RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
SNX20-202ENST00000330943 UNC13BO14795 1591 aa18.68■□□□□ 0.58
SNX20-202ENST00000330943 BCAR3O75815 825 aa18.68■□□□□ 0.58
SNX20-202ENST00000330943 SPINK5Q9NQ38 1064 aaPredicted RBP18.68■□□□□ 0.58
SNX20-202ENST00000330943 EIF3AQ14152 1382 aaKnown RBP18.68■□□□□ 0.58
SNX20-202ENST00000330943 CHD1O14646 1710 aa18.67■□□□□ 0.58
SNX20-202ENST00000330943 CLASP1Q7Z460 1538 aa18.66■□□□□ 0.58
SNX20-202ENST00000330943 CDC42BPBQ9Y5S2 1711 aa18.66■□□□□ 0.58
SNX20-202ENST00000330943 RNF17Q9BXT8 1623 aaKnown RBP18.65■□□□□ 0.58
SNX20-202ENST00000330943 NKTRP30414 1462 aaKnown RBP18.65■□□□□ 0.58
SNX20-202ENST00000330943 APAF1O14727 1248 aa18.65■□□□□ 0.58
SNX20-202ENST00000330943 IGHDP01880 384 aa18.65■□□□□ 0.58
SNX20-202ENST00000330943 SYCP2Q9BX26 1530 aa18.64■□□□□ 0.58
SNX20-202ENST00000330943 RSPH4AQ5TD94 716 aa18.64■□□□□ 0.58
SNX20-202ENST00000330943 TRMT2AQ8IZ69 625 aaKnown RBP18.64■□□□□ 0.58
SNX20-202ENST00000330943 USP19O94966 1318 aa18.64■□□□□ 0.57
SNX20-202ENST00000330943 PREX2Q70Z35 1606 aa18.64■□□□□ 0.57
SNX20-202ENST00000330943 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
SNX20-202ENST00000330943 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
SNX20-202ENST00000330943 FAM43AQ8N2R8 423 aa18.63■□□□□ 0.57
SNX20-202ENST00000330943 POGKQ9P215 609 aa18.63■□□□□ 0.57
SNX20-202ENST00000330943 PIK3C2GO75747 1445 aa18.62■□□□□ 0.57
SNX20-202ENST00000330943 ASXL1Q8IXJ9 1541 aa18.62■□□□□ 0.57
SNX20-202ENST00000330943 SEC24BO95487 1268 aa18.61■□□□□ 0.57
SNX20-202ENST00000330943 SLKQ9H2G2 1235 aaPredicted RBP18.61■□□□□ 0.57
SNX20-202ENST00000330943 AFAP1Q8N556 730 aa18.6■□□□□ 0.57
SNX20-202ENST00000330943 SYNMO15061 1565 aa18.6■□□□□ 0.57
SNX20-202ENST00000330943 E9PSI1 815 aa18.59■□□□□ 0.57
SNX20-202ENST00000330943 BECN1Q14457 450 aa18.59■□□□□ 0.57
SNX20-202ENST00000330943 CDCA8Q53HL2 280 aa18.59■□□□□ 0.57
SNX20-202ENST00000330943 CANXP27824 592 aaKnown RBP18.59■□□□□ 0.57
SNX20-202ENST00000330943 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
SNX20-202ENST00000330943 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
SNX20-202ENST00000330943 CGNL1Q0VF96 1302 aa18.58■□□□□ 0.56
SNX20-202ENST00000330943 ARHGAP5Q13017 1502 aa18.58■□□□□ 0.56
SNX20-202ENST00000330943 ABCC2Q92887 1545 aa18.58■□□□□ 0.56
SNX20-202ENST00000330943 IQGAP1P46940 1657 aa18.57■□□□□ 0.56
SNX20-202ENST00000330943 MAPK8IP3Q9UPT6 1336 aa18.57■□□□□ 0.56
SNX20-202ENST00000330943 ATP10AO60312 1499 aa18.57■□□□□ 0.56
SNX20-202ENST00000330943 CLUAP1Q96AJ1 413 aa18.57■□□□□ 0.56
SNX20-202ENST00000330943 COG6Q9Y2V7 657 aa18.57■□□□□ 0.56
SNX20-202ENST00000330943 MAST1Q9Y2H9 1570 aa18.57■□□□□ 0.56
SNX20-202ENST00000330943 PANK1Q8TE04 598 aa18.56■□□□□ 0.56
SNX20-202ENST00000330943 UBE2Q2Q8WVN8 375 aa18.56■□□□□ 0.56
SNX20-202ENST00000330943 RSPH6AQ9H0K4 717 aa18.56■□□□□ 0.56
SNX20-202ENST00000330943 MADDQ8WXG6 1647 aa18.55■□□□□ 0.56
SNX20-202ENST00000330943 CENPJQ9HC77 1338 aaPredicted RBP18.54■□□□□ 0.56
SNX20-202ENST00000330943 PDE3AQ14432 1141 aa18.54■□□□□ 0.56
SNX20-202ENST00000330943 MYOM1P52179 1685 aa18.53■□□□□ 0.56
SNX20-202ENST00000330943 PLXNC1O60486 1568 aa18.53■□□□□ 0.56
SNX20-202ENST00000330943 SCAF11Q99590 1463 aaKnown RBP18.53■□□□□ 0.56
SNX20-202ENST00000330943 NLRP1Q9C000 1473 aa18.52■□□□□ 0.56
SNX20-202ENST00000330943 TTC37Q6PGP7 1564 aa18.52■□□□□ 0.56
SNX20-202ENST00000330943 NPC1L1Q9UHC9 1359 aa18.52■□□□□ 0.55
SNX20-202ENST00000330943 DUOX2Q9NRD8 1548 aa18.51■□□□□ 0.55
SNX20-202ENST00000330943 NINLQ9Y2I6 1382 aa18.5■□□□□ 0.55
SNX20-202ENST00000330943 ARXQ96QS3 562 aa18.5■□□□□ 0.55
SNX20-202ENST00000330943 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
SNX20-202ENST00000330943 L1TD1Q5T7N2 865 aaKnown RBP18.49■□□□□ 0.55
SNX20-202ENST00000330943 ANTXR1Q9H6X2 564 aa18.49■□□□□ 0.55
SNX20-202ENST00000330943 RRAGDQ9NQL2 400 aaPredicted RBP18.47■□□□□ 0.55
SNX20-202ENST00000330943 WWC1Q8IX03 1113 aa18.47■□□□□ 0.55
SNX20-202ENST00000330943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNX20-202ENST00000330943 KDM5AP29375 1690 aaKnown RBP18.46■□□□□ 0.55
SNX20-202ENST00000330943 NEUROD2Q15784 382 aa18.46■□□□□ 0.55
SNX20-202ENST00000330943 SPHKAPQ2M3C7 1700 aa18.46■□□□□ 0.55
SNX20-202ENST00000330943 NGEFQ8N5V2 710 aa18.46■□□□□ 0.55
SNX20-202ENST00000330943 PMFBP1Q8TBY8 1022 aa18.45■□□□□ 0.54
SNX20-202ENST00000330943 TBC1D32Q96NH3 1257 aa18.45■□□□□ 0.54
SNX20-202ENST00000330943 SCAPERQ9BY12 1400 aa18.45■□□□□ 0.54
SNX20-202ENST00000330943 TBC1D2Q9BYX2 928 aa18.45■□□□□ 0.54
SNX20-202ENST00000330943 SPRYD3Q8NCJ5 442 aa18.44■□□□□ 0.54
SNX20-202ENST00000330943 EFCAB2Q5VUJ9 269 aa18.44■□□□□ 0.54
SNX20-202ENST00000330943 PCDHB15Q9Y5E8 787 aa18.44■□□□□ 0.54
SNX20-202ENST00000330943 TNNQ9UQP3 1299 aa18.43■□□□□ 0.54
SNX20-202ENST00000330943 PDZRN3Q9UPQ7 1066 aa18.43■□□□□ 0.54
SNX20-202ENST00000330943 TRAPPC8Q9Y2L5 1435 aa18.43■□□□□ 0.54
SNX20-202ENST00000330943 CARD14Q9BXL6 1004 aa18.43■□□□□ 0.54
SNX20-202ENST00000330943 RRP7AQ9Y3A4 280 aaKnown RBP18.43■□□□□ 0.54
SNX20-202ENST00000330943 RLBP1P12271 317 aa18.42■□□□□ 0.54
SNX20-202ENST00000330943 BCL2L13Q9BXK5 485 aa18.42■□□□□ 0.54
SNX20-202ENST00000330943 CEP152O94986 1710 aa18.42■□□□□ 0.54
SNX20-202ENST00000330943 RARSP54136 660 aaKnown RBP18.42■□□□□ 0.54
SNX20-202ENST00000330943 TRPM2O94759 1503 aa18.4■□□□□ 0.54
SNX20-202ENST00000330943 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
SNX20-202ENST00000330943 GOLGA6L3A6NEY3 463 aa18.39■□□□□ 0.53
SNX20-202ENST00000330943 CLTCL1P53675 1640 aa18.39■□□□□ 0.53
SNX20-202ENST00000330943 SPAG9O60271 1321 aaKnown RBP18.38■□□□□ 0.53
SNX20-202ENST00000330943 ERVK-7P63135 1459 aa18.38■□□□□ 0.53
SNX20-202ENST00000330943 XRCC6P12956 609 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNX20-202ENST00000330943 KIF3BO15066 747 aa18.38■□□□□ 0.53
SNX20-202ENST00000330943 TNNT2P45379 298 aaPredicted RBP18.38■□□□□ 0.53
SNX20-202ENST00000330943 POLR3AO14802 1390 aaPredicted RBP18.37■□□□□ 0.53
SNX20-202ENST00000330943 STAC3Q96MF2 364 aa18.37■□□□□ 0.53
SNX20-202ENST00000330943 MCM4P33991 863 aa18.36■□□□□ 0.53
SNX20-202ENST00000330943 AAMPQ13685 434 aa18.36■□□□□ 0.53
SNX20-202ENST00000330943 CFAP70Q5T0N1 1121 aa18.36■□□□□ 0.53
SNX20-202ENST00000330943 RWDD1Q9H446 243 aaPredicted RBP18.36■□□□□ 0.53
SNX20-202ENST00000330943 ZMYM3Q14202 1370 aa18.36■□□□□ 0.53
SNX20-202ENST00000330943 TCP11L2Q8N4U5 519 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms