RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 NPATQ14207 1427 aa22.65■■□□□ 1.22
TMEM39B-201ENST00000336294 ABCC3O15438 1527 aa22.65■■□□□ 1.22
TMEM39B-201ENST00000336294 EIF3AQ14152 1382 aaKnown RBP22.64■■□□□ 1.22
TMEM39B-201ENST00000336294 ADGRB3O60242 1522 aa22.64■■□□□ 1.21
TMEM39B-201ENST00000336294 PARD3Q8TEW0 1356 aa22.63■■□□□ 1.21
TMEM39B-201ENST00000336294 PER1O15534 1290 aaPredicted RBP22.63■■□□□ 1.21
TMEM39B-201ENST00000336294 PNISRQ8TF01 805 aaKnown RBP22.63■■□□□ 1.21
TMEM39B-201ENST00000336294 BCANQ96GW7 911 aa22.61■■□□□ 1.21
TMEM39B-201ENST00000336294 CDCA8Q53HL2 280 aa22.61■■□□□ 1.21
TMEM39B-201ENST00000336294 CAMSAP1Q5T5Y3 1602 aa22.61■■□□□ 1.21
TMEM39B-201ENST00000336294 NRXN1Q9ULB1 1477 aa22.6■■□□□ 1.21
TMEM39B-201ENST00000336294 PANK3Q9H999 370 aa22.59■■□□□ 1.21
TMEM39B-201ENST00000336294 ADGRF5Q8IZF2 1346 aa22.57■■□□□ 1.2
TMEM39B-201ENST00000336294 NLRP13Q86W25 1043 aa22.57■■□□□ 1.2
TMEM39B-201ENST00000336294 LRPPRCP42704 1394 aaKnown RBP22.57■■□□□ 1.2
TMEM39B-201ENST00000336294 ZC3H13Q5T200 1668 aaKnown RBP22.56■■□□□ 1.2
TMEM39B-201ENST00000336294 SYNMO15061 1565 aa22.55■■□□□ 1.2
TMEM39B-201ENST00000336294 SLC24A1O60721 1099 aa22.54■■□□□ 1.2
TMEM39B-201ENST00000336294 CFAP70Q5T0N1 1121 aa22.54■■□□□ 1.2
TMEM39B-201ENST00000336294 DIP2BQ9P265 1576 aa22.54■■□□□ 1.2
TMEM39B-201ENST00000336294 NOS1P29475 1434 aa22.53■■□□□ 1.2
TMEM39B-201ENST00000336294 PPLO60437 1756 aa22.53■■□□□ 1.2
TMEM39B-201ENST00000336294 CHGAP10645 457 aaKnown RBP22.53■■□□□ 1.2
TMEM39B-201ENST00000336294 YEATS2Q9ULM3 1422 aa22.52■■□□□ 1.2
TMEM39B-201ENST00000336294 RPGRIP1LQ68CZ1 1315 aa22.52■■□□□ 1.2
TMEM39B-201ENST00000336294 SETBP1Q9Y6X0 1596 aa22.52■■□□□ 1.2
TMEM39B-201ENST00000336294 ZMYM4Q5VZL5 1548 aa22.52■■□□□ 1.2
TMEM39B-201ENST00000336294 ARHGAP31Q2M1Z3 1444 aa22.52■■□□□ 1.19
TMEM39B-201ENST00000336294 TRHP20396 242 aaPredicted RBP22.51■■□□□ 1.19
TMEM39B-201ENST00000336294 SMG6Q86US8 1419 aaKnown RBP22.51■■□□□ 1.19
TMEM39B-201ENST00000336294 CFAP65Q6ZU64 1925 aaKnown RBP22.51■■□□□ 1.19
TMEM39B-201ENST00000336294 SIGLEC1Q9BZZ2 1709 aa22.5■■□□□ 1.19
TMEM39B-201ENST00000336294 TSHZ2Q9NRE2 1034 aa22.5■■□□□ 1.19
TMEM39B-201ENST00000336294 PIK3C2BO00750 1634 aa22.5■■□□□ 1.19
TMEM39B-201ENST00000336294 KDM5AP29375 1690 aaKnown RBP22.5■■□□□ 1.19
TMEM39B-201ENST00000336294 FAM69CQ0P6D2 419 aa22.5■■□□□ 1.19
TMEM39B-201ENST00000336294 CC2D1BQ5T0F9 858 aaKnown RBP22.5■■□□□ 1.19
TMEM39B-201ENST00000336294 ERICH6BQ5W0A0 696 aa22.49■■□□□ 1.19
TMEM39B-201ENST00000336294 MYO3AQ8NEV4 1616 aa22.49■■□□□ 1.19
TMEM39B-201ENST00000336294 PIK3C2GO75747 1445 aa22.48■■□□□ 1.19
TMEM39B-201ENST00000336294 MYOM1P52179 1685 aa22.47■■□□□ 1.19
TMEM39B-201ENST00000336294 KNSTRNQ9Y448 316 aa22.45■■□□□ 1.19
TMEM39B-201ENST00000336294 NUDCQ9Y266 331 aa22.45■■□□□ 1.18
TMEM39B-201ENST00000336294 ERVK-7P63135 1459 aa22.44■■□□□ 1.18
TMEM39B-201ENST00000336294 SBNO2Q9Y2G9 1366 aa22.44■■□□□ 1.18
TMEM39B-201ENST00000336294 INSRP06213 1382 aa22.43■■□□□ 1.18
TMEM39B-201ENST00000336294 C14orf93Q9H972 538 aaKnown RBP22.43■■□□□ 1.18
TMEM39B-201ENST00000336294 ASXL1Q8IXJ9 1541 aa22.42■■□□□ 1.18
TMEM39B-201ENST00000336294 IRX6P78412 446 aaPredicted RBP22.41■■□□□ 1.18
TMEM39B-201ENST00000336294 ADGRB1O14514 1584 aa22.4■■□□□ 1.18
TMEM39B-201ENST00000336294 NEXMIFQ5QGS0 1516 aa22.39■■□□□ 1.18
TMEM39B-201ENST00000336294 REREQ9P2R6 1566 aa22.39■■□□□ 1.17
TMEM39B-201ENST00000336294 TSPOAP1O95153 1857 aa22.39■■□□□ 1.17
TMEM39B-201ENST00000336294 NPC1L1Q9UHC9 1359 aa22.39■■□□□ 1.17
TMEM39B-201ENST00000336294 CENPJQ9HC77 1338 aaPredicted RBP22.39■■□□□ 1.17
TMEM39B-201ENST00000336294 AMER1Q5JTC6 1135 aaPredicted RBP22.38■■□□□ 1.17
TMEM39B-201ENST00000336294 SLC52A1Q9NWF4 448 aa22.38■■□□□ 1.17
TMEM39B-201ENST00000336294 PREX1Q8TCU6 1659 aa22.38■■□□□ 1.17
TMEM39B-201ENST00000336294 VGFO15240 615 aaPredicted RBP22.37■■□□□ 1.17
TMEM39B-201ENST00000336294 BLMP54132 1417 aaPredicted RBP22.35■■□□□ 1.17
TMEM39B-201ENST00000336294 QRICH2Q9H0J4 1663 aa22.35■■□□□ 1.17
TMEM39B-201ENST00000336294 AGLP35573 1532 aa22.34■■□□□ 1.17
TMEM39B-201ENST00000336294 IDI1Q13907 227 aa22.34■■□□□ 1.17
TMEM39B-201ENST00000336294 PPP4R2Q9NY27 417 aa22.34■■□□□ 1.17
TMEM39B-201ENST00000336294 ZFYVE9O95405 1425 aa22.33■■□□□ 1.16
TMEM39B-201ENST00000336294 PPP2R1AP30153 589 aa22.33■■□□□ 1.16
TMEM39B-201ENST00000336294 TRAK1Q9UPV9 953 aa22.33■■□□□ 1.16
TMEM39B-201ENST00000336294 PDE3BQ13370 1112 aa22.31■■□□□ 1.16
TMEM39B-201ENST00000336294 PPP6R1Q9UPN7 881 aa22.31■■□□□ 1.16
TMEM39B-201ENST00000336294 SENP3-EIF4A1A0A087X0R7 540 aa22.3■■□□□ 1.16
TMEM39B-201ENST00000336294 RNF123Q5XPI4 1314 aa22.3■■□□□ 1.16
TMEM39B-201ENST00000336294 TMEM131LA2VDJ0 1609 aa22.3■■□□□ 1.16
TMEM39B-201ENST00000336294 TMEM132EQ6IEE7 984 aa22.29■■□□□ 1.16
TMEM39B-201ENST00000336294 MYO5BQ9ULV0 1848 aa22.26■■□□□ 1.15
TMEM39B-201ENST00000336294 ARHGEF28Q8N1W1 1705 aaKnown RBP22.26■■□□□ 1.15
TMEM39B-201ENST00000336294 KIF13AQ9H1H9 1805 aa22.26■■□□□ 1.15
TMEM39B-201ENST00000336294 NUTM2DQ5VT03 806 aaPredicted RBP22.25■■□□□ 1.15
TMEM39B-201ENST00000336294 WDR43Q15061 677 aaKnown RBP eCLIP22.24■■□□□ 1.15
TMEM39B-201ENST00000336294 CARD14Q9BXL6 1004 aa22.23■■□□□ 1.15
TMEM39B-201ENST00000336294 ARHGEF40Q8TER5 1519 aa22.22■■□□□ 1.15
TMEM39B-201ENST00000336294 CLTCQ00610 1675 aaKnown RBP22.22■■□□□ 1.15
TMEM39B-201ENST00000336294 PUS7Q96PZ0 661 aaKnown RBP22.22■■□□□ 1.15
TMEM39B-201ENST00000336294 FBXO31Q5XUX0 539 aaPredicted RBP22.21■■□□□ 1.15
TMEM39B-201ENST00000336294 ADAMTS8Q9UP79 889 aa22.21■■□□□ 1.15
TMEM39B-201ENST00000336294 SALL2Q9Y467 1007 aaPredicted RBP22.21■■□□□ 1.15
TMEM39B-201ENST00000336294 EVC2Q86UK5 1308 aa22.19■■□□□ 1.14
TMEM39B-201ENST00000336294 TULP4Q9NRJ4 1543 aa22.17■■□□□ 1.14
TMEM39B-201ENST00000336294 NSD3Q9BZ95 1437 aa22.17■■□□□ 1.14
TMEM39B-201ENST00000336294 SPATA31D1Q6ZQQ2 1576 aa22.17■■□□□ 1.14
TMEM39B-201ENST00000336294 USP32Q8NFA0 1604 aa22.16■■□□□ 1.14
TMEM39B-201ENST00000336294 STAG3Q9UJ98 1225 aa22.15■■□□□ 1.14
TMEM39B-201ENST00000336294 SLC12A5Q9H2X9 1139 aa22.14■■□□□ 1.13
TMEM39B-201ENST00000336294 RCAN3Q9UKA8 241 aa22.14■■□□□ 1.13
TMEM39B-201ENST00000336294 B4GALNT3Q6L9W6 998 aa22.13■■□□□ 1.13
TMEM39B-201ENST00000336294 RRP1P56182 461 aaKnown RBP22.11■■□□□ 1.13
TMEM39B-201ENST00000336294 CDCA7LQ96GN5 454 aa22.11■■□□□ 1.13
TMEM39B-201ENST00000336294 ALKQ9UM73 1620 aa22.11■■□□□ 1.13
TMEM39B-201ENST00000336294 YTHDC2Q9H6S0 1430 aaKnown RBP22.1■■□□□ 1.13
TMEM39B-201ENST00000336294 PTPRMP28827 1452 aa22.1■■□□□ 1.13
TMEM39B-201ENST00000336294 STK26Q9P289 416 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms