RNA–Protein interactions for RNA: ENST00000335367.7

AGAP3-201, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best) BASIC

Gene AGAP3, Length 2,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-201ENST00000335367 EIF2AK4Q9P2K8 1649 aaKnown RBP29.27■■■□□ 2.28
AGAP3-201ENST00000335367 SAMD9LQ8IVG5 1584 aa29.27■■■□□ 2.28
AGAP3-201ENST00000335367 IGHDP01880 384 aa29.26■■■□□ 2.27
AGAP3-201ENST00000335367 APAF1O14727 1248 aa29.24■■■□□ 2.27
AGAP3-201ENST00000335367 TRMT2AQ8IZ69 625 aaKnown RBP29.23■■■□□ 2.27
AGAP3-201ENST00000335367 USP19O94966 1318 aa29.23■■■□□ 2.27
AGAP3-201ENST00000335367 RSPH4AQ5TD94 716 aa29.22■■■□□ 2.27
AGAP3-201ENST00000335367 EIF3AQ14152 1382 aaKnown RBP29.21■■■□□ 2.27
AGAP3-201ENST00000335367 CDC42BPBQ9Y5S2 1711 aa29.21■■■□□ 2.27
AGAP3-201ENST00000335367 SEC24BO95487 1268 aa29.21■■■□□ 2.27
AGAP3-201ENST00000335367 NKTRP30414 1462 aaKnown RBP29.19■■■□□ 2.26
AGAP3-201ENST00000335367 UNC13BO14795 1591 aa29.19■■■□□ 2.26
AGAP3-201ENST00000335367 POGKQ9P215 609 aa29.19■■■□□ 2.26
AGAP3-201ENST00000335367 FAM43AQ8N2R8 423 aa29.17■■■□□ 2.26
AGAP3-201ENST00000335367 SLKQ9H2G2 1235 aaPredicted RBP29.17■■■□□ 2.26
AGAP3-201ENST00000335367 CLASP1Q7Z460 1538 aa29.16■■■□□ 2.26
AGAP3-201ENST00000335367 DMRT2Q9Y5R5 561 aa29.16■■■□□ 2.26
AGAP3-201ENST00000335367 SYCP2Q9BX26 1530 aa29.15■■■□□ 2.26
AGAP3-201ENST00000335367 RNF17Q9BXT8 1623 aaKnown RBP29.13■■■□□ 2.25
AGAP3-201ENST00000335367 PIK3C2GO75747 1445 aa29.13■■■□□ 2.25
AGAP3-201ENST00000335367 E9PSI1 815 aa29.12■■■□□ 2.25
AGAP3-201ENST00000335367 ASXL1Q8IXJ9 1541 aa29.12■■■□□ 2.25
AGAP3-201ENST00000335367 PREX2Q70Z35 1606 aa29.12■■■□□ 2.25
AGAP3-201ENST00000335367 VIRMAQ69YN4 1812 aaKnown RBP29.12■■■□□ 2.25
AGAP3-201ENST00000335367 COG6Q9Y2V7 657 aa29.12■■■□□ 2.25
AGAP3-201ENST00000335367 IQGAP3Q86VI3 1631 aa29.11■■■□□ 2.25
AGAP3-201ENST00000335367 PANK1Q8TE04 598 aa29.11■■■□□ 2.25
AGAP3-201ENST00000335367 CDCA8Q53HL2 280 aa29.1■■■□□ 2.25
AGAP3-201ENST00000335367 CANXP27824 592 aaKnown RBP29.1■■■□□ 2.25
AGAP3-201ENST00000335367 BECN1Q14457 450 aa29.1■■■□□ 2.25
AGAP3-201ENST00000335367 CLUAP1Q96AJ1 413 aa29.09■■■□□ 2.25
AGAP3-201ENST00000335367 CGNL1Q0VF96 1302 aa29.09■■■□□ 2.25
AGAP3-201ENST00000335367 CHD1O14646 1710 aa29.07■■■□□ 2.24
AGAP3-201ENST00000335367 SYNMO15061 1565 aa29.07■■■□□ 2.24
AGAP3-201ENST00000335367 MAPK8IP3Q9UPT6 1336 aa29.06■■■□□ 2.24
AGAP3-201ENST00000335367 UBE2Q2Q8WVN8 375 aa29.06■■■□□ 2.24
AGAP3-201ENST00000335367 ATP10AO60312 1499 aa29.05■■■□□ 2.24
AGAP3-201ENST00000335367 PDE3AQ14432 1141 aa29.05■■■□□ 2.24
AGAP3-201ENST00000335367 RSPH6AQ9H0K4 717 aa29.05■■■□□ 2.24
AGAP3-201ENST00000335367 ARHGAP5Q13017 1502 aa29.05■■■□□ 2.24
AGAP3-201ENST00000335367 ABCC2Q92887 1545 aa29.04■■■□□ 2.24
AGAP3-201ENST00000335367 CENPJQ9HC77 1338 aaPredicted RBP29.04■■■□□ 2.24
AGAP3-201ENST00000335367 IQGAP1P46940 1657 aa29.04■■■□□ 2.24
AGAP3-201ENST00000335367 MAST1Q9Y2H9 1570 aa29.02■■■□□ 2.24
AGAP3-201ENST00000335367 MADDQ8WXG6 1647 aa29■■■□□ 2.23
AGAP3-201ENST00000335367 SCAF11Q99590 1463 aaKnown RBP28.99■■■□□ 2.23
AGAP3-201ENST00000335367 SHROOM2Q13796 1616 aa28.99■■■□□ 2.23
AGAP3-201ENST00000335367 ARXQ96QS3 562 aa28.98■■■□□ 2.23
AGAP3-201ENST00000335367 NLRP1Q9C000 1473 aa28.98■■■□□ 2.23
AGAP3-201ENST00000335367 NPC1L1Q9UHC9 1359 aa28.98■■■□□ 2.23
AGAP3-201ENST00000335367 MYOM1P52179 1685 aa28.97■■■□□ 2.23
AGAP3-201ENST00000335367 ANTXR1Q9H6X2 564 aa28.97■■■□□ 2.23
AGAP3-201ENST00000335367 NEUROD2Q15784 382 aa28.96■■■□□ 2.23
AGAP3-201ENST00000335367 WWC1Q8IX03 1113 aa28.96■■■□□ 2.23
AGAP3-201ENST00000335367 RRAGDQ9NQL2 400 aaPredicted RBP28.96■■■□□ 2.23
AGAP3-201ENST00000335367 TTC37Q6PGP7 1564 aa28.95■■■□□ 2.23
AGAP3-201ENST00000335367 PLXNC1O60486 1568 aa28.95■■■□□ 2.22
AGAP3-201ENST00000335367 DUOX2Q9NRD8 1548 aa28.94■■■□□ 2.22
AGAP3-201ENST00000335367 UPF2Q9HAU5 1272 aaKnown RBP28.94■■■□□ 2.22
AGAP3-201ENST00000335367 L1TD1Q5T7N2 865 aaKnown RBP28.93■■■□□ 2.22
AGAP3-201ENST00000335367 SPRYD3Q8NCJ5 442 aa28.92■■■□□ 2.22
AGAP3-201ENST00000335367 TBC1D2Q9BYX2 928 aa28.92■■■□□ 2.22
AGAP3-201ENST00000335367 PCDHB15Q9Y5E8 787 aa28.92■■■□□ 2.22
AGAP3-201ENST00000335367 TNNQ9UQP3 1299 aa28.92■■■□□ 2.22
AGAP3-201ENST00000335367 NINLQ9Y2I6 1382 aa28.91■■■□□ 2.22
AGAP3-201ENST00000335367 CARD14Q9BXL6 1004 aa28.91■■■□□ 2.22
AGAP3-201ENST00000335367 TBC1D32Q96NH3 1257 aa28.9■■■□□ 2.22
AGAP3-201ENST00000335367 RRP7AQ9Y3A4 280 aaKnown RBP28.9■■■□□ 2.22
AGAP3-201ENST00000335367 PMFBP1Q8TBY8 1022 aa28.89■■■□□ 2.22
AGAP3-201ENST00000335367 NGEFQ8N5V2 710 aa28.89■■■□□ 2.22
AGAP3-201ENST00000335367 PDZRN3Q9UPQ7 1066 aa28.89■■■□□ 2.22
AGAP3-201ENST00000335367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.89■■■□□ 2.212e-6■■■■□ 25.9
AGAP3-201ENST00000335367 RLBP1P12271 317 aa28.88■■■□□ 2.21
AGAP3-201ENST00000335367 BCL2L13Q9BXK5 485 aa28.88■■■□□ 2.21
AGAP3-201ENST00000335367 KDM5AP29375 1690 aaKnown RBP28.87■■■□□ 2.21
AGAP3-201ENST00000335367 RARSP54136 660 aaKnown RBP28.87■■■□□ 2.21
AGAP3-201ENST00000335367 SCAPERQ9BY12 1400 aa28.86■■■□□ 2.21
AGAP3-201ENST00000335367 SPHKAPQ2M3C7 1700 aa28.85■■■□□ 2.21
AGAP3-201ENST00000335367 GZF1Q9H116 711 aaPredicted RBP28.84■■■□□ 2.21
AGAP3-201ENST00000335367 TNNT2P45379 298 aaPredicted RBP28.83■■■□□ 2.21
AGAP3-201ENST00000335367 XRCC6P12956 609 aaKnown RBP eCLIP28.82■■■□□ 2.26e-6■■■■■ 31.4
AGAP3-201ENST00000335367 CFAP70Q5T0N1 1121 aa28.8■■■□□ 2.2
AGAP3-201ENST00000335367 CEP152O94986 1710 aa28.8■■■□□ 2.2
AGAP3-201ENST00000335367 GOLGA6L3A6NEY3 463 aa28.8■■■□□ 2.2
AGAP3-201ENST00000335367 ERVK-7P63135 1459 aa28.78■■■□□ 2.2
AGAP3-201ENST00000335367 POLR3AO14802 1390 aaPredicted RBP28.78■■■□□ 2.2
AGAP3-201ENST00000335367 MCM4P33991 863 aa28.77■■■□□ 2.2
AGAP3-201ENST00000335367 TCP11L2Q8N4U5 519 aa28.77■■■□□ 2.2
AGAP3-201ENST00000335367 STAC3Q96MF2 364 aa28.77■■■□□ 2.2
AGAP3-201ENST00000335367 RWDD1Q9H446 243 aaPredicted RBP28.77■■■□□ 2.2
AGAP3-201ENST00000335367 PANK2Q9BZ23 570 aa28.77■■■□□ 2.2
AGAP3-201ENST00000335367 TRPM2O94759 1503 aa28.76■■■□□ 2.19
AGAP3-201ENST00000335367 CLTCL1P53675 1640 aa28.76■■■□□ 2.19
AGAP3-201ENST00000335367 RUNDC1Q96C34 613 aa28.75■■■□□ 2.19
AGAP3-201ENST00000335367 AAMPQ13685 434 aa28.75■■■□□ 2.19
AGAP3-201ENST00000335367 MORC1Q86VD1 984 aa28.73■■■□□ 2.19
AGAP3-201ENST00000335367 FSD2A1L4K1 749 aa28.72■■■□□ 2.19
AGAP3-201ENST00000335367 MFAP1P55081 439 aaKnown RBP28.71■■■□□ 2.19
AGAP3-201ENST00000335367 TRAPPC8Q9Y2L5 1435 aa28.71■■■□□ 2.19
AGAP3-201ENST00000335367 C22orf23Q9BZE7 217 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms