Y4C8 960 aaKnown RBP22.12■■□□□ 1.13
LITAF-201ENST00000339430 SPATA31D1Q6ZQQ2 1576 aa22.09■■□□□ 1.13
LITAF-201ENST00000339430 STAC3Q96MF2 364 aa22.09■■□□□ 1.13
LITAF-201ENST00000339430 PNISRQ8TF01 805 aaKnown RBP22.08■■□□□ 1.13
LITAF-201ENST00000339430 MADDQ8WXG6 1647 aa22.07■■□□□ 1.12
LITAF-201ENST00000339430 PPP4R2Q9NY27 417 aa22.06■■□□□ 1.12
LITAF-201ENST00000339430 IFT172Q9UG01 1749 aa22.05■■□□□ 1.12
LITAF-201ENST00000339430 FER1L4A9Z1Z3 1794 aa22.05■■□□□ 1.12
LITAF-201ENST00000339430 CEBPAP49715 358 aaPredicted RBP22.04■■□□□ 1.12
LITAF-201ENST00000339430 ERICH6BQ5W0A0 696 aa22.04■■□□□ 1.12
LITAF-201ENST00000339430 ADGRF5Q8IZF2 1346 aa22.04■■□□□ 1.12
LITAF-201ENST00000339430 MYOM2P54296 1465 aa22.03■■□□□ 1.12
LITAF-201ENST00000339430 TMEM131LA2VDJ0 1609 aa22.03■■□□□ 1.12
LITAF-201ENST00000339430 RPGRIP1LQ68CZ1 1315 aa22.03■■□□□ 1.12
LITAF-201ENST00000339430 MYBBP1AQ9BQG0 1328 aaKnown RBP22.03■■□□□ 1.12
LITAF-201ENST00000339430 MYT1Q01538 1121 aa22.03■■□□□ 1.12
LITAF-201ENST00000339430 SMG6Q86US8 1419 aaKnown RBP22.02■■□□□ 1.12
LITAF-201ENST00000339430 B4GALNT3Q6L9W6 998 aa22.02■■□□□ 1.12
LITAF-201ENST00000339430 PLPPR3Q6T4P5 718 aa22.02■■□□□ 1.12
LITAF-201ENST00000339430 STAG3Q9UJ98 1225 aa22.02■■□□□ 1.12
LITAF-201ENST00000339430 MYO5BQ9ULV0 1848 aa22.02■■□□□ 1.12
LITAF-201ENST00000339430 PPLO60437 1756 aa22.02■■□□□ 1.12
LITAF-201ENST00000339430 NUTM2DQ5VT03 806 aaPredicted RBP22.01■■□□□ 1.11
LITAF-201ENST00000339430 GPRASP1Q5JY77 1395 aa22.01■■□□□ 1.11
LITAF-201ENST00000339430 RALBP1Q15311 655 aa22.01■■□□□ 1.11
LITAF-201ENST00000339430 NUDCQ9Y266 331 aa22■■□□□ 1.11
LITAF-201ENST00000339430 TNRQ92752 1358 aa21.99■■□□□ 1.11
LITAF-201ENST00000339430 DISP3Q9P2K9 1392 aa21.99■■□□□ 1.11
LITAF-201ENST00000339430 C3P01024 1663 aa21.98■■□□□ 1.11
LITAF-201ENST00000339430 BRD4O60885 1362 aaPredicted RBP21.98■■□□□ 1.11
LITAF-201ENST00000339430 NEXMIFQ5QGS0 1516 aa21.98■■□□□ 1.11
LITAF-201ENST00000339430 LAMC1P11047 1609 aa21.97■■□□□ 1.11
LITAF-201ENST00000339430 TESK2Q96S53 571 aa21.97■■□□□ 1.11
LITAF-201ENST00000339430 NRXN1Q9ULB1 1477 aa21.97■■□□□ 1.11
LITAF-201ENST00000339430 CFAP70Q5T0N1 1121 aa21.96■■□□□ 1.11
LITAF-201ENST00000339430 KTN1Q86UP2 1357 aaKnown RBP21.96■■□□□ 1.11
LITAF-201ENST00000339430 VGFO15240 615 aaPredicted RBP21.95■■□□□ 1.1
LITAF-201ENST00000339430 LRPPRCP42704 1394 aaKnown RBP21.95■■□□□ 1.1
LITAF-201ENST00000339430 A2ML1A8K2U0 1454 aa21.94■■□□□ 1.1
LITAF-201ENST00000339430 PIK3C2GO75747 1445 aa21.93■■□□□ 1.1
LITAF-201ENST00000339430 PER1O15534 1290 aaPredicted RBP21.93■■□□□ 1.1
LITAF-201ENST00000339430 CC2D1BQ5T0F9 858 aaKnown RBP21.92■■□□□ 1.1
LITAF-201ENST00000339430 RIMS1Q86UR5 1692 aaKnown RBP21.92■■□□□ 1.1
LITAF-201ENST00000339430 KIAA1210Q9ULL0 1709 aa21.92■■□□□ 1.1
LITAF-201ENST00000339430 PARD3Q8TEW0 1356 aa21.92■■□□□ 1.1
LITAF-201ENST00000339430 SALL2Q9Y467 1007 aaPredicted RBP21.91■■□□□ 1.1
LITAF-201ENST00000339430 SENP3Q9H4L4 574 aaPredicted RBP21.91■■□□□ 1.1
LITAF-201ENST00000339430 ADAMTSL3P82987 1691 aa21.9■■□□□ 1.1
LITAF-201ENST00000339430 NLRP13Q86W25 1043 aa21.9■■□□□ 1.1
LITAF-201ENST00000339430 PANK3Q9H999 370 aa21.9■■□□□ 1.1
LITAF-201ENST00000339430 TMF1P82094 1093 aa21.9■■□□□ 1.1
LITAF-201ENST00000339430 ZFYVE9O95405 1425 aa21.88■■□□□ 1.09
LITAF-201ENST00000339430 ANP32EQ9BTT0 268 aa21.88■■□□□ 1.09
LITAF-201ENST00000339430 C14orf93Q9H972 538 aaKnown RBP21.88■■□□□ 1.09
LITAF-201ENST00000339430 NLRP1Q9C000 1473 aa21.87■■□□□ 1.09
LITAF-201ENST00000339430 RIMS2Q9UQ26 1411 aa21.86■■□□□ 1.09
LITAF-201ENST00000339430 UBR1Q8IWV7 1749 aa21.85■■□□□ 1.09
LITAF-201ENST00000339430 SCAF11Q99590 1463 aaKnown RBP21.85■■□□□ 1.09
LITAF-201ENST00000339430 RNF123Q5XPI4 1314 aa21.85■■□□□ 1.09
LITAF-201ENST00000339430 IQGAP1P46940 1657 aa21.85■■□□□ 1.09
LITAF-201ENST00000339430 TMEM132EQ6IEE7 984 aa21.83■■□□□ 1.09
LITAF-201ENST00000339430 KDM5AP29375 1690 aaKnown RBP21.83■■□□□ 1.08
LITAF-201ENST00000339430 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
LITAF-201ENST00000339430 ADGRB1O14514 1584 aa21.8■■□□□ 1.08
LITAF-201ENST00000339430 TMEM2Q9UHN6 1383 aa21.8■■□□□ 1.08
LITAF-201ENST00000339430 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.79■■□□□ 1.08
LITAF-201ENST00000339430 MYO3AQ8NEV4 1616 aa21.79■■□□□ 1.08
LITAF-201ENST00000339430 CCDC136Q96JN2 1154 aa21.78■■□□□ 1.08
LITAF-201ENST00000339430 MSH5O43196 834 aa21.77■■□□□ 1.08
LITAF-201ENST00000339430 HDGFP51858 240 aaKnown RBP21.77■■□□□ 1.08
LITAF-201ENST00000339430 EIF3AQ14152 1382 aaKnown RBP21.77■■□□□ 1.08
LITAF-201ENST00000339430 TRAK1Q9UPV9 953 aa21.76■■□□□ 1.07
LITAF-201ENST00000339430 ALKQ9UM73 1620 aa21.74■■□□□ 1.07
LITAF-201ENST00000339430 PTPRMP28827 1452 aa21.73■■□□□ 1.07
LITAF-201ENST00000339430 THEMISQ8N1K5 641 aaPredicted RBP21.73■■□□□ 1.07
LITAF-201ENST00000339430 CDCA7LQ96GN5 454 aa21.73■■□□□ 1.07
LITAF-201ENST00000339430 LTKP29376 864 aa21.73■■□□□ 1.07
LITAF-201ENST00000339430 ASXL1Q8IXJ9 1541 aa21.72■■□□□ 1.07
LITAF-201ENST00000339430 FANCIQ9NVI1 1328 aa21.72■■□□□ 1.07
LITAF-201ENST00000339430 CEP170BQ9Y4F5 1589 aaPredicted RBP21.72■■□□□ 1.07
LITAF-201ENST00000339430 TXNDC2Q86VQ3 553 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms