RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 ADGRB3O60242 1522 aa12.46□□□□□ -0.41
SIMC1-201ENST00000332772 NRXN1Q9ULB1 1477 aa12.46□□□□□ -0.41
SIMC1-201ENST00000332772 NPATQ14207 1427 aa12.46□□□□□ -0.41
SIMC1-201ENST00000332772 FAM69CQ0P6D2 419 aa12.46□□□□□ -0.42
SIMC1-201ENST00000332772 AGLP35573 1532 aa12.46□□□□□ -0.42
SIMC1-201ENST00000332772 NOS1P29475 1434 aa12.45□□□□□ -0.42
SIMC1-201ENST00000332772 RAPGEF3O95398 923 aa12.45□□□□□ -0.42
SIMC1-201ENST00000332772 COL17A1Q9UMD9 1497 aaPredicted RBP12.45□□□□□ -0.42
SIMC1-201ENST00000332772 RPGRIP1LQ68CZ1 1315 aa12.45□□□□□ -0.42
SIMC1-201ENST00000332772 PIK3C2BO00750 1634 aa12.44□□□□□ -0.42
SIMC1-201ENST00000332772 SCAF11Q99590 1463 aaKnown RBP12.44□□□□□ -0.42
SIMC1-201ENST00000332772 NBPF1Q3BBV0 1214 aa12.44□□□□□ -0.42
SIMC1-201ENST00000332772 WASHC2CQ9Y4E1 1318 aa12.43□□□□□ -0.42
SIMC1-201ENST00000332772 PPLO60437 1756 aa12.42□□□□□ -0.42
SIMC1-201ENST00000332772 SETBP1Q9Y6X0 1596 aa12.42□□□□□ -0.42
SIMC1-201ENST00000332772 KIF13AQ9H1H9 1805 aa12.42□□□□□ -0.42
SIMC1-201ENST00000332772 MROH2AA6NES4 1674 aa12.42□□□□□ -0.42
SIMC1-201ENST00000332772 TESK2Q96S53 571 aa12.42□□□□□ -0.42
SIMC1-201ENST00000332772 EIF3AQ14152 1382 aaKnown RBP12.42□□□□□ -0.42
SIMC1-201ENST00000332772 GGT6Q6P531 493 aa12.41□□□□□ -0.42
SIMC1-201ENST00000332772 YEATS2Q9ULM3 1422 aa12.41□□□□□ -0.42
SIMC1-201ENST00000332772 TMF1P82094 1093 aa12.4□□□□□ -0.42
SIMC1-201ENST00000332772 CDCA8Q53HL2 280 aa12.4□□□□□ -0.42
SIMC1-201ENST00000332772 TSPOAP1O95153 1857 aa12.39□□□□□ -0.43
SIMC1-201ENST00000332772 UGGT1Q9NYU2 1555 aa12.39□□□□□ -0.43
SIMC1-201ENST00000332772 SIGLEC1Q9BZZ2 1709 aa12.39□□□□□ -0.43
SIMC1-201ENST00000332772 MYO3AQ8NEV4 1616 aa12.38□□□□□ -0.43
SIMC1-201ENST00000332772 RALBP1Q15311 655 aa12.38□□□□□ -0.43
SIMC1-201ENST00000332772 SLC52A1Q9NWF4 448 aa12.38□□□□□ -0.43
SIMC1-201ENST00000332772 SYNMO15061 1565 aa12.38□□□□□ -0.43
SIMC1-201ENST00000332772 NCBP3Q53F19 620 aaKnown RBP12.38□□□□□ -0.43
SIMC1-201ENST00000332772 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
SIMC1-201ENST00000332772 PREX1Q8TCU6 1659 aa12.37□□□□□ -0.43
SIMC1-201ENST00000332772 SBNO2Q9Y2G9 1366 aa12.37□□□□□ -0.43
SIMC1-201ENST00000332772 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
SIMC1-201ENST00000332772 CFAP65Q6ZU64 1925 aaKnown RBP12.35□□□□□ -0.43
SIMC1-201ENST00000332772 ARHGEF40Q8TER5 1519 aa12.35□□□□□ -0.43
SIMC1-201ENST00000332772 MRS2Q9HD23 443 aa12.34□□□□□ -0.43
SIMC1-201ENST00000332772 BRD4O60885 1362 aaPredicted RBP12.34□□□□□ -0.43
SIMC1-201ENST00000332772 DISP3Q9P2K9 1392 aa12.34□□□□□ -0.43
SIMC1-201ENST00000332772 VGFO15240 615 aaPredicted RBP12.33□□□□□ -0.44
SIMC1-201ENST00000332772 PER1O15534 1290 aaPredicted RBP12.33□□□□□ -0.44
SIMC1-201ENST00000332772 C14orf93Q9H972 538 aaKnown RBP12.33□□□□□ -0.44
SIMC1-201ENST00000332772 ADGRF5Q8IZF2 1346 aa12.33□□□□□ -0.44
SIMC1-201ENST00000332772 NEXMIFQ5QGS0 1516 aa12.33□□□□□ -0.44
SIMC1-201ENST00000332772 POLR3GLQ9BT43 218 aa12.32□□□□□ -0.44
SIMC1-201ENST00000332772 MYBBP1AQ9BQG0 1328 aaKnown RBP12.32□□□□□ -0.44
SIMC1-201ENST00000332772 PARD3Q8TEW0 1356 aa12.32□□□□□ -0.44
SIMC1-201ENST00000332772 KDM5AP29375 1690 aaKnown RBP12.32□□□□□ -0.44
SIMC1-201ENST00000332772 TMEM131LA2VDJ0 1609 aa12.31□□□□□ -0.44
SIMC1-201ENST00000332772 ADGRB1O14514 1584 aa12.31□□□□□ -0.44
SIMC1-201ENST00000332772 INSRP06213 1382 aa12.31□□□□□ -0.44
SIMC1-201ENST00000332772 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
SIMC1-201ENST00000332772 SPATA31D1Q6ZQQ2 1576 aa12.3□□□□□ -0.44
SIMC1-201ENST00000332772 ERVK-7P63135 1459 aa12.3□□□□□ -0.44
SIMC1-201ENST00000332772 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
SIMC1-201ENST00000332772 PUS7Q96PZ0 661 aaKnown RBP12.29□□□□□ -0.44
SIMC1-201ENST00000332772 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
SIMC1-201ENST00000332772 HNRNPUQ00839 825 aaKnown RBP eCLIP12.29□□□□□ -0.44
SIMC1-201ENST00000332772 CCDC184Q52MB2 194 aa12.29□□□□□ -0.44
SIMC1-201ENST00000332772 MYOM1P52179 1685 aa12.28□□□□□ -0.44
SIMC1-201ENST00000332772 IDI1Q13907 227 aa12.27□□□□□ -0.44
SIMC1-201ENST00000332772 NLRP13Q86W25 1043 aa12.27□□□□□ -0.44
SIMC1-201ENST00000332772 CLTCQ00610 1675 aaKnown RBP12.27□□□□□ -0.45
SIMC1-201ENST00000332772 CHGAP10645 457 aaKnown RBP12.27□□□□□ -0.45
SIMC1-201ENST00000332772 LRPPRCP42704 1394 aaKnown RBP12.26□□□□□ -0.45
SIMC1-201ENST00000332772 PNISRQ8TF01 805 aaKnown RBP12.26□□□□□ -0.45
SIMC1-201ENST00000332772 PANK3Q9H999 370 aa12.26□□□□□ -0.45
SIMC1-201ENST00000332772 TMC1Q8TDI8 760 aa12.25□□□□□ -0.45
SIMC1-201ENST00000332772 MYO5BQ9ULV0 1848 aa12.25□□□□□ -0.45
SIMC1-201ENST00000332772 CENPJQ9HC77 1338 aaPredicted RBP12.25□□□□□ -0.45
SIMC1-201ENST00000332772 QRICH2Q9H0J4 1663 aa12.24□□□□□ -0.45
SIMC1-201ENST00000332772 FAM9BQ8IZU0 186 aa12.24□□□□□ -0.45
SIMC1-201ENST00000332772 ASXL1Q8IXJ9 1541 aa12.23□□□□□ -0.45
SIMC1-201ENST00000332772 ARHGEF28Q8N1W1 1705 aaKnown RBP12.23□□□□□ -0.45
SIMC1-201ENST00000332772 KNSTRNQ9Y448 316 aa12.22□□□□□ -0.45
SIMC1-201ENST00000332772 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
SIMC1-201ENST00000332772 NEFLP07196 543 aa12.2□□□□□ -0.46
SIMC1-201ENST00000332772 ERICH6BQ5W0A0 696 aa12.2□□□□□ -0.46
SIMC1-201ENST00000332772 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
SIMC1-201ENST00000332772 A2ML1A8K2U0 1454 aa12.19□□□□□ -0.46
SIMC1-201ENST00000332772 USP32Q8NFA0 1604 aa12.19□□□□□ -0.46
SIMC1-201ENST00000332772 NINLQ9Y2I6 1382 aa12.18□□□□□ -0.46
SIMC1-201ENST00000332772 ZMYM3Q14202 1370 aa12.18□□□□□ -0.46
SIMC1-201ENST00000332772 DLC1Q96QB1 1528 aa12.17□□□□□ -0.46
SIMC1-201ENST00000332772 FBXO31Q5XUX0 539 aaPredicted RBP12.17□□□□□ -0.46
SIMC1-201ENST00000332772 ESF1Q9H501 851 aaKnown RBP12.17□□□□□ -0.46
SIMC1-201ENST00000332772 ALKQ9UM73 1620 aa12.17□□□□□ -0.46
SIMC1-201ENST00000332772 SMG6Q86US8 1419 aaKnown RBP12.17□□□□□ -0.46
SIMC1-201ENST00000332772 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
SIMC1-201ENST00000332772 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.17□□□□□ -0.46
SIMC1-201ENST00000332772 EVC2Q86UK5 1308 aa12.16□□□□□ -0.46
SIMC1-201ENST00000332772 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
SIMC1-201ENST00000332772 TRAK1Q9UPV9 953 aa12.16□□□□□ -0.46
SIMC1-201ENST00000332772 CC2D1BQ5T0F9 858 aaKnown RBP12.14□□□□□ -0.47
SIMC1-201ENST00000332772 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
SIMC1-201ENST00000332772 BLMP54132 1417 aaPredicted RBP12.14□□□□□ -0.47
SIMC1-201ENST00000332772 YTHDC2Q9H6S0 1430 aaKnown RBP12.14□□□□□ -0.47
SIMC1-201ENST00000332772 SETD1AO15047 1707 aaKnown RBP12.14□□□□□ -0.47
SIMC1-201ENST00000332772 CAPN15O75808 1086 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms