RNA–Protein interactions for RNA: ENST00000332245.9

KLHDC3-203, Transcript of kelch domain containing 3, humanhuman

TSL 2 BASIC

Gene KLHDC3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-203ENST00000332245 UBR1Q8IWV7 1749 aa22.68■■□□□ 1.22
KLHDC3-203ENST00000332245 SLIT1O75093 1534 aa22.68■■□□□ 1.22
KLHDC3-203ENST00000332245 SCAF11Q99590 1463 aaKnown RBP22.68■■□□□ 1.22
KLHDC3-203ENST00000332245 LRRC7Q96NW7 1537 aa22.66■■□□□ 1.22
KLHDC3-203ENST00000332245 TRPM2O94759 1503 aa22.66■■□□□ 1.22
KLHDC3-203ENST00000332245 CLTCL1P53675 1640 aa22.64■■□□□ 1.21
KLHDC3-203ENST00000332245 SLC52A1Q9NWF4 448 aa22.64■■□□□ 1.21
KLHDC3-203ENST00000332245 ALKQ9UM73 1620 aa22.63■■□□□ 1.21
KLHDC3-203ENST00000332245 TMEM2Q9UHN6 1383 aa22.63■■□□□ 1.21
KLHDC3-203ENST00000332245 STRCP1A6NGW2 1772 aa22.61■■□□□ 1.21
KLHDC3-203ENST00000332245 STAG3Q9UJ98 1225 aa22.6■■□□□ 1.21
KLHDC3-203ENST00000332245 DHX57Q6P158 1386 aaKnown RBP22.6■■□□□ 1.21
KLHDC3-203ENST00000332245 ANKRD30BQ9BXX2 1392 aa22.6■■□□□ 1.21
KLHDC3-203ENST00000332245 MYO5BQ9ULV0 1848 aa22.59■■□□□ 1.21
KLHDC3-203ENST00000332245 TMEM131LA2VDJ0 1609 aa22.59■■□□□ 1.21
KLHDC3-203ENST00000332245 ADGRB3O60242 1522 aa22.58■■□□□ 1.2
KLHDC3-203ENST00000332245 KDM5AP29375 1690 aaKnown RBP22.58■■□□□ 1.2
KLHDC3-203ENST00000332245 MED1Q15648 1581 aaPredicted RBP22.53■■□□□ 1.2
KLHDC3-203ENST00000332245 KCNA6P17658 529 aa22.53■■□□□ 1.2
KLHDC3-203ENST00000332245 KIF1BO60333 1816 aa22.51■■□□□ 1.19
KLHDC3-203ENST00000332245 CCDC144AA2RUR9 1427 aa22.51■■□□□ 1.19
KLHDC3-203ENST00000332245 CHGAP10645 457 aaKnown RBP22.5■■□□□ 1.19
KLHDC3-203ENST00000332245 SPATA31E1Q6ZUB1 1445 aa22.48■■□□□ 1.19
KLHDC3-203ENST00000332245 ZFYVE9O95405 1425 aa22.47■■□□□ 1.19
KLHDC3-203ENST00000332245 HDGFP51858 240 aaKnown RBP22.47■■□□□ 1.19
KLHDC3-203ENST00000332245 SLC26A8Q96RN1 970 aa22.47■■□□□ 1.19
KLHDC3-203ENST00000332245 FAM135BQ49AJ0 1406 aa22.46■■□□□ 1.19
KLHDC3-203ENST00000332245 TMEM94Q12767 1356 aa22.44■■□□□ 1.18
KLHDC3-203ENST00000332245 PROSER2Q86WR7 435 aaPredicted RBP22.44■■□□□ 1.18
KLHDC3-203ENST00000332245 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
KLHDC3-203ENST00000332245 RIMS2Q9UQ26 1411 aa22.43■■□□□ 1.18
KLHDC3-203ENST00000332245 XIRP1Q702N8 1843 aaKnown RBP22.43■■□□□ 1.18
KLHDC3-203ENST00000332245 NEXMIFQ5QGS0 1516 aa22.42■■□□□ 1.18
KLHDC3-203ENST00000332245 SIN3AQ96ST3 1273 aa22.41■■□□□ 1.18
KLHDC3-203ENST00000332245 NUTM2DQ5VT03 806 aaPredicted RBP22.41■■□□□ 1.18
KLHDC3-203ENST00000332245 RGL3Q3MIN7 710 aa22.4■■□□□ 1.18
KLHDC3-203ENST00000332245 ZNF326Q5BKZ1 582 aaKnown RBP22.39■■□□□ 1.17
KLHDC3-203ENST00000332245 SENP3Q9H4L4 574 aaPredicted RBP22.39■■□□□ 1.17
KLHDC3-203ENST00000332245 BCANQ96GW7 911 aa22.38■■□□□ 1.17
KLHDC3-203ENST00000332245 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
KLHDC3-203ENST00000332245 PPLO60437 1756 aa22.37■■□□□ 1.17
KLHDC3-203ENST00000332245 TBX22Q9Y458 520 aa22.37■■□□□ 1.17
KLHDC3-203ENST00000332245 IFT172Q9UG01 1749 aa22.37■■□□□ 1.17
KLHDC3-203ENST00000332245 NKTRP30414 1462 aaKnown RBP22.36■■□□□ 1.17
KLHDC3-203ENST00000332245 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.36■■□□□ 1.17
KLHDC3-203ENST00000332245 RPGRIP1LQ68CZ1 1315 aa22.33■■□□□ 1.17
KLHDC3-203ENST00000332245 NWD1Q149M9 1564 aa22.33■■□□□ 1.17
KLHDC3-203ENST00000332245 PPP1R15AO75807 674 aaPredicted RBP22.33■■□□□ 1.16
KLHDC3-203ENST00000332245 RBM33Q96EV2 1170 aaKnown RBP22.33■■□□□ 1.16
KLHDC3-203ENST00000332245 SLAIN2Q9P270 581 aa22.33■■□□□ 1.16
KLHDC3-203ENST00000332245 RGS17Q9UGC6 210 aaPredicted RBP22.32■■□□□ 1.16
KLHDC3-203ENST00000332245 MSH6P52701 1360 aa22.31■■□□□ 1.16
KLHDC3-203ENST00000332245 NEUROD1Q13562 356 aa22.31■■□□□ 1.16
KLHDC3-203ENST00000332245 NRXN3Q9Y4C0 1643 aa22.31■■□□□ 1.16
KLHDC3-203ENST00000332245 NCOA3Q9Y6Q9 1424 aa22.31■■□□□ 1.16
KLHDC3-203ENST00000332245 ADGRF5Q8IZF2 1346 aa22.28■■□□□ 1.16
KLHDC3-203ENST00000332245 ADAMTS13Q76LX8 1427 aa22.27■■□□□ 1.16
KLHDC3-203ENST00000332245 CHD2O14647 1828 aaKnown RBP22.26■■□□□ 1.15
KLHDC3-203ENST00000332245 PIK3R4Q99570 1358 aa22.26■■□□□ 1.15
KLHDC3-203ENST00000332245 SETBP1Q9Y6X0 1596 aa22.25■■□□□ 1.15
KLHDC3-203ENST00000332245 VGFO15240 615 aaPredicted RBP22.25■■□□□ 1.15
KLHDC3-203ENST00000332245 CCER1Q8TC90 406 aaPredicted RBP22.24■■□□□ 1.15
KLHDC3-203ENST00000332245 DCAF11Q8TEB1 546 aa22.24■■□□□ 1.15
KLHDC3-203ENST00000332245 ROBO1Q9Y6N7 1651 aa22.24■■□□□ 1.15
KLHDC3-203ENST00000332245 MYOM2P54296 1465 aa22.24■■□□□ 1.15
KLHDC3-203ENST00000332245 NRXN1Q9ULB1 1477 aa22.24■■□□□ 1.15
KLHDC3-203ENST00000332245 L3MBTL2Q969R5 705 aa22.23■■□□□ 1.15
KLHDC3-203ENST00000332245 STAC3Q96MF2 364 aa22.22■■□□□ 1.15
KLHDC3-203ENST00000332245 C19orf44Q9H6X5 657 aa22.22■■□□□ 1.15
KLHDC3-203ENST00000332245 KDM2AQ9Y2K7 1162 aa22.22■■□□□ 1.15
KLHDC3-203ENST00000332245 SETD1AO15047 1707 aaKnown RBP22.21■■□□□ 1.15
KLHDC3-203ENST00000332245 CLSPNQ9HAW4 1339 aa22.21■■□□□ 1.15
KLHDC3-203ENST00000332245 PIK3C2GO75747 1445 aa22.2■■□□□ 1.15
KLHDC3-203ENST00000332245 CADPS2Q86UW7 1296 aa22.19■■□□□ 1.14
KLHDC3-203ENST00000332245 DIP2AQ14689 1571 aa22.18■■□□□ 1.14
KLHDC3-203ENST00000332245 C14orf37Q86TY3 774 aa22.16■■□□□ 1.14
KLHDC3-203ENST00000332245 AMOTL2Q9Y2J4 779 aa22.16■■□□□ 1.14
KLHDC3-203ENST00000332245 METP08581 1390 aa22.16■■□□□ 1.14
KLHDC3-203ENST00000332245 JCADQ9P266 1359 aa22.16■■□□□ 1.14
KLHDC3-203ENST00000332245 POTEAQ6S8J7 498 aa22.15■■□□□ 1.14
KLHDC3-203ENST00000332245 PTPRUQ92729 1446 aa22.15■■□□□ 1.14
KLHDC3-203ENST00000332245 ATF3P18847 181 aa22.15■■□□□ 1.14
KLHDC3-203ENST00000332245 ASXL1Q8IXJ9 1541 aa22.13■■□□□ 1.13
KLHDC3-203ENST00000332245 CFAP70Q5T0N1 1121 aa22.13■■□□□ 1.13
KLHDC3-203ENST00000332245 C14orf93Q9H972 538 aaKnown RBP22.12■■□□□ 1.13
KLHDC3-203ENST00000332245 PRAG1Q86YV5 1406 aa22.12■■□□□ 1.13
KLHDC3-203ENST00000332245 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
KLHDC3-203ENST00000332245 PHLPP1O60346 1717 aa22.1■■□□□ 1.13
KLHDC3-203ENST00000332245 SPATA31A6Q5VVP1 1343 aa22.09■■□□□ 1.13
KLHDC3-203ENST00000332245 NBPF8Q3BBV2 869 aa22.09■■□□□ 1.13
KLHDC3-203ENST00000332245 TMEM132EQ6IEE7 984 aa22.09■■□□□ 1.13
KLHDC3-203ENST00000332245 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.07■■□□□ 1.12
KLHDC3-203ENST00000332245 XRN1Q8IZH2 1706 aaKnown RBP22.07■■□□□ 1.12
KLHDC3-203ENST00000332245 LAMC1P11047 1609 aa22.06■■□□□ 1.12
KLHDC3-203ENST00000332245 DCCP43146 1447 aa22.06■■□□□ 1.12
KLHDC3-203ENST00000332245 ADGRB1O14514 1584 aa22.06■■□□□ 1.12
KLHDC3-203ENST00000332245 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
KLHDC3-203ENST00000332245 BRINP3Q76B58 766 aa22.04■■□□□ 1.12
KLHDC3-203ENST00000332245 NBPF1Q3BBV0 1214 aa22.03■■□□□ 1.12
KLHDC3-203ENST00000332245 TIMELESSQ9UNS1 1208 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms