RNA–Protein interactions for RNA: ENST00000339098.9

CERKL-201, Transcript of ceramide kinase like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CERKL, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERKL-201ENST00000339098 TIMELESSQ9UNS1 1208 aa29.32■■■□□ 2.28
CERKL-201ENST00000339098 ARHGAP23Q9P227 1491 aa29.32■■■□□ 2.28
CERKL-201ENST00000339098 ZFYVE9O95405 1425 aa29.31■■■□□ 2.28
CERKL-201ENST00000339098 RIMS2Q9UQ26 1411 aa29.3■■■□□ 2.28
CERKL-201ENST00000339098 DCAF11Q8TEB1 546 aa29.3■■■□□ 2.28
CERKL-201ENST00000339098 HDGFP51858 240 aaKnown RBP29.25■■■□□ 2.27
CERKL-201ENST00000339098 HSPA2P54652 639 aa29.25■■■□□ 2.27
CERKL-201ENST00000339098 NUTM2DQ5VT03 806 aaPredicted RBP29.25■■■□□ 2.27
CERKL-201ENST00000339098 STAC3Q96MF2 364 aa29.25■■■□□ 2.27
CERKL-201ENST00000339098 LTKP29376 864 aa29.24■■■□□ 2.27
CERKL-201ENST00000339098 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.24■■■□□ 2.27
CERKL-201ENST00000339098 KDM2AQ9Y2K7 1162 aa29.24■■■□□ 2.27
CERKL-201ENST00000339098 VGFO15240 615 aaPredicted RBP29.23■■■□□ 2.27
CERKL-201ENST00000339098 AEBP2Q6ZN18 517 aaPredicted RBP29.23■■■□□ 2.27
CERKL-201ENST00000339098 MYOM2P54296 1465 aa29.23■■■□□ 2.27
CERKL-201ENST00000339098 TXNDC2Q86VQ3 553 aa29.22■■■□□ 2.27
CERKL-201ENST00000339098 EID1Q9Y6B2 187 aa29.22■■■□□ 2.27
CERKL-201ENST00000339098 SCAF11Q99590 1463 aaKnown RBP29.2■■■□□ 2.27
CERKL-201ENST00000339098 ANKLE2Q86XL3 938 aa29.2■■■□□ 2.26
CERKL-201ENST00000339098 ADGRF5Q8IZF2 1346 aa29.2■■■□□ 2.26
CERKL-201ENST00000339098 POLR1AO95602 1720 aaPredicted RBP29.18■■■□□ 2.26
CERKL-201ENST00000339098 NRXN1Q9ULB1 1477 aa29.18■■■□□ 2.26
CERKL-201ENST00000339098 PPP1R15AO75807 674 aaPredicted RBP29.18■■■□□ 2.26
CERKL-201ENST00000339098 PRAG1Q86YV5 1406 aa29.14■■■□□ 2.25
CERKL-201ENST00000339098 PLEKHG1Q9ULL1 1385 aa29.13■■■□□ 2.25
CERKL-201ENST00000339098 PIK3C2GO75747 1445 aa29.13■■■□□ 2.25
CERKL-201ENST00000339098 STRCQ7RTU9 1775 aa29.13■■■□□ 2.25
CERKL-201ENST00000339098 NCKAP5LQ9HCH0 1330 aa29.12■■■□□ 2.25
CERKL-201ENST00000339098 MED14O60244 1454 aa29.11■■■□□ 2.25
CERKL-201ENST00000339098 NBPF8Q3BBV2 869 aa29.1■■■□□ 2.25
CERKL-201ENST00000339098 ZEB1P37275 1124 aaPredicted RBP29.09■■■□□ 2.25
CERKL-201ENST00000339098 NRXN3Q9Y4C0 1643 aa29.09■■■□□ 2.25
CERKL-201ENST00000339098 SETBP1Q9Y6X0 1596 aa29.09■■■□□ 2.25
CERKL-201ENST00000339098 SENP3Q9H4L4 574 aaPredicted RBP29.09■■■□□ 2.25
CERKL-201ENST00000339098 IQGAP1P46940 1657 aa29.08■■■□□ 2.24
CERKL-201ENST00000339098 NPHP4O75161 1426 aaPredicted RBP29.05■■■□□ 2.24
CERKL-201ENST00000339098 BCANQ96GW7 911 aa29.04■■■□□ 2.24
CERKL-201ENST00000339098 ADAMTS13Q76LX8 1427 aa29.03■■■□□ 2.24
CERKL-201ENST00000339098 ALKQ9UM73 1620 aa29.03■■■□□ 2.24
CERKL-201ENST00000339098 C14orf93Q9H972 538 aaKnown RBP29.03■■■□□ 2.24
CERKL-201ENST00000339098 KIAA1210Q9ULL0 1709 aa29.03■■■□□ 2.24
CERKL-201ENST00000339098 TRPM1Q7Z4N2 1603 aa29.03■■■□□ 2.24
CERKL-201ENST00000339098 LAMC1P11047 1609 aa29.02■■■□□ 2.24
CERKL-201ENST00000339098 SETD1AO15047 1707 aaKnown RBP29.02■■■□□ 2.24
CERKL-201ENST00000339098 CFAP70Q5T0N1 1121 aa29.02■■■□□ 2.24
CERKL-201ENST00000339098 SLC26A8Q96RN1 970 aa28.99■■■□□ 2.23
CERKL-201ENST00000339098 DIP2AQ14689 1571 aa28.97■■■□□ 2.23
CERKL-201ENST00000339098 TBX22Q9Y458 520 aa28.97■■■□□ 2.23
CERKL-201ENST00000339098 RALGAPBQ86X10 1494 aa28.96■■■□□ 2.23
CERKL-201ENST00000339098 NBPF1Q3BBV0 1214 aa28.96■■■□□ 2.23
CERKL-201ENST00000339098 ADGRB1O14514 1584 aa28.93■■■□□ 2.22
CERKL-201ENST00000339098 METP08581 1390 aa28.93■■■□□ 2.22
CERKL-201ENST00000339098 ASXL1Q8IXJ9 1541 aa28.92■■■□□ 2.22
CERKL-201ENST00000339098 ROCK2O75116 1388 aaKnown RBP28.91■■■□□ 2.22
CERKL-201ENST00000339098 TMEM132EQ6IEE7 984 aa28.91■■■□□ 2.22
CERKL-201ENST00000339098 DMRT2Q9Y5R5 561 aa28.9■■■□□ 2.22
CERKL-201ENST00000339098 GPRASP1Q5JY77 1395 aa28.9■■■□□ 2.22
CERKL-201ENST00000339098 PIK3R4Q99570 1358 aa28.86■■■□□ 2.21
CERKL-201ENST00000339098 CHD2O14647 1828 aaKnown RBP28.86■■■□□ 2.21
CERKL-201ENST00000339098 CARD11Q9BXL7 1154 aa28.83■■■□□ 2.21
CERKL-201ENST00000339098 PTPRUQ92729 1446 aa28.83■■■□□ 2.21
CERKL-201ENST00000339098 YTHDC2Q9H6S0 1430 aaKnown RBP28.83■■■□□ 2.21
CERKL-201ENST00000339098 LRPPRCP42704 1394 aaKnown RBP28.81■■■□□ 2.2
CERKL-201ENST00000339098 ABCC11Q96J66 1382 aa28.78■■■□□ 2.2
CERKL-201ENST00000339098 XRN1Q8IZH2 1706 aaKnown RBP28.78■■■□□ 2.2
CERKL-201ENST00000339098 STK26Q9P289 416 aa28.78■■■□□ 2.2
CERKL-201ENST00000339098 AMOTL2Q9Y2J4 779 aa28.78■■■□□ 2.2
CERKL-201ENST00000339098 KNDC1Q76NI1 1749 aa28.77■■■□□ 2.2
CERKL-201ENST00000339098 TECPR2O15040 1411 aa28.76■■■□□ 2.19
CERKL-201ENST00000339098 NWD1Q149M9 1564 aa28.76■■■□□ 2.19
CERKL-201ENST00000339098 KCNA6P17658 529 aa28.76■■■□□ 2.19
CERKL-201ENST00000339098 STRCP1A6NGW2 1772 aa28.75■■■□□ 2.19
CERKL-201ENST00000339098 TRAK1Q9UPV9 953 aa28.75■■■□□ 2.19
CERKL-201ENST00000339098 ARHGEF28Q8N1W1 1705 aaKnown RBP28.74■■■□□ 2.19
CERKL-201ENST00000339098 CPS1P31327 1500 aa28.72■■■□□ 2.19
CERKL-201ENST00000339098 DLC1Q96QB1 1528 aa28.72■■■□□ 2.19
CERKL-201ENST00000339098 USP47Q96K76 1375 aa28.71■■■□□ 2.19
CERKL-201ENST00000339098 ZNF335Q9H4Z2 1342 aaPredicted RBP28.71■■■□□ 2.19
CERKL-201ENST00000339098 ROBO2Q9HCK4 1378 aa28.69■■■□□ 2.18
CERKL-201ENST00000339098 PTCH1Q13635 1447 aa28.69■■■□□ 2.18
CERKL-201ENST00000339098 SIRT1Q96EB6 747 aa28.68■■■□□ 2.18
CERKL-201ENST00000339098 NKTRP30414 1462 aaKnown RBP28.67■■■□□ 2.18
CERKL-201ENST00000339098 FAM135BQ49AJ0 1406 aa28.67■■■□□ 2.18
CERKL-201ENST00000339098 EIF3AQ14152 1382 aaKnown RBP28.66■■■□□ 2.18
CERKL-201ENST00000339098 EIF4G2P78344 907 aaKnown RBP eCLIP28.66■■■□□ 2.18
CERKL-201ENST00000339098 WAPLQ7Z5K2 1190 aa28.64■■■□□ 2.18
CERKL-201ENST00000339098 PRAM1Q96QH2 718 aa28.64■■■□□ 2.18
CERKL-201ENST00000339098 PLEKHH1Q9ULM0 1364 aa28.63■■■□□ 2.17
CERKL-201ENST00000339098 ST20-MTHFSA0A0A6YYL1 179 aa28.62■■■□□ 2.17
CERKL-201ENST00000339098 HSPA5P11021 654 aaKnown RBP28.61■■■□□ 2.17
CERKL-201ENST00000339098 POGKQ9P215 609 aa28.61■■■□□ 2.17
CERKL-201ENST00000339098 CENPJQ9HC77 1338 aaPredicted RBP28.61■■■□□ 2.17
CERKL-201ENST00000339098 QRICH2Q9H0J4 1663 aa28.59■■■□□ 2.17
CERKL-201ENST00000339098 PROSER2Q86WR7 435 aaPredicted RBP28.59■■■□□ 2.17
CERKL-201ENST00000339098 SAFB2Q14151 953 aaKnown RBP eCLIP28.58■■■□□ 2.17
CERKL-201ENST00000339098 LTBP4Q8N2S1 1624 aa28.58■■■□□ 2.17
CERKL-201ENST00000339098 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.56■■■□□ 2.16
CERKL-201ENST00000339098 RBM33Q96EV2 1170 aaKnown RBP28.55■■■□□ 2.16
CERKL-201ENST00000339098 HIRIP3Q9BW71 556 aaPredicted RBP28.55■■■□□ 2.16
CERKL-201ENST00000339098 LRRC7Q96NW7 1537 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms