RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 CHGAP10645 457 aaKnown RBP23.47■■□□□ 1.35
LRRC28-202ENST00000331450 NRXN3Q9Y4C0 1643 aa23.42■■□□□ 1.34
LRRC28-202ENST00000331450 LTKP29376 864 aa23.42■■□□□ 1.34
LRRC28-202ENST00000331450 ANKLE2Q86XL3 938 aa23.41■■□□□ 1.34
LRRC28-202ENST00000331450 CLSPNQ9HAW4 1339 aa23.4■■□□□ 1.34
LRRC28-202ENST00000331450 NCKAP5LQ9HCH0 1330 aa23.4■■□□□ 1.34
LRRC28-202ENST00000331450 RPGRIP1LQ68CZ1 1315 aa23.39■■□□□ 1.34
LRRC28-202ENST00000331450 MYOM2P54296 1465 aa23.39■■□□□ 1.34
LRRC28-202ENST00000331450 ZNF326Q5BKZ1 582 aaKnown RBP23.39■■□□□ 1.33
LRRC28-202ENST00000331450 SIN3AQ96ST3 1273 aa23.39■■□□□ 1.33
LRRC28-202ENST00000331450 NPHP4O75161 1426 aaPredicted RBP23.39■■□□□ 1.33
LRRC28-202ENST00000331450 SETBP1Q9Y6X0 1596 aa23.39■■□□□ 1.33
LRRC28-202ENST00000331450 TXNDC2Q86VQ3 553 aa23.38■■□□□ 1.33
LRRC28-202ENST00000331450 SETD1AO15047 1707 aaKnown RBP23.38■■□□□ 1.33
LRRC28-202ENST00000331450 PLEKHG1Q9ULL1 1385 aa23.38■■□□□ 1.33
LRRC28-202ENST00000331450 EID1Q9Y6B2 187 aa23.37■■□□□ 1.33
LRRC28-202ENST00000331450 RGL3Q3MIN7 710 aa23.36■■□□□ 1.33
LRRC28-202ENST00000331450 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.36■■□□□ 1.33
LRRC28-202ENST00000331450 NRXN1Q9ULB1 1477 aa23.36■■□□□ 1.33
LRRC28-202ENST00000331450 DIP2AQ14689 1571 aa23.35■■□□□ 1.33
LRRC28-202ENST00000331450 HDGFP51858 240 aaKnown RBP23.34■■□□□ 1.33
LRRC28-202ENST00000331450 LAMC1P11047 1609 aa23.32■■□□□ 1.32
LRRC28-202ENST00000331450 NUTM2DQ5VT03 806 aaPredicted RBP23.31■■□□□ 1.32
LRRC28-202ENST00000331450 CCER1Q8TC90 406 aaPredicted RBP23.31■■□□□ 1.32
LRRC28-202ENST00000331450 ADAMTS13Q76LX8 1427 aa23.31■■□□□ 1.32
LRRC28-202ENST00000331450 PIK3C2GO75747 1445 aa23.3■■□□□ 1.32
LRRC28-202ENST00000331450 VGFO15240 615 aaPredicted RBP23.29■■□□□ 1.32
LRRC28-202ENST00000331450 PPP1R15AO75807 674 aaPredicted RBP23.29■■□□□ 1.32
LRRC28-202ENST00000331450 NEUROD1Q13562 356 aa23.29■■□□□ 1.32
LRRC28-202ENST00000331450 DMRT2Q9Y5R5 561 aa23.28■■□□□ 1.32
LRRC28-202ENST00000331450 ALKQ9UM73 1620 aa23.27■■□□□ 1.32
LRRC28-202ENST00000331450 ADGRF5Q8IZF2 1346 aa23.27■■□□□ 1.32
LRRC28-202ENST00000331450 STRCP1A6NGW2 1772 aa23.26■■□□□ 1.31
LRRC28-202ENST00000331450 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
LRRC28-202ENST00000331450 KIAA1210Q9ULL0 1709 aa23.25■■□□□ 1.31
LRRC28-202ENST00000331450 NWD1Q149M9 1564 aa23.24■■□□□ 1.31
LRRC28-202ENST00000331450 DCAF11Q8TEB1 546 aa23.24■■□□□ 1.31
LRRC28-202ENST00000331450 STAC3Q96MF2 364 aa23.24■■□□□ 1.31
LRRC28-202ENST00000331450 L3MBTL2Q969R5 705 aa23.23■■□□□ 1.31
LRRC28-202ENST00000331450 TONSLQ96HA7 1378 aa23.23■■□□□ 1.31
LRRC28-202ENST00000331450 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
LRRC28-202ENST00000331450 XRN1Q8IZH2 1706 aaKnown RBP23.22■■□□□ 1.31
LRRC28-202ENST00000331450 PRAG1Q86YV5 1406 aa23.21■■□□□ 1.31
LRRC28-202ENST00000331450 TRPM1Q7Z4N2 1603 aa23.2■■□□□ 1.3
LRRC28-202ENST00000331450 SLC26A8Q96RN1 970 aa23.19■■□□□ 1.3
LRRC28-202ENST00000331450 TBX22Q9Y458 520 aa23.19■■□□□ 1.3
LRRC28-202ENST00000331450 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
LRRC28-202ENST00000331450 LTBP4Q8N2S1 1624 aa23.18■■□□□ 1.3
LRRC28-202ENST00000331450 PIK3R4Q99570 1358 aa23.17■■□□□ 1.3
LRRC28-202ENST00000331450 KNDC1Q76NI1 1749 aa23.17■■□□□ 1.3
LRRC28-202ENST00000331450 KDM2AQ9Y2K7 1162 aa23.17■■□□□ 1.3
LRRC28-202ENST00000331450 ADGRB1O14514 1584 aa23.16■■□□□ 1.3
LRRC28-202ENST00000331450 BCANQ96GW7 911 aa23.15■■□□□ 1.3
LRRC28-202ENST00000331450 METP08581 1390 aa23.14■■□□□ 1.3
LRRC28-202ENST00000331450 PTPRUQ92729 1446 aa23.14■■□□□ 1.29
LRRC28-202ENST00000331450 C14orf93Q9H972 538 aaKnown RBP23.13■■□□□ 1.29
LRRC28-202ENST00000331450 TIMELESSQ9UNS1 1208 aa23.13■■□□□ 1.29
LRRC28-202ENST00000331450 ZNF335Q9H4Z2 1342 aaPredicted RBP23.12■■□□□ 1.29
LRRC28-202ENST00000331450 NKTRP30414 1462 aaKnown RBP23.12■■□□□ 1.29
LRRC28-202ENST00000331450 XIRP1Q702N8 1843 aaKnown RBP23.12■■□□□ 1.29
LRRC28-202ENST00000331450 CPS1P31327 1500 aa23.12■■□□□ 1.29
LRRC28-202ENST00000331450 CFAP70Q5T0N1 1121 aa23.09■■□□□ 1.29
LRRC28-202ENST00000331450 TECPR2O15040 1411 aa23.07■■□□□ 1.28
LRRC28-202ENST00000331450 RALGAPBQ86X10 1494 aa23.06■■□□□ 1.28
LRRC28-202ENST00000331450 ARHGEF28Q8N1W1 1705 aaKnown RBP23.06■■□□□ 1.28
LRRC28-202ENST00000331450 KCNA6P17658 529 aa23.06■■□□□ 1.28
LRRC28-202ENST00000331450 NBPF8Q3BBV2 869 aa23.06■■□□□ 1.28
LRRC28-202ENST00000331450 YTHDC2Q9H6S0 1430 aaKnown RBP23.05■■□□□ 1.28
LRRC28-202ENST00000331450 LRPPRCP42704 1394 aaKnown RBP23.04■■□□□ 1.28
LRRC28-202ENST00000331450 LRRC7Q96NW7 1537 aa23.04■■□□□ 1.28
LRRC28-202ENST00000331450 PTCH1Q13635 1447 aa23.04■■□□□ 1.28
LRRC28-202ENST00000331450 DLC1Q96QB1 1528 aa23.03■■□□□ 1.28
LRRC28-202ENST00000331450 TMEM132EQ6IEE7 984 aa23.01■■□□□ 1.27
LRRC28-202ENST00000331450 AMOTL2Q9Y2J4 779 aa23.01■■□□□ 1.27
LRRC28-202ENST00000331450 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
LRRC28-202ENST00000331450 ABCC11Q96J66 1382 aa23■■□□□ 1.27
LRRC28-202ENST00000331450 NALCNQ8IZF0 1738 aa22.99■■□□□ 1.27
LRRC28-202ENST00000331450 NBPF1Q3BBV0 1214 aa22.98■■□□□ 1.27
LRRC28-202ENST00000331450 IQSEC2Q5JU85 1478 aa22.98■■□□□ 1.27
LRRC28-202ENST00000331450 ROBO2Q9HCK4 1378 aa22.97■■□□□ 1.27
LRRC28-202ENST00000331450 ROCK2O75116 1388 aaKnown RBP22.95■■□□□ 1.26
LRRC28-202ENST00000331450 FAM135BQ49AJ0 1406 aa22.95■■□□□ 1.26
LRRC28-202ENST00000331450 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.94■■□□□ 1.26
LRRC28-202ENST00000331450 NCOA3Q9Y6Q9 1424 aa22.93■■□□□ 1.26
LRRC28-202ENST00000331450 TMEM94Q12767 1356 aa22.93■■□□□ 1.26
LRRC28-202ENST00000331450 STK26Q9P289 416 aa22.91■■□□□ 1.26
LRRC28-202ENST00000331450 QRICH2Q9H0J4 1663 aa22.9■■□□□ 1.26
LRRC28-202ENST00000331450 PROSER2Q86WR7 435 aaPredicted RBP22.9■■□□□ 1.26
LRRC28-202ENST00000331450 SIRT1Q96EB6 747 aa22.9■■□□□ 1.26
LRRC28-202ENST00000331450 ADGRB2O60241 1585 aa22.89■■□□□ 1.26
LRRC28-202ENST00000331450 ADGRL3Q9HAR2 1447 aa22.89■■□□□ 1.25
LRRC28-202ENST00000331450 PLEKHH1Q9ULM0 1364 aa22.89■■□□□ 1.25
LRRC28-202ENST00000331450 TRAK1Q9UPV9 953 aa22.87■■□□□ 1.25
LRRC28-202ENST00000331450 CDC42BPGQ6DT37 1551 aa22.87■■□□□ 1.25
LRRC28-202ENST00000331450 CERKQ8TCT0 537 aa22.86■■□□□ 1.25
LRRC28-202ENST00000331450 RBM33Q96EV2 1170 aaKnown RBP22.85■■□□□ 1.25
LRRC28-202ENST00000331450 DCCP43146 1447 aa22.84■■□□□ 1.25
LRRC28-202ENST00000331450 FMN2Q9NZ56 1722 aa22.83■■□□□ 1.25
LRRC28-202ENST00000331450 WAPLQ7Z5K2 1190 aa22.83■■□□□ 1.25
LRRC28-202ENST00000331450 PRAM1Q96QH2 718 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms