RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 ZNF326Q5BKZ1 582 aaKnown RBP21.89■■□□□ 1.09
CMC1-201ENST00000334841 L3MBTL2Q969R5 705 aa21.89■■□□□ 1.09
CMC1-201ENST00000334841 MYOM2P54296 1465 aa21.89■■□□□ 1.09
CMC1-201ENST00000334841 THEMISQ8N1K5 641 aaPredicted RBP21.87■■□□□ 1.09
CMC1-201ENST00000334841 RPGRIP1LQ68CZ1 1315 aa21.85■■□□□ 1.09
CMC1-201ENST00000334841 NRXN1Q9ULB1 1477 aa21.83■■□□□ 1.09
CMC1-201ENST00000334841 DCAF11Q8TEB1 546 aa21.83■■□□□ 1.09
CMC1-201ENST00000334841 TIMELESSQ9UNS1 1208 aa21.83■■□□□ 1.09
CMC1-201ENST00000334841 SCAF11Q99590 1463 aaKnown RBP21.83■■□□□ 1.08
CMC1-201ENST00000334841 POLR1AO95602 1720 aaPredicted RBP21.82■■□□□ 1.08
CMC1-201ENST00000334841 NUTM2DQ5VT03 806 aaPredicted RBP21.81■■□□□ 1.08
CMC1-201ENST00000334841 HSPA2P54652 639 aa21.8■■□□□ 1.08
CMC1-201ENST00000334841 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
CMC1-201ENST00000334841 LTKP29376 864 aa21.79■■□□□ 1.08
CMC1-201ENST00000334841 KDM2AQ9Y2K7 1162 aa21.79■■□□□ 1.08
CMC1-201ENST00000334841 NRXN3Q9Y4C0 1643 aa21.79■■□□□ 1.08
CMC1-201ENST00000334841 PIK3C2GO75747 1445 aa21.79■■□□□ 1.08
CMC1-201ENST00000334841 ADGRF5Q8IZF2 1346 aa21.79■■□□□ 1.08
CMC1-201ENST00000334841 IQGAP1P46940 1657 aa21.78■■□□□ 1.08
CMC1-201ENST00000334841 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.77■■□□□ 1.08
CMC1-201ENST00000334841 SETBP1Q9Y6X0 1596 aa21.77■■□□□ 1.08
CMC1-201ENST00000334841 PPP1R15AO75807 674 aaPredicted RBP21.76■■□□□ 1.07
CMC1-201ENST00000334841 TXNDC2Q86VQ3 553 aa21.76■■□□□ 1.07
CMC1-201ENST00000334841 PLEKHG1Q9ULL1 1385 aa21.75■■□□□ 1.07
CMC1-201ENST00000334841 VGFO15240 615 aaPredicted RBP21.75■■□□□ 1.07
CMC1-201ENST00000334841 STAC3Q96MF2 364 aa21.75■■□□□ 1.07
CMC1-201ENST00000334841 EID1Q9Y6B2 187 aa21.75■■□□□ 1.07
CMC1-201ENST00000334841 MED14O60244 1454 aa21.74■■□□□ 1.07
CMC1-201ENST00000334841 STRCQ7RTU9 1775 aa21.74■■□□□ 1.07
CMC1-201ENST00000334841 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
CMC1-201ENST00000334841 SETD1AO15047 1707 aaKnown RBP21.73■■□□□ 1.07
CMC1-201ENST00000334841 HDGFP51858 240 aaKnown RBP21.73■■□□□ 1.07
CMC1-201ENST00000334841 ANKLE2Q86XL3 938 aa21.73■■□□□ 1.07
CMC1-201ENST00000334841 LAMC1P11047 1609 aa21.73■■□□□ 1.07
CMC1-201ENST00000334841 NBPF8Q3BBV2 869 aa21.72■■□□□ 1.07
CMC1-201ENST00000334841 NCKAP5LQ9HCH0 1330 aa21.71■■□□□ 1.07
CMC1-201ENST00000334841 NPHP4O75161 1426 aaPredicted RBP21.71■■□□□ 1.07
CMC1-201ENST00000334841 ALKQ9UM73 1620 aa21.7■■□□□ 1.06
CMC1-201ENST00000334841 KIAA1210Q9ULL0 1709 aa21.7■■□□□ 1.06
CMC1-201ENST00000334841 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
CMC1-201ENST00000334841 ADAMTS13Q76LX8 1427 aa21.7■■□□□ 1.06
CMC1-201ENST00000334841 RALGAPBQ86X10 1494 aa21.7■■□□□ 1.06
CMC1-201ENST00000334841 ASXL1Q8IXJ9 1541 aa21.7■■□□□ 1.06
CMC1-201ENST00000334841 ZEB1P37275 1124 aaPredicted RBP21.69■■□□□ 1.06
CMC1-201ENST00000334841 DIP2AQ14689 1571 aa21.69■■□□□ 1.06
CMC1-201ENST00000334841 ADGRB1O14514 1584 aa21.65■■□□□ 1.06
CMC1-201ENST00000334841 CFAP70Q5T0N1 1121 aa21.64■■□□□ 1.05
CMC1-201ENST00000334841 C14orf93Q9H972 538 aaKnown RBP21.63■■□□□ 1.05
CMC1-201ENST00000334841 BCANQ96GW7 911 aa21.62■■□□□ 1.05
CMC1-201ENST00000334841 SLC26A8Q96RN1 970 aa21.61■■□□□ 1.05
CMC1-201ENST00000334841 ROCK2O75116 1388 aaKnown RBP21.6■■□□□ 1.05
CMC1-201ENST00000334841 METP08581 1390 aa21.6■■□□□ 1.05
CMC1-201ENST00000334841 GPRASP1Q5JY77 1395 aa21.6■■□□□ 1.05
CMC1-201ENST00000334841 NBPF1Q3BBV0 1214 aa21.59■■□□□ 1.05
CMC1-201ENST00000334841 TBX22Q9Y458 520 aa21.57■■□□□ 1.04
CMC1-201ENST00000334841 PTPRUQ92729 1446 aa21.55■■□□□ 1.04
CMC1-201ENST00000334841 XRN1Q8IZH2 1706 aaKnown RBP21.55■■□□□ 1.04
CMC1-201ENST00000334841 TMEM132EQ6IEE7 984 aa21.55■■□□□ 1.04
CMC1-201ENST00000334841 NWD1Q149M9 1564 aa21.54■■□□□ 1.04
CMC1-201ENST00000334841 KNDC1Q76NI1 1749 aa21.54■■□□□ 1.04
CMC1-201ENST00000334841 YTHDC2Q9H6S0 1430 aaKnown RBP21.54■■□□□ 1.04
CMC1-201ENST00000334841 PIK3R4Q99570 1358 aa21.53■■□□□ 1.04
CMC1-201ENST00000334841 LRPPRCP42704 1394 aaKnown RBP21.51■■□□□ 1.03
CMC1-201ENST00000334841 CPS1P31327 1500 aa21.51■■□□□ 1.03
CMC1-201ENST00000334841 CHD2O14647 1828 aaKnown RBP21.51■■□□□ 1.03
CMC1-201ENST00000334841 ARHGEF28Q8N1W1 1705 aaKnown RBP21.51■■□□□ 1.03
CMC1-201ENST00000334841 TECPR2O15040 1411 aa21.5■■□□□ 1.03
CMC1-201ENST00000334841 CARD11Q9BXL7 1154 aa21.5■■□□□ 1.03
CMC1-201ENST00000334841 DLC1Q96QB1 1528 aa21.49■■□□□ 1.03
CMC1-201ENST00000334841 STRCP1A6NGW2 1772 aa21.48■■□□□ 1.03
CMC1-201ENST00000334841 DMRT2Q9Y5R5 561 aa21.48■■□□□ 1.03
CMC1-201ENST00000334841 USP47Q96K76 1375 aa21.47■■□□□ 1.03
CMC1-201ENST00000334841 PTCH1Q13635 1447 aa21.46■■□□□ 1.03
CMC1-201ENST00000334841 ABCC11Q96J66 1382 aa21.46■■□□□ 1.03
CMC1-201ENST00000334841 STK26Q9P289 416 aa21.45■■□□□ 1.02
CMC1-201ENST00000334841 NKTRP30414 1462 aaKnown RBP21.45■■□□□ 1.02
CMC1-201ENST00000334841 ROBO2Q9HCK4 1378 aa21.44■■□□□ 1.02
CMC1-201ENST00000334841 TRAK1Q9UPV9 953 aa21.43■■□□□ 1.02
CMC1-201ENST00000334841 AMOTL2Q9Y2J4 779 aa21.43■■□□□ 1.02
CMC1-201ENST00000334841 KCNA6P17658 529 aa21.42■■□□□ 1.02
CMC1-201ENST00000334841 FAM135BQ49AJ0 1406 aa21.41■■□□□ 1.02
CMC1-201ENST00000334841 EIF3AQ14152 1382 aaKnown RBP21.41■■□□□ 1.02
CMC1-201ENST00000334841 ZNF335Q9H4Z2 1342 aaPredicted RBP21.41■■□□□ 1.02
CMC1-201ENST00000334841 QRICH2Q9H0J4 1663 aa21.4■■□□□ 1.02
CMC1-201ENST00000334841 PLEKHH1Q9ULM0 1364 aa21.4■■□□□ 1.02
CMC1-201ENST00000334841 PRAM1Q96QH2 718 aa21.37■■□□□ 1.01
CMC1-201ENST00000334841 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
CMC1-201ENST00000334841 EIF4G2P78344 907 aaKnown RBP eCLIP21.36■■□□□ 1.01
CMC1-201ENST00000334841 LTBP4Q8N2S1 1624 aa21.36■■□□□ 1.01
CMC1-201ENST00000334841 CENPJQ9HC77 1338 aaPredicted RBP21.35■■□□□ 1.01
CMC1-201ENST00000334841 WAPLQ7Z5K2 1190 aa21.35■■□□□ 1.01
CMC1-201ENST00000334841 SIRT1Q96EB6 747 aa21.35■■□□□ 1.01
CMC1-201ENST00000334841 NALCNQ8IZF0 1738 aa21.35■■□□□ 1.01
CMC1-201ENST00000334841 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.35■■□□□ 1.01
CMC1-201ENST00000334841 LRRC7Q96NW7 1537 aa21.34■■□□□ 1.01
CMC1-201ENST00000334841 ST20-MTHFSA0A0A6YYL1 179 aa21.33■■□□□ 1.01
CMC1-201ENST00000334841 ADGRB2O60241 1585 aa21.32■■□□□ 1
CMC1-201ENST00000334841 SAFB2Q14151 953 aaKnown RBP eCLIP21.32■■□□□ 1
CMC1-201ENST00000334841 POGKQ9P215 609 aa21.32■■□□□ 1
CMC1-201ENST00000334841 SBNO2Q9Y2G9 1366 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms