RNA–Protein interactions for RNA: ENST00000334060.8_PAR_Y

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060_PAR_Y LMTK3Q96Q04 1460 aa23.84■■□□□ 1.41
SHOX-201ENST00000334060_PAR_Y SETD1BQ9UPS6 1966 aaKnown RBP23.84■■□□□ 1.41
SHOX-201ENST00000334060_PAR_Y ZFYVE9O95405 1425 aa23.83■■□□□ 1.41
SHOX-201ENST00000334060_PAR_Y RIMS2Q9UQ26 1411 aa23.82■■□□□ 1.4
SHOX-201ENST00000334060_PAR_Y TMEM2Q9UHN6 1383 aa23.81■■□□□ 1.4
SHOX-201ENST00000334060_PAR_Y PPP1R15AO75807 674 aaPredicted RBP23.81■■□□□ 1.4
SHOX-201ENST00000334060_PAR_Y NEURL4Q96JN8 1562 aa23.8■■□□□ 1.4
SHOX-201ENST00000334060_PAR_Y KDM5AP29375 1690 aaKnown RBP23.77■■□□□ 1.4
SHOX-201ENST00000334060_PAR_Y ARHGAP23Q9P227 1491 aa23.77■■□□□ 1.4
SHOX-201ENST00000334060_PAR_Y SLIT1O75093 1534 aa23.75■■□□□ 1.39
SHOX-201ENST00000334060_PAR_Y PRAG1Q86YV5 1406 aa23.75■■□□□ 1.39
SHOX-201ENST00000334060_PAR_Y NCKAP5LQ9HCH0 1330 aa23.74■■□□□ 1.39
SHOX-201ENST00000334060_PAR_Y THEMISQ8N1K5 641 aaPredicted RBP23.74■■□□□ 1.39
SHOX-201ENST00000334060_PAR_Y NBPF1Q3BBV0 1214 aa23.73■■□□□ 1.39
SHOX-201ENST00000334060_PAR_Y TXNDC2Q86VQ3 553 aa23.73■■□□□ 1.39
SHOX-201ENST00000334060_PAR_Y MYOM2P54296 1465 aa23.72■■□□□ 1.39
SHOX-201ENST00000334060_PAR_Y CFAP70Q5T0N1 1121 aa23.72■■□□□ 1.39
SHOX-201ENST00000334060_PAR_Y NRXN1Q9ULB1 1477 aa23.72■■□□□ 1.39
SHOX-201ENST00000334060_PAR_Y NRXN3Q9Y4C0 1643 aa23.71■■□□□ 1.39
SHOX-201ENST00000334060_PAR_Y PIK3C2GO75747 1445 aa23.71■■□□□ 1.39
SHOX-201ENST00000334060_PAR_Y IQGAP1P46940 1657 aa23.7■■□□□ 1.38
SHOX-201ENST00000334060_PAR_Y RPGRIP1LQ68CZ1 1315 aa23.69■■□□□ 1.38
SHOX-201ENST00000334060_PAR_Y TIMELESSQ9UNS1 1208 aa23.69■■□□□ 1.38
SHOX-201ENST00000334060_PAR_Y SCAF11Q99590 1463 aaKnown RBP23.68■■□□□ 1.38
SHOX-201ENST00000334060_PAR_Y SLC26A8Q96RN1 970 aa23.67■■□□□ 1.38
SHOX-201ENST00000334060_PAR_Y TMEM132EQ6IEE7 984 aa23.66■■□□□ 1.38
SHOX-201ENST00000334060_PAR_Y TRPM1Q7Z4N2 1603 aa23.66■■□□□ 1.38
SHOX-201ENST00000334060_PAR_Y ASXL1Q8IXJ9 1541 aa23.66■■□□□ 1.38
SHOX-201ENST00000334060_PAR_Y VGFO15240 615 aaPredicted RBP23.65■■□□□ 1.38
SHOX-201ENST00000334060_PAR_Y ADAMTS13Q76LX8 1427 aa23.64■■□□□ 1.38
SHOX-201ENST00000334060_PAR_Y STRCQ7RTU9 1775 aa23.64■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y ZEB1P37275 1124 aaPredicted RBP23.62■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y BCANQ96GW7 911 aa23.62■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y SETD1AO15047 1707 aaKnown RBP23.62■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y ANKLE2Q86XL3 938 aa23.61■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y HIRIP3Q9BW71 556 aaPredicted RBP23.61■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y EID1Q9Y6B2 187 aa23.61■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y ALKQ9UM73 1620 aa23.61■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y POLR1AO95602 1720 aaPredicted RBP23.61■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y METP08581 1390 aa23.61■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y PLEKHG1Q9ULL1 1385 aa23.6■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y ABCF1Q8NE71 845 aaKnown RBP eCLIP23.6■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y C14orf93Q9H972 538 aaKnown RBP23.59■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y RALGAPBQ86X10 1494 aa23.59■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y ADGRB1O14514 1584 aa23.58■■□□□ 1.37
SHOX-201ENST00000334060_PAR_Y ROCK2O75116 1388 aaKnown RBP23.57■■□□□ 1.36
SHOX-201ENST00000334060_PAR_Y NPHP4O75161 1426 aaPredicted RBP23.57■■□□□ 1.36
SHOX-201ENST00000334060_PAR_Y AEBP2Q6ZN18 517 aaPredicted RBP23.56■■□□□ 1.36
SHOX-201ENST00000334060_PAR_Y MED14O60244 1454 aa23.55■■□□□ 1.36
SHOX-201ENST00000334060_PAR_Y PTPRUQ92729 1446 aa23.54■■□□□ 1.36
SHOX-201ENST00000334060_PAR_Y PELP1Q8IZL8 1130 aaKnown RBP23.53■■□□□ 1.36
SHOX-201ENST00000334060_PAR_Y STK26Q9P289 416 aa23.53■■□□□ 1.36
SHOX-201ENST00000334060_PAR_Y CARD11Q9BXL7 1154 aa23.52■■□□□ 1.36
SHOX-201ENST00000334060_PAR_Y HDGFP51858 240 aaKnown RBP23.51■■□□□ 1.35
SHOX-201ENST00000334060_PAR_Y KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
SHOX-201ENST00000334060_PAR_Y TRAK1Q9UPV9 953 aa23.49■■□□□ 1.35
SHOX-201ENST00000334060_PAR_Y GPRASP1Q5JY77 1395 aa23.49■■□□□ 1.35
SHOX-201ENST00000334060_PAR_Y STAC3Q96MF2 364 aa23.49■■□□□ 1.35
SHOX-201ENST00000334060_PAR_Y RBM33Q96EV2 1170 aaKnown RBP23.48■■□□□ 1.35
SHOX-201ENST00000334060_PAR_Y LAMC1P11047 1609 aa23.46■■□□□ 1.35
SHOX-201ENST00000334060_PAR_Y YTHDC2Q9H6S0 1430 aaKnown RBP23.45■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y PLEKHH1Q9ULM0 1364 aa23.45■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y USP47Q96K76 1375 aa23.44■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y HSPA5P11021 654 aaKnown RBP23.44■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y SAFB2Q14151 953 aaKnown RBP eCLIP23.44■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y TBX22Q9Y458 520 aa23.44■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y STRCP1A6NGW2 1772 aa23.43■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y WAPLQ7Z5K2 1190 aa23.42■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y KCNA6P17658 529 aa23.41■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y ROBO2Q9HCK4 1378 aa23.41■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y ST20-MTHFSA0A0A6YYL1 179 aa23.4■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y AMOTL2Q9Y2J4 779 aa23.4■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y ARHGEF28Q8N1W1 1705 aaKnown RBP23.4■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y ZNF335Q9H4Z2 1342 aaPredicted RBP23.39■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y DIP2AQ14689 1571 aa23.39■■□□□ 1.34
SHOX-201ENST00000334060_PAR_Y LRPPRCP42704 1394 aaKnown RBP23.38■■□□□ 1.33
SHOX-201ENST00000334060_PAR_Y XRN1Q8IZH2 1706 aaKnown RBP23.37■■□□□ 1.33
SHOX-201ENST00000334060_PAR_Y PRAM1Q96QH2 718 aa23.36■■□□□ 1.33
SHOX-201ENST00000334060_PAR_Y CHD2O14647 1828 aaKnown RBP23.36■■□□□ 1.33
SHOX-201ENST00000334060_PAR_Y C11orf95C9JLR9 678 aaPredicted RBP23.36■■□□□ 1.33
SHOX-201ENST00000334060_PAR_Y EIF4G2P78344 907 aaKnown RBP eCLIP23.33■■□□□ 1.33
SHOX-201ENST00000334060_PAR_Y ABCC11Q96J66 1382 aa23.33■■□□□ 1.33
SHOX-201ENST00000334060_PAR_Y TESK2Q96S53 571 aa23.32■■□□□ 1.32
SHOX-201ENST00000334060_PAR_Y CPS1P31327 1500 aa23.32■■□□□ 1.32
SHOX-201ENST00000334060_PAR_Y TECPR2O15040 1411 aa23.31■■□□□ 1.32
SHOX-201ENST00000334060_PAR_Y KNDC1Q76NI1 1749 aa23.3■■□□□ 1.32
SHOX-201ENST00000334060_PAR_Y MINK1Q8N4C8 1332 aaPredicted RBP23.3■■□□□ 1.32
SHOX-201ENST00000334060_PAR_Y NWD1Q149M9 1564 aa23.29■■□□□ 1.32
SHOX-201ENST00000334060_PAR_Y SIPA1L2Q9P2F8 1722 aaPredicted RBP23.29■■□□□ 1.32
SHOX-201ENST00000334060_PAR_Y QRICH2Q9H0J4 1663 aa23.29■■□□□ 1.32
SHOX-201ENST00000334060_PAR_Y CENPJQ9HC77 1338 aaPredicted RBP23.28■■□□□ 1.32
SHOX-201ENST00000334060_PAR_Y DISP3Q9P2K9 1392 aa23.27■■□□□ 1.32
SHOX-201ENST00000334060_PAR_Y PIK3R4Q99570 1358 aa23.27■■□□□ 1.32
SHOX-201ENST00000334060_PAR_Y DLC1Q96QB1 1528 aa23.26■■□□□ 1.31
SHOX-201ENST00000334060_PAR_Y POGKQ9P215 609 aa23.25■■□□□ 1.31
SHOX-201ENST00000334060_PAR_Y PTCH1Q13635 1447 aa23.24■■□□□ 1.31
SHOX-201ENST00000334060_PAR_Y TULP4Q9NRJ4 1543 aa23.23■■□□□ 1.31
SHOX-201ENST00000334060_PAR_Y NALCNQ8IZF0 1738 aa23.21■■□□□ 1.31
SHOX-201ENST00000334060_PAR_Y XIRP1Q702N8 1843 aaKnown RBP23.2■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms