RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 RPGRIP1LQ68CZ1 1315 aa19.16■□□□□ 0.66
TRAIP-201ENST00000331456 CFAP65Q6ZU64 1925 aaKnown RBP19.15■□□□□ 0.66
TRAIP-201ENST00000331456 MRS2Q9HD23 443 aa19.15■□□□□ 0.66
TRAIP-201ENST00000331456 NRXN1Q9ULB1 1477 aa19.14■□□□□ 0.65
TRAIP-201ENST00000331456 ADGRF5Q8IZF2 1346 aa19.13■□□□□ 0.65
TRAIP-201ENST00000331456 AGLP35573 1532 aa19.13■□□□□ 0.65
TRAIP-201ENST00000331456 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
TRAIP-201ENST00000331456 SIGLEC1Q9BZZ2 1709 aa19.13■□□□□ 0.65
TRAIP-201ENST00000331456 DISP3Q9P2K9 1392 aa19.13■□□□□ 0.65
TRAIP-201ENST00000331456 KTN1Q86UP2 1357 aaKnown RBP19.12■□□□□ 0.65
TRAIP-201ENST00000331456 PIK3C2BO00750 1634 aa19.12■□□□□ 0.65
TRAIP-201ENST00000331456 SYNMO15061 1565 aa19.11■□□□□ 0.65
TRAIP-201ENST00000331456 CDCA8Q53HL2 280 aa19.11■□□□□ 0.65
TRAIP-201ENST00000331456 PPLO60437 1756 aa19.1■□□□□ 0.65
TRAIP-201ENST00000331456 SLC24A1O60721 1099 aa19.1■□□□□ 0.65
TRAIP-201ENST00000331456 CFAP70Q5T0N1 1121 aa19.1■□□□□ 0.65
TRAIP-201ENST00000331456 SLC52A1Q9NWF4 448 aa19.1■□□□□ 0.65
TRAIP-201ENST00000331456 CCDC184Q52MB2 194 aa19.09■□□□□ 0.65
TRAIP-201ENST00000331456 HNRNPUQ00839 825 aaKnown RBP eCLIP19.08■□□□□ 0.64
TRAIP-201ENST00000331456 RALBP1Q15311 655 aa19.08■□□□□ 0.64
TRAIP-201ENST00000331456 PREX1Q8TCU6 1659 aa19.07■□□□□ 0.64
TRAIP-201ENST00000331456 SETBP1Q9Y6X0 1596 aa19.06■□□□□ 0.64
TRAIP-201ENST00000331456 ARHGEF40Q8TER5 1519 aa19.06■□□□□ 0.64
TRAIP-201ENST00000331456 CNGB1Q14028 1251 aaPredicted RBP19.06■□□□□ 0.64
TRAIP-201ENST00000331456 PIK3C2GO75747 1445 aa19.05■□□□□ 0.64
TRAIP-201ENST00000331456 FAM9BQ8IZU0 186 aa19.05■□□□□ 0.64
TRAIP-201ENST00000331456 VGFO15240 615 aaPredicted RBP19.05■□□□□ 0.64
TRAIP-201ENST00000331456 IDI1Q13907 227 aa19.03■□□□□ 0.64
TRAIP-201ENST00000331456 C14orf93Q9H972 538 aaKnown RBP19.03■□□□□ 0.64
TRAIP-201ENST00000331456 MYBBP1AQ9BQG0 1328 aaKnown RBP19.02■□□□□ 0.64
TRAIP-201ENST00000331456 PANK3Q9H999 370 aa19.01■□□□□ 0.63
TRAIP-201ENST00000331456 NEXMIFQ5QGS0 1516 aa19.01■□□□□ 0.63
TRAIP-201ENST00000331456 PER1O15534 1290 aaPredicted RBP19.01■□□□□ 0.63
TRAIP-201ENST00000331456 ERVK-7P63135 1459 aa19.01■□□□□ 0.63
TRAIP-201ENST00000331456 TMC1Q8TDI8 760 aa19■□□□□ 0.63
TRAIP-201ENST00000331456 BRD4O60885 1362 aaPredicted RBP18.99■□□□□ 0.63
TRAIP-201ENST00000331456 MYO3AQ8NEV4 1616 aa18.99■□□□□ 0.63
TRAIP-201ENST00000331456 CLTCQ00610 1675 aaKnown RBP18.99■□□□□ 0.63
TRAIP-201ENST00000331456 ZFYVE9O95405 1425 aa18.99■□□□□ 0.63
TRAIP-201ENST00000331456 PARD3Q8TEW0 1356 aa18.98■□□□□ 0.63
TRAIP-201ENST00000331456 SBNO2Q9Y2G9 1366 aa18.97■□□□□ 0.63
TRAIP-201ENST00000331456 KDM5AP29375 1690 aaKnown RBP18.97■□□□□ 0.63
TRAIP-201ENST00000331456 TMEM131LA2VDJ0 1609 aa18.97■□□□□ 0.63
TRAIP-201ENST00000331456 FBXO31Q5XUX0 539 aaPredicted RBP18.96■□□□□ 0.63
TRAIP-201ENST00000331456 ADGRB1O14514 1584 aa18.96■□□□□ 0.63
TRAIP-201ENST00000331456 CENPJQ9HC77 1338 aaPredicted RBP18.96■□□□□ 0.63
TRAIP-201ENST00000331456 MLECQ14165 292 aa18.95■□□□□ 0.62
TRAIP-201ENST00000331456 ESF1Q9H501 851 aaKnown RBP18.95■□□□□ 0.62
TRAIP-201ENST00000331456 NLRP13Q86W25 1043 aa18.94■□□□□ 0.62
TRAIP-201ENST00000331456 STAG3Q9UJ98 1225 aa18.93■□□□□ 0.62
TRAIP-201ENST00000331456 KNSTRNQ9Y448 316 aa18.93■□□□□ 0.62
TRAIP-201ENST00000331456 SPATA31D1Q6ZQQ2 1576 aa18.93■□□□□ 0.62
TRAIP-201ENST00000331456 ZBED9Q6R2W3 1325 aa18.93■□□□□ 0.62
TRAIP-201ENST00000331456 NUTM2DQ5VT03 806 aaPredicted RBP18.93■□□□□ 0.62
TRAIP-201ENST00000331456 TRAK1Q9UPV9 953 aa18.93■□□□□ 0.62
TRAIP-201ENST00000331456 PNISRQ8TF01 805 aaKnown RBP18.92■□□□□ 0.62
TRAIP-201ENST00000331456 MYO5BQ9ULV0 1848 aa18.92■□□□□ 0.62
TRAIP-201ENST00000331456 CC2D1BQ5T0F9 858 aaKnown RBP18.91■□□□□ 0.62
TRAIP-201ENST00000331456 TMEM132EQ6IEE7 984 aa18.91■□□□□ 0.62
TRAIP-201ENST00000331456 MYOM1P52179 1685 aa18.9■□□□□ 0.62
TRAIP-201ENST00000331456 NEFLP07196 543 aa18.9■□□□□ 0.62
TRAIP-201ENST00000331456 SUPT16HQ9Y5B9 1047 aaKnown RBP18.89■□□□□ 0.61
TRAIP-201ENST00000331456 QRICH2Q9H0J4 1663 aa18.88■□□□□ 0.61
TRAIP-201ENST00000331456 ASXL1Q8IXJ9 1541 aa18.86■□□□□ 0.61
TRAIP-201ENST00000331456 LRPPRCP42704 1394 aaKnown RBP18.86■□□□□ 0.61
TRAIP-201ENST00000331456 ZMYM3Q14202 1370 aa18.86■□□□□ 0.61
TRAIP-201ENST00000331456 NPC1L1Q9UHC9 1359 aa18.85■□□□□ 0.61
TRAIP-201ENST00000331456 ARHGEF28Q8N1W1 1705 aaKnown RBP18.84■□□□□ 0.61
TRAIP-201ENST00000331456 A2ML1A8K2U0 1454 aa18.84■□□□□ 0.61
TRAIP-201ENST00000331456 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.61
TRAIP-201ENST00000331456 PUS7Q96PZ0 661 aaKnown RBP18.82■□□□□ 0.6
TRAIP-201ENST00000331456 EVC2Q86UK5 1308 aa18.81■□□□□ 0.6
TRAIP-201ENST00000331456 FKBP8Q14318 412 aa18.81■□□□□ 0.6
TRAIP-201ENST00000331456 RIMS2Q9UQ26 1411 aa18.8■□□□□ 0.6
TRAIP-201ENST00000331456 ALKQ9UM73 1620 aa18.79■□□□□ 0.6
TRAIP-201ENST00000331456 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.79■□□□□ 0.6
TRAIP-201ENST00000331456 TNRQ92752 1358 aa18.78■□□□□ 0.6
TRAIP-201ENST00000331456 YTHDC2Q9H6S0 1430 aaKnown RBP18.78■□□□□ 0.6
TRAIP-201ENST00000331456 INSRP06213 1382 aa18.78■□□□□ 0.6
TRAIP-201ENST00000331456 STK26Q9P289 416 aa18.78■□□□□ 0.6
TRAIP-201ENST00000331456 HDGFP51858 240 aaKnown RBP18.77■□□□□ 0.6
TRAIP-201ENST00000331456 PPP2R1AP30153 589 aa18.76■□□□□ 0.59
TRAIP-201ENST00000331456 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
TRAIP-201ENST00000331456 TULP4Q9NRJ4 1543 aa18.74■□□□□ 0.59
TRAIP-201ENST00000331456 PTPRMP28827 1452 aa18.74■□□□□ 0.59
TRAIP-201ENST00000331456 CARD14Q9BXL6 1004 aa18.74■□□□□ 0.59
TRAIP-201ENST00000331456 POGKQ9P215 609 aa18.74■□□□□ 0.59
TRAIP-201ENST00000331456 SMG6Q86US8 1419 aaKnown RBP18.73■□□□□ 0.59
TRAIP-201ENST00000331456 PELP1Q8IZL8 1130 aaKnown RBP18.73■□□□□ 0.59
TRAIP-201ENST00000331456 SAFB2Q14151 953 aaKnown RBP eCLIP18.71■□□□□ 0.59
TRAIP-201ENST00000331456 SLC12A5Q9H2X9 1139 aa18.71■□□□□ 0.59
TRAIP-201ENST00000331456 PRAM1Q96QH2 718 aa18.71■□□□□ 0.59
TRAIP-201ENST00000331456 NINLQ9Y2I6 1382 aa18.71■□□□□ 0.59
TRAIP-201ENST00000331456 NSD3Q9BZ95 1437 aa18.7■□□□□ 0.58
TRAIP-201ENST00000331456 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
TRAIP-201ENST00000331456 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
TRAIP-201ENST00000331456 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
TRAIP-201ENST00000331456 BLMP54132 1417 aaPredicted RBP18.69■□□□□ 0.58
TRAIP-201ENST00000331456 SRPK2P78362 688 aaKnown RBP18.68■□□□□ 0.58
TRAIP-201ENST00000331456 USP32Q8NFA0 1604 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms