RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 TIAM1Q13009 1591 aa8.17□□□□□ -1.1
CPEB4-202ENST00000334035 EHBP1L1Q8N3D4 1523 aa8.17□□□□□ -1.1
CPEB4-202ENST00000334035 ATAD2BQ9ULI0 1458 aa8.16□□□□□ -1.1
CPEB4-202ENST00000334035 CDC45O75419 566 aa8.16□□□□□ -1.1
CPEB4-202ENST00000334035 RABEP1Q15276 862 aa8.16□□□□□ -1.1
CPEB4-202ENST00000334035 TERF2IPQ9NYB0 399 aa8.16□□□□□ -1.1
CPEB4-202ENST00000334035 CCDC70Q6NSX1 233 aa8.16□□□□□ -1.1
CPEB4-202ENST00000334035 ZSCAN30Q86W11 494 aa8.16□□□□□ -1.1
CPEB4-202ENST00000334035 PLIN1O60240 522 aa8.15□□□□□ -1.1
CPEB4-202ENST00000334035 API5Q9BZZ5 524 aaKnown RBP8.15□□□□□ -1.1
CPEB4-202ENST00000334035 RNF20Q5VTR2 975 aa8.15□□□□□ -1.1
CPEB4-202ENST00000334035 RTF1Q92541 710 aaKnown RBP8.15□□□□□ -1.1
CPEB4-202ENST00000334035 TSPY26PQ9H489 355 aa8.15□□□□□ -1.11
CPEB4-202ENST00000334035 PDIA4P13667 645 aaKnown RBP8.14□□□□□ -1.11
CPEB4-202ENST00000334035 RUNDC1Q96C34 613 aa8.14□□□□□ -1.11
CPEB4-202ENST00000334035 WDR97A6NE52 1622 aa8.14□□□□□ -1.11
CPEB4-202ENST00000334035 SPAG9O60271 1321 aaKnown RBP8.14□□□□□ -1.11
CPEB4-202ENST00000334035 HDGFP51858 240 aaKnown RBP8.14□□□□□ -1.11
CPEB4-202ENST00000334035 GNL2Q13823 731 aaKnown RBP8.14□□□□□ -1.11
CPEB4-202ENST00000334035 FAM184AQ8NB25 1140 aa8.14□□□□□ -1.11
CPEB4-202ENST00000334035 STK31Q9BXU1 1019 aa8.14□□□□□ -1.11
CPEB4-202ENST00000334035 COG6Q9Y2V7 657 aa8.14□□□□□ -1.11
CPEB4-202ENST00000334035 CCDC146Q8IYE0 955 aa8.14□□□□□ -1.11
CPEB4-202ENST00000334035 AKNAQ7Z591 1439 aa8.14□□□□□ -1.11
CPEB4-202ENST00000334035 MCM4P33991 863 aa8.14□□□□□ -1.11
CPEB4-202ENST00000334035 C14orf37Q86TY3 774 aa8.14□□□□□ -1.11
CPEB4-202ENST00000334035 PRXQ9BXM0 1461 aa8.14□□□□□ -1.11
CPEB4-202ENST00000334035 NCOA2Q15596 1464 aa8.13□□□□□ -1.11
CPEB4-202ENST00000334035 BECN2A8MW95 431 aa8.13□□□□□ -1.11
CPEB4-202ENST00000334035 RUFY2Q8WXA3 655 aa8.13□□□□□ -1.11
CPEB4-202ENST00000334035 DHX29Q7Z478 1369 aaKnown RBP8.13□□□□□ -1.11
CPEB4-202ENST00000334035 PDS5BQ9NTI5 1447 aa8.13□□□□□ -1.11
CPEB4-202ENST00000334035 A0A0G2JS52 829 aa8.13□□□□□ -1.11
CPEB4-202ENST00000334035 APBB1O00213 710 aa8.13□□□□□ -1.11
CPEB4-202ENST00000334035 ERCC4Q92889 916 aaPredicted RBP8.13□□□□□ -1.11
CPEB4-202ENST00000334035 ANKRD45Q5TZF3 282 aa8.12□□□□□ -1.11
CPEB4-202ENST00000334035 PNISRQ8TF01 805 aaKnown RBP8.12□□□□□ -1.11
CPEB4-202ENST00000334035 CADPSQ9ULU8 1353 aa8.12□□□□□ -1.11
CPEB4-202ENST00000334035 SASS6Q6UVJ0 657 aa8.12□□□□□ -1.11
CPEB4-202ENST00000334035 GCC1Q96CN9 775 aa8.12□□□□□ -1.11
CPEB4-202ENST00000334035 TPM1P09493 284 aa8.12□□□□□ -1.11
CPEB4-202ENST00000334035 MCTP1Q6DN14 999 aa8.12□□□□□ -1.11
CPEB4-202ENST00000334035 CLCN1P35523 988 aa8.12□□□□□ -1.11
CPEB4-202ENST00000334035 SRPK2P78362 688 aaKnown RBP8.11□□□□□ -1.11
CPEB4-202ENST00000334035 TRIM6-TRIM34B2RNG4 842 aa8.11□□□□□ -1.11
CPEB4-202ENST00000334035 UQCRHLA0A096LP55 91 aa8.11□□□□□ -1.11
CPEB4-202ENST00000334035 UQCRHP07919 91 aa8.11□□□□□ -1.11
CPEB4-202ENST00000334035 NAT10Q9H0A0 1025 aaKnown RBP8.11□□□□□ -1.11
CPEB4-202ENST00000334035 AQRO60306 1485 aaKnown RBP eCLIP8.11□□□□□ -1.113e-6■■■■■ 29.7
CPEB4-202ENST00000334035 TOP2BQ02880 1626 aa8.11□□□□□ -1.11
CPEB4-202ENST00000334035 TAOK2Q9UL54 1235 aa8.1□□□□□ -1.11
CPEB4-202ENST00000334035 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.1□□□□□ -1.11
CPEB4-202ENST00000334035 IGF1RP08069 1367 aa8.1□□□□□ -1.11
CPEB4-202ENST00000334035 NOC3LQ8WTT2 800 aaKnown RBP8.1□□□□□ -1.11
CPEB4-202ENST00000334035 HSP90B1P14625 803 aaKnown RBP8.09□□□□□ -1.11
CPEB4-202ENST00000334035 HOOK1Q9UJC3 728 aaKnown RBP8.09□□□□□ -1.11
CPEB4-202ENST00000334035 K7ELQ4 463 aaPredicted RBP8.09□□□□□ -1.11
CPEB4-202ENST00000334035 MNS1Q8NEH6 495 aa8.09□□□□□ -1.11
CPEB4-202ENST00000334035 KIF2AO00139 706 aaPredicted RBP8.09□□□□□ -1.11
CPEB4-202ENST00000334035 DYNC1I1O14576 645 aa8.09□□□□□ -1.11
CPEB4-202ENST00000334035 AK7Q96M32 723 aa8.09□□□□□ -1.11
CPEB4-202ENST00000334035 FGD5Q6ZNL6 1462 aa8.09□□□□□ -1.11
CPEB4-202ENST00000334035 APAF1O14727 1248 aa8.09□□□□□ -1.11
CPEB4-202ENST00000334035 IFT57Q9NWB7 429 aa8.09□□□□□ -1.11
CPEB4-202ENST00000334035 KIAA1107Q9UPP5 1409 aa8.09□□□□□ -1.11
CPEB4-202ENST00000334035 SENP3Q9H4L4 574 aaPredicted RBP8.09□□□□□ -1.11
CPEB4-202ENST00000334035 H3BQV1 296 aa8.08□□□□□ -1.12
CPEB4-202ENST00000334035 ZKSCAN1P17029 563 aaPredicted RBP8.08□□□□□ -1.12
CPEB4-202ENST00000334035 HSP90B2PQ58FF3 399 aa8.08□□□□□ -1.12
CPEB4-202ENST00000334035 IFFO2Q5TF58 517 aa8.08□□□□□ -1.12
CPEB4-202ENST00000334035 ERCC6Q03468 1493 aa8.08□□□□□ -1.12
CPEB4-202ENST00000334035 EFCAB2Q5VUJ9 269 aa8.08□□□□□ -1.12
CPEB4-202ENST00000334035 NOL8Q76FK4 1167 aaKnown RBP8.08□□□□□ -1.12
CPEB4-202ENST00000334035 POLA1P09884 1462 aaPredicted RBP8.08□□□□□ -1.12
CPEB4-202ENST00000334035 FOXD4L5Q5VV16 416 aaPredicted RBP8.08□□□□□ -1.12
CPEB4-202ENST00000334035 FOXD4L4Q8WXT5 416 aaPredicted RBP8.08□□□□□ -1.12
CPEB4-202ENST00000334035 CDR1P51861 262 aa8.08□□□□□ -1.12
CPEB4-202ENST00000334035 PLEKHH1Q9ULM0 1364 aa8.08□□□□□ -1.12
CPEB4-202ENST00000334035 NCOA1Q15788 1441 aa8.08□□□□□ -1.12
CPEB4-202ENST00000334035 HS1BP3Q53T59 392 aa8.07□□□□□ -1.12
CPEB4-202ENST00000334035 WDR63Q8IWG1 891 aa8.07□□□□□ -1.12
CPEB4-202ENST00000334035 PDZRN3Q9UPQ7 1066 aa8.07□□□□□ -1.12
CPEB4-202ENST00000334035 TSR1Q2NL82 804 aaKnown RBP8.07□□□□□ -1.12
CPEB4-202ENST00000334035 USP8P40818 1118 aa8.07□□□□□ -1.12
CPEB4-202ENST00000334035 HSP90AB4PQ58FF6 505 aa8.07□□□□□ -1.12
CPEB4-202ENST00000334035 SMC3Q9UQE7 1217 aa8.07□□□□□ -1.12
CPEB4-202ENST00000334035 SF3A1Q15459 793 aaKnown RBP8.07□□□□□ -1.12
CPEB4-202ENST00000334035 SYNJ1O43426 1573 aa8.07□□□□□ -1.12
CPEB4-202ENST00000334035 EVC2Q86UK5 1308 aa8.07□□□□□ -1.12
CPEB4-202ENST00000334035 ZNF428Q96B54 188 aa8.07□□□□□ -1.12
CPEB4-202ENST00000334035 PRIMPOLQ96LW4 560 aa8.07□□□□□ -1.12
CPEB4-202ENST00000334035 GNAI1P63096 354 aa8.06□□□□□ -1.12
CPEB4-202ENST00000334035 SUPT6HQ7KZ85 1726 aaKnown RBP8.06□□□□□ -1.12
CPEB4-202ENST00000334035 LRRFIP1Q32MZ4 808 aaKnown RBP8.06□□□□□ -1.12
CPEB4-202ENST00000334035 LEKR1Q6ZMV7 388 aa8.06□□□□□ -1.12
CPEB4-202ENST00000334035 AEBP1Q8IUX7 1158 aa8.06□□□□□ -1.12
CPEB4-202ENST00000334035 ZNF592Q92610 1267 aa8.06□□□□□ -1.12
CPEB4-202ENST00000334035 PLEKHG5O94827 1062 aa8.06□□□□□ -1.12
CPEB4-202ENST00000334035 TPD52L1Q16890 204 aaPredicted RBP8.06□□□□□ -1.12
CPEB4-202ENST00000334035 HOMER1Q86YM7 354 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms