RNA–Protein interactions for RNA: ENST00000332904.7

CDHR1-201, Transcript of cadherin related family member 1, humanhuman

TSL 1 (best) BASIC

Gene CDHR1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-201ENST00000332904 TROQ12816 1431 aaPredicted RBP23.03■■□□□ 1.28
CDHR1-201ENST00000332904 MAGI2Q86UL8 1455 aa23.03■■□□□ 1.28
CDHR1-201ENST00000332904 MYH16Q9H6N6 1097 aa23.02■■□□□ 1.28
CDHR1-201ENST00000332904 CGNL1Q0VF96 1302 aa23.02■■□□□ 1.28
CDHR1-201ENST00000332904 TNNQ9UQP3 1299 aa23.02■■□□□ 1.28
CDHR1-201ENST00000332904 C9orf84Q5VXU9 1444 aa23.02■■□□□ 1.28
CDHR1-201ENST00000332904 MRE11P49959 708 aa23.01■■□□□ 1.27
CDHR1-201ENST00000332904 GRPEL1Q9HAV7 217 aa23.01■■□□□ 1.27
CDHR1-201ENST00000332904 AMER1Q5JTC6 1135 aaPredicted RBP23.01■■□□□ 1.27
CDHR1-201ENST00000332904 PCDHB15Q9Y5E8 787 aa23■■□□□ 1.27
CDHR1-201ENST00000332904 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
CDHR1-201ENST00000332904 PDZRN3Q9UPQ7 1066 aa22.99■■□□□ 1.27
CDHR1-201ENST00000332904 GPRASP1Q5JY77 1395 aa22.99■■□□□ 1.27
CDHR1-201ENST00000332904 RAPGEF6Q8TEU7 1601 aa22.98■■□□□ 1.27
CDHR1-201ENST00000332904 DISP1Q96F81 1524 aa22.97■■□□□ 1.27
CDHR1-201ENST00000332904 TSPY4P0CV99 314 aa22.97■■□□□ 1.27
CDHR1-201ENST00000332904 TSPY10P0CW01 314 aa22.97■■□□□ 1.27
CDHR1-201ENST00000332904 PDE3AQ14432 1141 aa22.97■■□□□ 1.27
CDHR1-201ENST00000332904 ITSN2Q9NZM3 1697 aa22.97■■□□□ 1.27
CDHR1-201ENST00000332904 A2MP01023 1474 aa22.97■■□□□ 1.27
CDHR1-201ENST00000332904 CENPJQ9HC77 1338 aaPredicted RBP22.96■■□□□ 1.27
CDHR1-201ENST00000332904 E9PSI1 815 aa22.96■■□□□ 1.27
CDHR1-201ENST00000332904 HNRNPMP52272 730 aaKnown RBP eCLIP22.96■■□□□ 1.27
CDHR1-201ENST00000332904 PRDM15P57071 1507 aaPredicted RBP22.95■■□□□ 1.27
CDHR1-201ENST00000332904 RLBP1P12271 317 aa22.95■■□□□ 1.26
CDHR1-201ENST00000332904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.95■■□□□ 1.26
CDHR1-201ENST00000332904 CHMP5Q9NZZ3 219 aa22.95■■□□□ 1.26
CDHR1-201ENST00000332904 BCL2L13Q9BXK5 485 aa22.95■■□□□ 1.26
CDHR1-201ENST00000332904 WDR7Q9Y4E6 1490 aa22.94■■□□□ 1.26
CDHR1-201ENST00000332904 MFAP1P55081 439 aaKnown RBP22.94■■□□□ 1.26
CDHR1-201ENST00000332904 EIF4G3O43432 1585 aaKnown RBP22.94■■□□□ 1.26
CDHR1-201ENST00000332904 GAS2L3Q86XJ1 694 aa22.93■■□□□ 1.26
CDHR1-201ENST00000332904 KIAA0556O60303 1618 aa22.92■■□□□ 1.26
CDHR1-201ENST00000332904 PTPRGP23470 1445 aa22.92■■□□□ 1.26
CDHR1-201ENST00000332904 NEUROD2Q15784 382 aa22.92■■□□□ 1.26
CDHR1-201ENST00000332904 TRIM44Q96DX7 344 aaPredicted RBP22.92■■□□□ 1.26
CDHR1-201ENST00000332904 PLB1Q6P1J6 1458 aa22.91■■□□□ 1.26
CDHR1-201ENST00000332904 PBRM1Q86U86 1689 aa22.91■■□□□ 1.26
CDHR1-201ENST00000332904 TARBP1Q13395 1621 aaKnown RBP22.91■■□□□ 1.26
CDHR1-201ENST00000332904 C22orf23Q9BZE7 217 aa22.9■■□□□ 1.26
CDHR1-201ENST00000332904 CLASP1Q7Z460 1538 aa22.9■■□□□ 1.26
CDHR1-201ENST00000332904 FAM135AQ9P2D6 1515 aa22.9■■□□□ 1.26
CDHR1-201ENST00000332904 ADAMTS12P58397 1594 aa22.89■■□□□ 1.26
CDHR1-201ENST00000332904 CDC42BPAQ5VT25 1732 aa22.89■■□□□ 1.25
CDHR1-201ENST00000332904 PLA2R1Q13018 1463 aa22.88■■□□□ 1.25
CDHR1-201ENST00000332904 PMFBP1Q8TBY8 1022 aa22.88■■□□□ 1.25
CDHR1-201ENST00000332904 RRP7AQ9Y3A4 280 aaKnown RBP22.87■■□□□ 1.25
CDHR1-201ENST00000332904 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
CDHR1-201ENST00000332904 ZNF692Q9BU19 519 aaPredicted RBP22.85■■□□□ 1.25
CDHR1-201ENST00000332904 WWC1Q8IX03 1113 aa22.85■■□□□ 1.25
CDHR1-201ENST00000332904 RTEL1-TNFRSF6BF6WH68 1400 aa22.85■■□□□ 1.25
CDHR1-201ENST00000332904 KIAA1211Q6ZU35 1233 aa22.85■■□□□ 1.25
CDHR1-201ENST00000332904 DDX11L8A8MPP1 907 aa22.84■■□□□ 1.25
CDHR1-201ENST00000332904 PIK3C2GO75747 1445 aa22.83■■□□□ 1.25
CDHR1-201ENST00000332904 RARSP54136 660 aaKnown RBP22.83■■□□□ 1.24
CDHR1-201ENST00000332904 ABCC10Q5T3U5 1492 aa22.81■■□□□ 1.24
CDHR1-201ENST00000332904 RBM10P98175 930 aaKnown RBP22.81■■□□□ 1.24
CDHR1-201ENST00000332904 HSCBQ8IWL3 235 aa22.81■■□□□ 1.24
CDHR1-201ENST00000332904 TNPO1Q92973 898 aaKnown RBP22.81■■□□□ 1.24
CDHR1-201ENST00000332904 PDCL3Q9H2J4 239 aa22.81■■□□□ 1.24
CDHR1-201ENST00000332904 SHANK2Q9UPX8 1470 aa22.8■■□□□ 1.24
CDHR1-201ENST00000332904 TPM2P07951 284 aa22.8■■□□□ 1.24
CDHR1-201ENST00000332904 ASXL1Q8IXJ9 1541 aa22.79■■□□□ 1.24
CDHR1-201ENST00000332904 ABCC2Q92887 1545 aa22.79■■□□□ 1.24
CDHR1-201ENST00000332904 RWDD1Q9H446 243 aaPredicted RBP22.79■■□□□ 1.24
CDHR1-201ENST00000332904 MYO5CQ9NQX4 1742 aa22.79■■□□□ 1.24
CDHR1-201ENST00000332904 FOXD4L1Q9NU39 408 aa22.78■■□□□ 1.24
CDHR1-201ENST00000332904 LAMC1P11047 1609 aa22.78■■□□□ 1.24
CDHR1-201ENST00000332904 NINLQ9Y2I6 1382 aa22.77■■□□□ 1.24
CDHR1-201ENST00000332904 PLEKHD1A6NEE1 506 aa22.76■■□□□ 1.23
CDHR1-201ENST00000332904 DDIT3P35638 169 aa22.73■■□□□ 1.23
CDHR1-201ENST00000332904 CCDC141Q6ZP82 1450 aa22.73■■□□□ 1.23
CDHR1-201ENST00000332904 TNNT2P45379 298 aaPredicted RBP22.73■■□□□ 1.23
CDHR1-201ENST00000332904 DNAJC5BQ9UF47 199 aa22.73■■□□□ 1.23
CDHR1-201ENST00000332904 ISY1Q9ULR0 285 aaKnown RBP22.73■■□□□ 1.23
CDHR1-201ENST00000332904 ARID3AQ99856 593 aa22.72■■□□□ 1.23
CDHR1-201ENST00000332904 RIPK4P57078 832 aa22.72■■□□□ 1.23
CDHR1-201ENST00000332904 EIF2AK4Q9P2K8 1649 aaKnown RBP22.7■■□□□ 1.23
CDHR1-201ENST00000332904 ZMYM3Q14202 1370 aa22.7■■□□□ 1.22
CDHR1-201ENST00000332904 FAM13BQ9NYF5 915 aa22.69■■□□□ 1.22
CDHR1-201ENST00000332904 PODXL2Q9NZ53 605 aa22.69■■□□□ 1.22
CDHR1-201ENST00000332904 HSP90AB1P08238 724 aaKnown RBP22.68■■□□□ 1.22
CDHR1-201ENST00000332904 NASPP49321 788 aaPredicted RBP22.68■■□□□ 1.22
CDHR1-201ENST00000332904 CARD14Q9BXL6 1004 aa22.68■■□□□ 1.22
CDHR1-201ENST00000332904 PLXNC1O60486 1568 aa22.68■■□□□ 1.22
CDHR1-201ENST00000332904 SYNMO15061 1565 aa22.68■■□□□ 1.22
CDHR1-201ENST00000332904 NCOA3Q9Y6Q9 1424 aa22.67■■□□□ 1.22
CDHR1-201ENST00000332904 PLEKHG5O94827 1062 aa22.67■■□□□ 1.22
CDHR1-201ENST00000332904 MVPQ14764 893 aaKnown RBP22.67■■□□□ 1.22
CDHR1-201ENST00000332904 CDCA8Q53HL2 280 aa22.67■■□□□ 1.22
CDHR1-201ENST00000332904 ZSCAN30Q86W11 494 aa22.67■■□□□ 1.22
CDHR1-201ENST00000332904 GBP4Q96PP9 640 aa22.67■■□□□ 1.22
CDHR1-201ENST00000332904 SYNJ2O15056 1496 aa22.67■■□□□ 1.22
CDHR1-201ENST00000332904 CD2BP2O95400 341 aaKnown RBP22.66■■□□□ 1.22
CDHR1-201ENST00000332904 TCP11L2Q8N4U5 519 aa22.66■■□□□ 1.22
CDHR1-201ENST00000332904 PRDM4Q9UKN5 801 aa22.66■■□□□ 1.22
CDHR1-201ENST00000332904 NUP160Q12769 1436 aa22.66■■□□□ 1.22
CDHR1-201ENST00000332904 OFD1O75665 1012 aa22.65■■□□□ 1.22
CDHR1-201ENST00000332904 RAB3GAP1Q15042 981 aa22.65■■□□□ 1.22
CDHR1-201ENST00000332904 FTSJ3Q8IY81 847 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms