RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 TARBP1Q13395 1621 aaKnown RBP9.26□□□□□ -0.93
EPHA3-201ENST00000336596 NUP153P49790 1475 aaKnown RBP9.26□□□□□ -0.93
EPHA3-201ENST00000336596 KIAA1211Q6ZU35 1233 aa9.26□□□□□ -0.93
EPHA3-201ENST00000336596 PPP6R1Q9UPN7 881 aa9.26□□□□□ -0.93
EPHA3-201ENST00000336596 TXNDC2Q86VQ3 553 aa9.26□□□□□ -0.93
EPHA3-201ENST00000336596 SLC52A1Q9NWF4 448 aa9.26□□□□□ -0.93
EPHA3-201ENST00000336596 KIAA1107Q9UPP5 1409 aa9.25□□□□□ -0.93
EPHA3-201ENST00000336596 CLSTN1O94985 981 aa9.25□□□□□ -0.93
EPHA3-201ENST00000336596 GNL2Q13823 731 aaKnown RBP9.25□□□□□ -0.93
EPHA3-201ENST00000336596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.25□□□□□ -0.93
EPHA3-201ENST00000336596 PROSER2Q86WR7 435 aaPredicted RBP9.25□□□□□ -0.93
EPHA3-201ENST00000336596 FRAT2O75474 233 aaPredicted RBP9.25□□□□□ -0.93
EPHA3-201ENST00000336596 ABCC5O15440 1437 aa9.25□□□□□ -0.93
EPHA3-201ENST00000336596 AKNAQ7Z591 1439 aa9.24□□□□□ -0.93
EPHA3-201ENST00000336596 WDR7Q9Y4E6 1490 aa9.24□□□□□ -0.93
EPHA3-201ENST00000336596 CHAF1AQ13111 956 aaPredicted RBP9.24□□□□□ -0.93
EPHA3-201ENST00000336596 NEXNQ0ZGT2 675 aa9.23□□□□□ -0.93
EPHA3-201ENST00000336596 CENPJQ9HC77 1338 aaPredicted RBP9.23□□□□□ -0.93
EPHA3-201ENST00000336596 DDX58O95786 925 aaKnown RBP9.23□□□□□ -0.93
EPHA3-201ENST00000336596 CCER2I3L3R5 266 aa9.23□□□□□ -0.93
EPHA3-201ENST00000336596 U2AF1L5P0DN76 240 aaPredicted RBP9.23□□□□□ -0.93
EPHA3-201ENST00000336596 U2AF1Q01081 240 aaKnown RBP eCLIP9.23□□□□□ -0.93
EPHA3-201ENST00000336596 NAIPQ13075 1403 aa9.23□□□□□ -0.93
EPHA3-201ENST00000336596 RAPGEF4Q8WZA2 1011 aa9.23□□□□□ -0.93
EPHA3-201ENST00000336596 TMEM132EQ6IEE7 984 aa9.23□□□□□ -0.93
EPHA3-201ENST00000336596 GPATCH8Q9UKJ3 1502 aaKnown RBP9.23□□□□□ -0.93
EPHA3-201ENST00000336596 TEFQ10587 303 aa9.22□□□□□ -0.93
EPHA3-201ENST00000336596 NGEFQ8N5V2 710 aa9.22□□□□□ -0.93
EPHA3-201ENST00000336596 PLCH2O75038 1416 aa9.22□□□□□ -0.93
EPHA3-201ENST00000336596 IRX6P78412 446 aaPredicted RBP9.22□□□□□ -0.93
EPHA3-201ENST00000336596 KRI1Q8N9T8 703 aaKnown RBP9.22□□□□□ -0.93
EPHA3-201ENST00000336596 PANK3Q9H999 370 aa9.22□□□□□ -0.93
EPHA3-201ENST00000336596 KIAA2012Q0VF49 1180 aa9.21□□□□□ -0.93
EPHA3-201ENST00000336596 LRPPRCP42704 1394 aaKnown RBP9.21□□□□□ -0.93
EPHA3-201ENST00000336596 CEP170Q5SW79 1584 aa9.21□□□□□ -0.93
EPHA3-201ENST00000336596 CFAP70Q5T0N1 1121 aa9.21□□□□□ -0.93
EPHA3-201ENST00000336596 NAP1L2Q9ULW6 460 aaPredicted RBP9.21□□□□□ -0.93
EPHA3-201ENST00000336596 CHMP3Q9Y3E7 222 aa9.21□□□□□ -0.94
EPHA3-201ENST00000336596 KIF3AQ9Y496 699 aa9.21□□□□□ -0.94
EPHA3-201ENST00000336596 ABCC2Q92887 1545 aa9.21□□□□□ -0.94
EPHA3-201ENST00000336596 DISP1Q96F81 1524 aa9.21□□□□□ -0.94
EPHA3-201ENST00000336596 PTMSP20962 102 aa9.2□□□□□ -0.94
EPHA3-201ENST00000336596 RBM33Q96EV2 1170 aaKnown RBP9.2□□□□□ -0.94
EPHA3-201ENST00000336596 RPGRIP1LQ68CZ1 1315 aa9.2□□□□□ -0.94
EPHA3-201ENST00000336596 GOLGA6L4A6NEF3 574 aa9.19□□□□□ -0.94
EPHA3-201ENST00000336596 NCOA1Q15788 1441 aa9.19□□□□□ -0.94
EPHA3-201ENST00000336596 TULP1O00294 542 aaPredicted RBP9.19□□□□□ -0.94
EPHA3-201ENST00000336596 WDHD1O75717 1129 aaPredicted RBP9.19□□□□□ -0.94
EPHA3-201ENST00000336596 ITSN2Q9NZM3 1697 aa9.19□□□□□ -0.94
EPHA3-201ENST00000336596 TCEAL9Q9UHQ7 104 aa9.19□□□□□ -0.94
EPHA3-201ENST00000336596 ERBINQ96RT1 1412 aa9.19□□□□□ -0.94
EPHA3-201ENST00000336596 NLRP13Q86W25 1043 aa9.18□□□□□ -0.94
EPHA3-201ENST00000336596 FRAT1Q92837 279 aaPredicted RBP9.18□□□□□ -0.94
EPHA3-201ENST00000336596 LTV1Q96GA3 475 aaPredicted RBP9.18□□□□□ -0.94
EPHA3-201ENST00000336596 KLHL34Q8N239 644 aa9.17□□□□□ -0.94
EPHA3-201ENST00000336596 DHX29Q7Z478 1369 aaKnown RBP9.17□□□□□ -0.94
EPHA3-201ENST00000336596 HSP90AB1P08238 724 aaKnown RBP9.16□□□□□ -0.94
EPHA3-201ENST00000336596 TRIM44Q96DX7 344 aaPredicted RBP9.16□□□□□ -0.94
EPHA3-201ENST00000336596 ANKRD30BQ9BXX2 1392 aa9.16□□□□□ -0.94
EPHA3-201ENST00000336596 SLC26A8Q96RN1 970 aa9.16□□□□□ -0.94
EPHA3-201ENST00000336596 ZNF518AQ6AHZ1 1483 aa9.16□□□□□ -0.94
EPHA3-201ENST00000336596 SYCP2Q9BX26 1530 aa9.15□□□□□ -0.94
EPHA3-201ENST00000336596 RWDD1Q9H446 243 aaPredicted RBP9.15□□□□□ -0.94
EPHA3-201ENST00000336596 CABP2Q9NPB3 220 aa9.15□□□□□ -0.94
EPHA3-201ENST00000336596 SUPT16HQ9Y5B9 1047 aaKnown RBP9.15□□□□□ -0.94
EPHA3-201ENST00000336596 CSPP1Q1MSJ5 1256 aa9.15□□□□□ -0.95
EPHA3-201ENST00000336596 PRAM1Q96QH2 718 aa9.15□□□□□ -0.95
EPHA3-201ENST00000336596 NBPF1Q3BBV0 1214 aa9.14□□□□□ -0.95
EPHA3-201ENST00000336596 VPS37DQ86XT2 251 aa9.14□□□□□ -0.95
EPHA3-201ENST00000336596 PMFBP1Q8TBY8 1022 aa9.14□□□□□ -0.95
EPHA3-201ENST00000336596 TPM4P67936 248 aa9.14□□□□□ -0.95
EPHA3-201ENST00000336596 CEBPAP49715 358 aaPredicted RBP9.14□□□□□ -0.95
EPHA3-201ENST00000336596 MYBBP1AQ9BQG0 1328 aaKnown RBP9.14□□□□□ -0.95
EPHA3-201ENST00000336596 MARCH6O60337 910 aa9.14□□□□□ -0.95
EPHA3-201ENST00000336596 FBXO31Q5XUX0 539 aaPredicted RBP9.13□□□□□ -0.95
EPHA3-201ENST00000336596 KIF6Q6ZMV9 814 aa9.13□□□□□ -0.95
EPHA3-201ENST00000336596 ZNF692Q9BU19 519 aaPredicted RBP9.13□□□□□ -0.95
EPHA3-201ENST00000336596 SYTL4Q96C24 671 aaPredicted RBP9.13□□□□□ -0.95
EPHA3-201ENST00000336596 PLEKHO1Q53GL0 409 aaPredicted RBP9.13□□□□□ -0.95
EPHA3-201ENST00000336596 PDE3BQ13370 1112 aa9.13□□□□□ -0.95
EPHA3-201ENST00000336596 CHD1O14646 1710 aa9.12□□□□□ -0.95
EPHA3-201ENST00000336596 CFAP43Q8NDM7 1665 aa9.12□□□□□ -0.95
EPHA3-201ENST00000336596 TATP17735 454 aaPredicted RBP9.12□□□□□ -0.95
EPHA3-201ENST00000336596 SYNE3Q6ZMZ3 975 aa9.12□□□□□ -0.95
EPHA3-201ENST00000336596 SAMD9Q5K651 1589 aa9.12□□□□□ -0.95
EPHA3-201ENST00000336596 KDM5BQ9UGL1 1544 aa9.12□□□□□ -0.95
EPHA3-201ENST00000336596 A2MP01023 1474 aa9.12□□□□□ -0.95
EPHA3-201ENST00000336596 TRAPPC8Q9Y2L5 1435 aa9.12□□□□□ -0.95
EPHA3-201ENST00000336596 KIF7Q2M1P5 1343 aa9.12□□□□□ -0.95
EPHA3-201ENST00000336596 CCDC146Q8IYE0 955 aa9.12□□□□□ -0.95
EPHA3-201ENST00000336596 PNISRQ8TF01 805 aaKnown RBP9.12□□□□□ -0.95
EPHA3-201ENST00000336596 SPG7Q9UQ90 795 aa9.12□□□□□ -0.95
EPHA3-201ENST00000336596 NBPF8Q3BBV2 869 aa9.11□□□□□ -0.95
EPHA3-201ENST00000336596 HSP90AB4PQ58FF6 505 aa9.11□□□□□ -0.95
EPHA3-201ENST00000336596 HSCBQ8IWL3 235 aa9.11□□□□□ -0.95
EPHA3-201ENST00000336596 ABCC10Q5T3U5 1492 aa9.11□□□□□ -0.95
EPHA3-201ENST00000336596 CCDC7Q96M83 1385 aa9.11□□□□□ -0.95
EPHA3-201ENST00000336596 TOM1O60784 492 aa9.11□□□□□ -0.95
EPHA3-201ENST00000336596 AKAP17AQ02040 695 aaKnown RBP9.11□□□□□ -0.95
EPHA3-201ENST00000336596 IDI1Q13907 227 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms