RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CC2D1BQ5T0F9 858 aaKnown RBP19.62■□□□□ 0.73
TPM3-206ENST00000330188 RBM19Q9Y4C8 960 aaKnown RBP19.62■□□□□ 0.73
TPM3-206ENST00000330188 MROH2AA6NES4 1674 aa19.62■□□□□ 0.73
TPM3-206ENST00000330188 ABCA6Q8N139 1617 aa19.61■□□□□ 0.73
TPM3-206ENST00000330188 SYNMO15061 1565 aa19.6■□□□□ 0.73
TPM3-206ENST00000330188 FRMPD1Q5SYB0 1578 aa19.6■□□□□ 0.73
TPM3-206ENST00000330188 HECW2Q9P2P5 1572 aa19.59■□□□□ 0.73
TPM3-206ENST00000330188 MLH3Q9UHC1 1453 aa19.59■□□□□ 0.73
TPM3-206ENST00000330188 MYOM1P52179 1685 aa19.58■□□□□ 0.73
TPM3-206ENST00000330188 EIF3AQ14152 1382 aaKnown RBP19.57■□□□□ 0.72
TPM3-206ENST00000330188 ZMYM4Q5VZL5 1548 aa19.57■□□□□ 0.72
TPM3-206ENST00000330188 INSRP06213 1382 aa19.56■□□□□ 0.72
TPM3-206ENST00000330188 B4GALNT3Q6L9W6 998 aa19.56■□□□□ 0.72
TPM3-206ENST00000330188 CDCA8Q53HL2 280 aa19.55■□□□□ 0.72
TPM3-206ENST00000330188 ADGRB3O60242 1522 aa19.55■□□□□ 0.72
TPM3-206ENST00000330188 NRXN1Q9ULB1 1477 aa19.55■□□□□ 0.72
TPM3-206ENST00000330188 ADGRF5Q8IZF2 1346 aa19.54■□□□□ 0.72
TPM3-206ENST00000330188 KDM5AP29375 1690 aaKnown RBP19.54■□□□□ 0.72
TPM3-206ENST00000330188 BLMP54132 1417 aaPredicted RBP19.54■□□□□ 0.72
TPM3-206ENST00000330188 CFAP70Q5T0N1 1121 aa19.53■□□□□ 0.72
TPM3-206ENST00000330188 NPATQ14207 1427 aa19.51■□□□□ 0.71
TPM3-206ENST00000330188 KNSTRNQ9Y448 316 aa19.51■□□□□ 0.71
TPM3-206ENST00000330188 NEO1Q92859 1461 aa19.5■□□□□ 0.71
TPM3-206ENST00000330188 AMER1Q5JTC6 1135 aaPredicted RBP19.5■□□□□ 0.71
TPM3-206ENST00000330188 MYO3AQ8NEV4 1616 aa19.5■□□□□ 0.71
TPM3-206ENST00000330188 ASXL1Q8IXJ9 1541 aa19.5■□□□□ 0.71
TPM3-206ENST00000330188 PDE3BQ13370 1112 aa19.49■□□□□ 0.71
TPM3-206ENST00000330188 CFAP65Q6ZU64 1925 aaKnown RBP19.49■□□□□ 0.71
TPM3-206ENST00000330188 PPLO60437 1756 aa19.49■□□□□ 0.71
TPM3-206ENST00000330188 ERVK-7P63135 1459 aa19.49■□□□□ 0.71
TPM3-206ENST00000330188 ABCC3O15438 1527 aa19.48■□□□□ 0.71
TPM3-206ENST00000330188 NOS1P29475 1434 aa19.48■□□□□ 0.71
TPM3-206ENST00000330188 SALL2Q9Y467 1007 aaPredicted RBP19.48■□□□□ 0.71
TPM3-206ENST00000330188 SETBP1Q9Y6X0 1596 aa19.47■□□□□ 0.71
TPM3-206ENST00000330188 GGT6Q6P531 493 aa19.46■□□□□ 0.71
TPM3-206ENST00000330188 CAMSAP1Q5T5Y3 1602 aa19.46■□□□□ 0.71
TPM3-206ENST00000330188 PPP2R1AP30153 589 aa19.46■□□□□ 0.71
TPM3-206ENST00000330188 NPC1L1Q9UHC9 1359 aa19.46■□□□□ 0.71
TPM3-206ENST00000330188 DIP2CQ9Y2E4 1556 aa19.45■□□□□ 0.7
TPM3-206ENST00000330188 SLC24A1O60721 1099 aa19.45■□□□□ 0.7
TPM3-206ENST00000330188 MYT1Q01538 1121 aa19.45■□□□□ 0.7
TPM3-206ENST00000330188 SIGLEC1Q9BZZ2 1709 aa19.44■□□□□ 0.7
TPM3-206ENST00000330188 RICTORQ6R327 1708 aa19.43■□□□□ 0.7
TPM3-206ENST00000330188 PIK3C2GO75747 1445 aa19.43■□□□□ 0.7
TPM3-206ENST00000330188 RAPGEF3O95398 923 aa19.42■□□□□ 0.7
TPM3-206ENST00000330188 CHGAP10645 457 aaKnown RBP19.42■□□□□ 0.7
TPM3-206ENST00000330188 RRP1P56182 461 aaKnown RBP19.42■□□□□ 0.7
TPM3-206ENST00000330188 SBNO2Q9Y2G9 1366 aa19.42■□□□□ 0.7
TPM3-206ENST00000330188 RCAN3Q9UKA8 241 aa19.42■□□□□ 0.7
TPM3-206ENST00000330188 ZC3H13Q5T200 1668 aaKnown RBP19.42■□□□□ 0.7
TPM3-206ENST00000330188 PIK3C2BO00750 1634 aa19.41■□□□□ 0.7
TPM3-206ENST00000330188 CDCA7LQ96GN5 454 aa19.4■□□□□ 0.7
TPM3-206ENST00000330188 ADAMTS8Q9UP79 889 aa19.4■□□□□ 0.7
TPM3-206ENST00000330188 ADGRB1O14514 1584 aa19.39■□□□□ 0.7
TPM3-206ENST00000330188 CCDC136Q96JN2 1154 aa19.39■□□□□ 0.69
TPM3-206ENST00000330188 C14orf93Q9H972 538 aaKnown RBP19.37■□□□□ 0.69
TPM3-206ENST00000330188 QRICH2Q9H0J4 1663 aa19.37■□□□□ 0.69
TPM3-206ENST00000330188 RPGRIP1LQ68CZ1 1315 aa19.37■□□□□ 0.69
TPM3-206ENST00000330188 CENPJQ9HC77 1338 aaPredicted RBP19.36■□□□□ 0.69
TPM3-206ENST00000330188 FANCIQ9NVI1 1328 aa19.36■□□□□ 0.69
TPM3-206ENST00000330188 WDR43Q15061 677 aaKnown RBP eCLIP19.36■□□□□ 0.69
TPM3-206ENST00000330188 ANP32EQ9BTT0 268 aa19.34■□□□□ 0.69
TPM3-206ENST00000330188 CARD14Q9BXL6 1004 aa19.34■□□□□ 0.69
TPM3-206ENST00000330188 ARHGAP31Q2M1Z3 1444 aa19.34■□□□□ 0.69
TPM3-206ENST00000330188 NEXMIFQ5QGS0 1516 aa19.33■□□□□ 0.69
TPM3-206ENST00000330188 GLI2P10070 1586 aa19.33■□□□□ 0.69
TPM3-206ENST00000330188 TRAK1Q9UPV9 953 aa19.33■□□□□ 0.68
TPM3-206ENST00000330188 YEATS2Q9ULM3 1422 aa19.32■□□□□ 0.68
TPM3-206ENST00000330188 PLEKHH1Q9ULM0 1364 aa19.32■□□□□ 0.68
TPM3-206ENST00000330188 EXOC6Q8TAG9 804 aa19.31■□□□□ 0.68
TPM3-206ENST00000330188 MSH5O43196 834 aa19.29■□□□□ 0.68
TPM3-206ENST00000330188 TMEM132EQ6IEE7 984 aa19.29■□□□□ 0.68
TPM3-206ENST00000330188 ARHGEF28Q8N1W1 1705 aaKnown RBP19.29■□□□□ 0.68
TPM3-206ENST00000330188 ZNF521Q96K83 1311 aa19.28■□□□□ 0.68
TPM3-206ENST00000330188 PREX1Q8TCU6 1659 aa19.26■□□□□ 0.67
TPM3-206ENST00000330188 MYO5BQ9ULV0 1848 aa19.26■□□□□ 0.67
TPM3-206ENST00000330188 VGFO15240 615 aaPredicted RBP19.25■□□□□ 0.67
TPM3-206ENST00000330188 NSD3Q9BZ95 1437 aa19.25■□□□□ 0.67
TPM3-206ENST00000330188 USP32Q8NFA0 1604 aa19.24■□□□□ 0.67
TPM3-206ENST00000330188 IDI1Q13907 227 aa19.24■□□□□ 0.67
TPM3-206ENST00000330188 NUTM2DQ5VT03 806 aaPredicted RBP19.24■□□□□ 0.67
TPM3-206ENST00000330188 DUSP27Q5VZP5 1158 aa19.24■□□□□ 0.67
TPM3-206ENST00000330188 CYB5RLQ6IPT4 315 aa19.23■□□□□ 0.67
TPM3-206ENST00000330188 ZFYVE9O95405 1425 aa19.22■□□□□ 0.67
TPM3-206ENST00000330188 PLIN1O60240 522 aa19.22■□□□□ 0.67
TPM3-206ENST00000330188 TULP4Q9NRJ4 1543 aa19.22■□□□□ 0.67
TPM3-206ENST00000330188 TMEM131LA2VDJ0 1609 aa19.22■□□□□ 0.67
TPM3-206ENST00000330188 GOLGA2Q08379 1002 aa19.22■□□□□ 0.67
TPM3-206ENST00000330188 SLC12A5Q9H2X9 1139 aa19.22■□□□□ 0.67
TPM3-206ENST00000330188 CCDC146Q8IYE0 955 aa19.21■□□□□ 0.67
TPM3-206ENST00000330188 SLC52A1Q9NWF4 448 aa19.21■□□□□ 0.67
TPM3-206ENST00000330188 POLR3AO14802 1390 aaPredicted RBP19.21■□□□□ 0.67
TPM3-206ENST00000330188 DIP2BQ9P265 1576 aa19.21■□□□□ 0.67
TPM3-206ENST00000330188 RIMBP3CA6NJZ7 1639 aa19.21■□□□□ 0.67
TPM3-206ENST00000330188 RIMBP3BA6NNM3 1639 aa19.21■□□□□ 0.67
TPM3-206ENST00000330188 RIMBP3Q9UFD9 1639 aa19.21■□□□□ 0.67
TPM3-206ENST00000330188 SHPRHQ149N8 1683 aa19.2■□□□□ 0.66
TPM3-206ENST00000330188 PUS7Q96PZ0 661 aaKnown RBP19.19■□□□□ 0.66
TPM3-206ENST00000330188 SLFN5Q08AF3 891 aa19.18■□□□□ 0.66
TPM3-206ENST00000330188 APAF1O14727 1248 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms