RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 CEP170BQ9Y4F5 1589 aaPredicted RBP20.76■□□□□ 0.91
NIPAL3-202ENST00000339255 KIAA1210Q9ULL0 1709 aa20.74■□□□□ 0.91
NIPAL3-202ENST00000339255 TRPM1Q7Z4N2 1603 aa20.74■□□□□ 0.91
NIPAL3-202ENST00000339255 NRXN1Q9ULB1 1477 aa20.74■□□□□ 0.91
NIPAL3-202ENST00000339255 ZFYVE9O95405 1425 aa20.74■□□□□ 0.91
NIPAL3-202ENST00000339255 KDM2AQ9Y2K7 1162 aa20.73■□□□□ 0.91
NIPAL3-202ENST00000339255 RALGAPBQ86X10 1494 aa20.73■□□□□ 0.91
NIPAL3-202ENST00000339255 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
NIPAL3-202ENST00000339255 VGFO15240 615 aaPredicted RBP20.7■□□□□ 0.91
NIPAL3-202ENST00000339255 LAMC1P11047 1609 aa20.7■□□□□ 0.9
NIPAL3-202ENST00000339255 NBPF8Q3BBV2 869 aa20.7■□□□□ 0.9
NIPAL3-202ENST00000339255 SLIT1O75093 1534 aa20.68■□□□□ 0.9
NIPAL3-202ENST00000339255 PIK3C2GO75747 1445 aa20.68■□□□□ 0.9
NIPAL3-202ENST00000339255 RIMS2Q9UQ26 1411 aa20.68■□□□□ 0.9
NIPAL3-202ENST00000339255 KDM4FA0A1W2PPD8 638 aa20.67■□□□□ 0.9
NIPAL3-202ENST00000339255 HDGFP51858 240 aaKnown RBP20.67■□□□□ 0.9
NIPAL3-202ENST00000339255 TMEM2Q9UHN6 1383 aa20.67■□□□□ 0.9
NIPAL3-202ENST00000339255 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.67■□□□□ 0.9
NIPAL3-202ENST00000339255 ARHGAP23Q9P227 1491 aa20.66■□□□□ 0.9
NIPAL3-202ENST00000339255 THEMISQ8N1K5 641 aaPredicted RBP20.66■□□□□ 0.9
NIPAL3-202ENST00000339255 ADGRF5Q8IZF2 1346 aa20.63■□□□□ 0.89
NIPAL3-202ENST00000339255 ROCK2O75116 1388 aaKnown RBP20.62■□□□□ 0.89
NIPAL3-202ENST00000339255 GPRASP1Q5JY77 1395 aa20.62■□□□□ 0.89
NIPAL3-202ENST00000339255 SETBP1Q9Y6X0 1596 aa20.62■□□□□ 0.89
NIPAL3-202ENST00000339255 EID1Q9Y6B2 187 aa20.58■□□□□ 0.89
NIPAL3-202ENST00000339255 SCAF11Q99590 1463 aaKnown RBP20.58■□□□□ 0.88
NIPAL3-202ENST00000339255 POLR1AO95602 1720 aaPredicted RBP20.56■□□□□ 0.88
NIPAL3-202ENST00000339255 IQGAP1P46940 1657 aa20.56■□□□□ 0.88
NIPAL3-202ENST00000339255 C14orf93Q9H972 538 aaKnown RBP20.56■□□□□ 0.88
NIPAL3-202ENST00000339255 NRXN3Q9Y4C0 1643 aa20.56■□□□□ 0.88
NIPAL3-202ENST00000339255 PLEKHG1Q9ULL1 1385 aa20.55■□□□□ 0.88
NIPAL3-202ENST00000339255 SETD1AO15047 1707 aaKnown RBP20.55■□□□□ 0.88
NIPAL3-202ENST00000339255 NUTM2DQ5VT03 806 aaPredicted RBP20.55■□□□□ 0.88
NIPAL3-202ENST00000339255 CARD11Q9BXL7 1154 aa20.55■□□□□ 0.88
NIPAL3-202ENST00000339255 ALKQ9UM73 1620 aa20.55■□□□□ 0.88
NIPAL3-202ENST00000339255 ADGRB1O14514 1584 aa20.54■□□□□ 0.88
NIPAL3-202ENST00000339255 EIF4G2P78344 907 aaKnown RBP eCLIP20.54■□□□□ 0.88
NIPAL3-202ENST00000339255 TXNDC2Q86VQ3 553 aa20.53■□□□□ 0.88
NIPAL3-202ENST00000339255 DIP2AQ14689 1571 aa20.53■□□□□ 0.88
NIPAL3-202ENST00000339255 USP47Q96K76 1375 aa20.53■□□□□ 0.88
NIPAL3-202ENST00000339255 NBPF1Q3BBV0 1214 aa20.52■□□□□ 0.88
NIPAL3-202ENST00000339255 CFAP70Q5T0N1 1121 aa20.52■□□□□ 0.88
NIPAL3-202ENST00000339255 LTKP29376 864 aa20.51■□□□□ 0.87
NIPAL3-202ENST00000339255 ANKLE2Q86XL3 938 aa20.5■□□□□ 0.87
NIPAL3-202ENST00000339255 EIF3AQ14152 1382 aaKnown RBP20.49■□□□□ 0.87
NIPAL3-202ENST00000339255 LMTK3Q96Q04 1460 aa20.49■□□□□ 0.87
NIPAL3-202ENST00000339255 ASXL1Q8IXJ9 1541 aa20.48■□□□□ 0.87
NIPAL3-202ENST00000339255 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
NIPAL3-202ENST00000339255 MED14O60244 1454 aa20.46■□□□□ 0.87
NIPAL3-202ENST00000339255 HSPA5P11021 654 aaKnown RBP20.45■□□□□ 0.86
NIPAL3-202ENST00000339255 ADAMTS13Q76LX8 1427 aa20.45■□□□□ 0.86
NIPAL3-202ENST00000339255 ARHGEF28Q8N1W1 1705 aaKnown RBP20.45■□□□□ 0.86
NIPAL3-202ENST00000339255 KNDC1Q76NI1 1749 aa20.43■□□□□ 0.86
NIPAL3-202ENST00000339255 BCANQ96GW7 911 aa20.43■□□□□ 0.86
NIPAL3-202ENST00000339255 YTHDC2Q9H6S0 1430 aaKnown RBP20.43■□□□□ 0.86
NIPAL3-202ENST00000339255 NPHP4O75161 1426 aaPredicted RBP20.4■□□□□ 0.86
NIPAL3-202ENST00000339255 DLC1Q96QB1 1528 aa20.4■□□□□ 0.86
NIPAL3-202ENST00000339255 TBX22Q9Y458 520 aa20.4■□□□□ 0.86
NIPAL3-202ENST00000339255 TMEM132EQ6IEE7 984 aa20.39■□□□□ 0.86
NIPAL3-202ENST00000339255 LRPPRCP42704 1394 aaKnown RBP20.39■□□□□ 0.85
NIPAL3-202ENST00000339255 PIK3R4Q99570 1358 aa20.39■□□□□ 0.85
NIPAL3-202ENST00000339255 QRICH2Q9H0J4 1663 aa20.38■□□□□ 0.85
NIPAL3-202ENST00000339255 TECPR2O15040 1411 aa20.38■□□□□ 0.85
NIPAL3-202ENST00000339255 METP08581 1390 aa20.38■□□□□ 0.85
NIPAL3-202ENST00000339255 CPS1P31327 1500 aa20.37■□□□□ 0.85
NIPAL3-202ENST00000339255 ABCC11Q96J66 1382 aa20.37■□□□□ 0.85
NIPAL3-202ENST00000339255 ST20-MTHFSA0A0A6YYL1 179 aa20.37■□□□□ 0.85
NIPAL3-202ENST00000339255 SLC24A1O60721 1099 aa20.37■□□□□ 0.85
NIPAL3-202ENST00000339255 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
NIPAL3-202ENST00000339255 SBNO2Q9Y2G9 1366 aa20.36■□□□□ 0.85
NIPAL3-202ENST00000339255 XRN1Q8IZH2 1706 aaKnown RBP20.35■□□□□ 0.85
NIPAL3-202ENST00000339255 HIRIP3Q9BW71 556 aaPredicted RBP20.35■□□□□ 0.85
NIPAL3-202ENST00000339255 STRCQ7RTU9 1775 aa20.35■□□□□ 0.85
NIPAL3-202ENST00000339255 CHD2O14647 1828 aaKnown RBP20.34■□□□□ 0.85
NIPAL3-202ENST00000339255 SLC26A8Q96RN1 970 aa20.34■□□□□ 0.85
NIPAL3-202ENST00000339255 TRAK1Q9UPV9 953 aa20.34■□□□□ 0.85
NIPAL3-202ENST00000339255 CENPJQ9HC77 1338 aaPredicted RBP20.33■□□□□ 0.85
NIPAL3-202ENST00000339255 FAM135BQ49AJ0 1406 aa20.32■□□□□ 0.84
NIPAL3-202ENST00000339255 NCKAP5LQ9HCH0 1330 aa20.32■□□□□ 0.84
NIPAL3-202ENST00000339255 HSPA2P54652 639 aa20.32■□□□□ 0.84
NIPAL3-202ENST00000339255 TESK2Q96S53 571 aa20.32■□□□□ 0.84
NIPAL3-202ENST00000339255 STK26Q9P289 416 aa20.31■□□□□ 0.84
NIPAL3-202ENST00000339255 PTCH1Q13635 1447 aa20.3■□□□□ 0.84
NIPAL3-202ENST00000339255 SIRT1Q96EB6 747 aa20.3■□□□□ 0.84
NIPAL3-202ENST00000339255 NWD1Q149M9 1564 aa20.28■□□□□ 0.84
NIPAL3-202ENST00000339255 TMF1P82094 1093 aa20.28■□□□□ 0.84
NIPAL3-202ENST00000339255 PTPRUQ92729 1446 aa20.28■□□□□ 0.84
NIPAL3-202ENST00000339255 CCDC7Q96M83 1385 aa20.26■□□□□ 0.83
NIPAL3-202ENST00000339255 CDCA8Q53HL2 280 aa20.26■□□□□ 0.83
NIPAL3-202ENST00000339255 PRAM1Q96QH2 718 aa20.26■□□□□ 0.83
NIPAL3-202ENST00000339255 POGKQ9P215 609 aa20.26■□□□□ 0.83
NIPAL3-202ENST00000339255 AMOTL2Q9Y2J4 779 aa20.25■□□□□ 0.83
NIPAL3-202ENST00000339255 WASHC2AQ641Q2 1341 aa20.25■□□□□ 0.83
NIPAL3-202ENST00000339255 KIF7Q2M1P5 1343 aa20.24■□□□□ 0.83
NIPAL3-202ENST00000339255 ROBO2Q9HCK4 1378 aa20.24■□□□□ 0.83
NIPAL3-202ENST00000339255 DISP3Q9P2K9 1392 aa20.23■□□□□ 0.83
NIPAL3-202ENST00000339255 NKTRP30414 1462 aaKnown RBP20.23■□□□□ 0.83
NIPAL3-202ENST00000339255 ADGRB2O60241 1585 aa20.22■□□□□ 0.83
NIPAL3-202ENST00000339255 C11orf95C9JLR9 678 aaPredicted RBP20.21■□□□□ 0.83
NIPAL3-202ENST00000339255 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms