RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
GDF3-201ENST00000329913 ZBTB22O15209 634 aa14.71□□□□□ -0.05
GDF3-201ENST00000329913 APLP2Q06481 763 aa14.71□□□□□ -0.05
GDF3-201ENST00000329913 FAM50AQ14320 339 aaKnown RBP14.7□□□□□ -0.06
GDF3-201ENST00000329913 PROSER2Q86WR7 435 aaPredicted RBP14.7□□□□□ -0.06
GDF3-201ENST00000329913 ROBO1Q9Y6N7 1651 aa14.69□□□□□ -0.06
GDF3-201ENST00000329913 NUTM2DQ5VT03 806 aaPredicted RBP14.69□□□□□ -0.06
GDF3-201ENST00000329913 ADGRB3O60242 1522 aa14.69□□□□□ -0.06
GDF3-201ENST00000329913 ANKRD30AQ9BXX3 1397 aa14.69□□□□□ -0.06
GDF3-201ENST00000329913 POTEAQ6S8J7 498 aa14.68□□□□□ -0.06
GDF3-201ENST00000329913 FOXD4L1Q9NU39 408 aa14.68□□□□□ -0.06
GDF3-201ENST00000329913 LMTK2Q8IWU2 1503 aa14.67□□□□□ -0.06
GDF3-201ENST00000329913 TET3O43151 1660 aa14.67□□□□□ -0.06
GDF3-201ENST00000329913 NOS1P29475 1434 aa14.66□□□□□ -0.06
GDF3-201ENST00000329913 KCNA6P17658 529 aa14.66□□□□□ -0.06
GDF3-201ENST00000329913 MYO5BQ9ULV0 1848 aa14.66□□□□□ -0.06
GDF3-201ENST00000329913 CHGAP10645 457 aaKnown RBP14.65□□□□□ -0.06
GDF3-201ENST00000329913 SETD1AO15047 1707 aaKnown RBP14.65□□□□□ -0.06
GDF3-201ENST00000329913 FAM135BQ49AJ0 1406 aa14.65□□□□□ -0.06
GDF3-201ENST00000329913 SLC4A2P04920 1241 aa14.64□□□□□ -0.07
GDF3-201ENST00000329913 GCC2Q8IWJ2 1684 aa14.63□□□□□ -0.07
GDF3-201ENST00000329913 PPP1R15AO75807 674 aaPredicted RBP14.63□□□□□ -0.07
GDF3-201ENST00000329913 NWD1Q149M9 1564 aa14.63□□□□□ -0.07
GDF3-201ENST00000329913 RIMS2Q9UQ26 1411 aa14.61□□□□□ -0.07
GDF3-201ENST00000329913 ADGRL2O95490 1459 aa14.61□□□□□ -0.07
GDF3-201ENST00000329913 KDM5AP29375 1690 aaKnown RBP14.61□□□□□ -0.07
GDF3-201ENST00000329913 ZFYVE9O95405 1425 aa14.6□□□□□ -0.07
GDF3-201ENST00000329913 ANKRD50Q9ULJ7 1429 aa14.6□□□□□ -0.07
GDF3-201ENST00000329913 NKTRP30414 1462 aaKnown RBP14.6□□□□□ -0.07
GDF3-201ENST00000329913 PHLPP1O60346 1717 aa14.6□□□□□ -0.07
GDF3-201ENST00000329913 MSH6P52701 1360 aa14.6□□□□□ -0.07
GDF3-201ENST00000329913 PPARGC1BQ86YN6 1023 aaKnown RBP14.59□□□□□ -0.07
GDF3-201ENST00000329913 ITGAEP38570 1179 aa14.58□□□□□ -0.08
GDF3-201ENST00000329913 C14orf37Q86TY3 774 aa14.58□□□□□ -0.08
GDF3-201ENST00000329913 TMEM131LA2VDJ0 1609 aa14.57□□□□□ -0.08
GDF3-201ENST00000329913 SLC52A1Q9NWF4 448 aa14.57□□□□□ -0.08
GDF3-201ENST00000329913 SLAIN2Q9P270 581 aa14.57□□□□□ -0.08
GDF3-201ENST00000329913 PLEKHG1Q9ULL1 1385 aa14.57□□□□□ -0.08
GDF3-201ENST00000329913 LRP6O75581 1613 aa14.56□□□□□ -0.08
GDF3-201ENST00000329913 E9PCH4 1651 aa14.55□□□□□ -0.08
GDF3-201ENST00000329913 CHD2O14647 1828 aaKnown RBP14.55□□□□□ -0.08
GDF3-201ENST00000329913 ADAMTS13Q76LX8 1427 aa14.54□□□□□ -0.08
GDF3-201ENST00000329913 COL16A1Q07092 1604 aaPredicted RBP14.54□□□□□ -0.08
GDF3-201ENST00000329913 UNC13BO14795 1591 aa14.53□□□□□ -0.08
GDF3-201ENST00000329913 RPRD2Q5VT52 1461 aaKnown RBP14.53□□□□□ -0.08
GDF3-201ENST00000329913 JCADQ9P266 1359 aa14.52□□□□□ -0.08
GDF3-201ENST00000329913 TRIM52Q96A61 297 aa14.52□□□□□ -0.09
GDF3-201ENST00000329913 MEX3CQ5U5Q3 659 aaKnown RBP14.51□□□□□ -0.09
GDF3-201ENST00000329913 PTPRUQ92729 1446 aa14.5□□□□□ -0.09
GDF3-201ENST00000329913 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.5□□□□□ -0.09
GDF3-201ENST00000329913 NUTM2BA6NNL0 878 aaPredicted RBP14.5□□□□□ -0.09
GDF3-201ENST00000329913 NUTM2EB1AL46 878 aaPredicted RBP14.5□□□□□ -0.09
GDF3-201ENST00000329913 NUTM2AQ8IVF1 878 aaPredicted RBP14.5□□□□□ -0.09
GDF3-201ENST00000329913 DDX17Q92841 729 aaKnown RBP14.48□□□□□ -0.09
GDF3-201ENST00000329913 TBX22Q9Y458 520 aa14.48□□□□□ -0.09
GDF3-201ENST00000329913 NUP155O75694 1391 aa14.47□□□□□ -0.09
GDF3-201ENST00000329913 ATF3P18847 181 aa14.47□□□□□ -0.09
GDF3-201ENST00000329913 AMOTL2Q9Y2J4 779 aa14.47□□□□□ -0.09
GDF3-201ENST00000329913 IQGAP3Q86VI3 1631 aa14.47□□□□□ -0.09
GDF3-201ENST00000329913 BRINP3Q76B58 766 aa14.45□□□□□ -0.1
GDF3-201ENST00000329913 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.45□□□□□ -0.1
GDF3-201ENST00000329913 AHDC1Q5TGY3 1603 aaPredicted RBP14.44□□□□□ -0.1
GDF3-201ENST00000329913 NRXN3Q9Y4C0 1643 aa14.44□□□□□ -0.1
GDF3-201ENST00000329913 HDGFP51858 240 aaKnown RBP14.44□□□□□ -0.1
GDF3-201ENST00000329913 TRPM2O94759 1503 aa14.44□□□□□ -0.1
GDF3-201ENST00000329913 DIP2AQ14689 1571 aa14.43□□□□□ -0.1
GDF3-201ENST00000329913 ZNF326Q5BKZ1 582 aaKnown RBP14.43□□□□□ -0.1
GDF3-201ENST00000329913 CADPS2Q86UW7 1296 aa14.43□□□□□ -0.1
GDF3-201ENST00000329913 C19orf44Q9H6X5 657 aa14.43□□□□□ -0.1
GDF3-201ENST00000329913 METP08581 1390 aa14.43□□□□□ -0.1
GDF3-201ENST00000329913 SHPRHQ149N8 1683 aa14.42□□□□□ -0.1
GDF3-201ENST00000329913 ASXL1Q8IXJ9 1541 aa14.41□□□□□ -0.1
GDF3-201ENST00000329913 ROCK1Q13464 1354 aa14.41□□□□□ -0.1
GDF3-201ENST00000329913 XRN1Q8IZH2 1706 aaKnown RBP14.41□□□□□ -0.1
GDF3-201ENST00000329913 SPATA31A6Q5VVP1 1343 aa14.41□□□□□ -0.1
GDF3-201ENST00000329913 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
GDF3-201ENST00000329913 MST1RQ04912 1400 aa14.4□□□□□ -0.1
GDF3-201ENST00000329913 SPHKAPQ2M3C7 1700 aa14.39□□□□□ -0.11
GDF3-201ENST00000329913 UPF1Q92900 1129 aaKnown RBP eCLIP14.39□□□□□ -0.11
GDF3-201ENST00000329913 NCOA3Q9Y6Q9 1424 aa14.39□□□□□ -0.11
GDF3-201ENST00000329913 AFF2P51816 1311 aa14.39□□□□□ -0.11
GDF3-201ENST00000329913 CLTCL1P53675 1640 aa14.38□□□□□ -0.11
GDF3-201ENST00000329913 PIK3R4Q99570 1358 aa14.37□□□□□ -0.11
GDF3-201ENST00000329913 SRCAPQ6ZRS2 3230 aa14.37□□□□□ -0.11
GDF3-201ENST00000329913 ZNF772Q68DY9 489 aaPredicted RBP14.37□□□□□ -0.11
GDF3-201ENST00000329913 C8orf37Q96NL8 207 aa14.37□□□□□ -0.11
GDF3-201ENST00000329913 SETBP1Q9Y6X0 1596 aa14.37□□□□□ -0.11
GDF3-201ENST00000329913 NALCNQ8IZF0 1738 aa14.37□□□□□ -0.11
GDF3-201ENST00000329913 NHSL1Q5SYE7 1610 aa14.35□□□□□ -0.11
GDF3-201ENST00000329913 ADAMTS2O95450 1211 aa14.35□□□□□ -0.11
GDF3-201ENST00000329913 RXRBP28702 533 aa14.35□□□□□ -0.11
GDF3-201ENST00000329913 NEXMIFQ5QGS0 1516 aa14.35□□□□□ -0.11
GDF3-201ENST00000329913 RGS12O14924 1447 aa14.33□□□□□ -0.11
GDF3-201ENST00000329913 ADGRL3Q9HAR2 1447 aa14.33□□□□□ -0.11
GDF3-201ENST00000329913 PNPLA6Q8IY17 1366 aa14.33□□□□□ -0.12
GDF3-201ENST00000329913 DCCP43146 1447 aa14.32□□□□□ -0.12
GDF3-201ENST00000329913 SETD5Q9C0A6 1442 aa14.32□□□□□ -0.12
GDF3-201ENST00000329913 ORAI2Q96SN7 254 aa14.3□□□□□ -0.12
GDF3-201ENST00000329913 ROBO2Q9HCK4 1378 aa14.3□□□□□ -0.12
GDF3-201ENST00000329913 QTRT2Q9H974 415 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms