RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 FOXD4L5Q5VV16 416 aaPredicted RBP6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 FOXD4L4Q8WXT5 416 aaPredicted RBP6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 FBXW7Q969H0 707 aa6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 GPATCH3Q96I76 525 aa6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 AAMPQ13685 434 aa6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 DCTN1Q14203 1278 aa6.53□□□□□ -1.36
SDR42E1-201ENST00000328945 REC8O95072 547 aa6.53□□□□□ -1.36
SDR42E1-201ENST00000328945 CNKSR2Q8WXI2 1034 aa6.53□□□□□ -1.36
SDR42E1-201ENST00000328945 TRAK2O60296 914 aa6.53□□□□□ -1.36
SDR42E1-201ENST00000328945 CCP110O43303 1012 aa6.53□□□□□ -1.36
SDR42E1-201ENST00000328945 CDR1P51861 262 aa6.53□□□□□ -1.36
SDR42E1-201ENST00000328945 RUFY1Q96T51 708 aa6.53□□□□□ -1.36
SDR42E1-201ENST00000328945 NOL8Q76FK4 1167 aaKnown RBP6.53□□□□□ -1.36
SDR42E1-201ENST00000328945 PDS5BQ9NTI5 1447 aa6.53□□□□□ -1.36
SDR42E1-201ENST00000328945 FOXD1Q16676 465 aa6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 RRP12Q5JTH9 1297 aaKnown RBP6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 ERCC4Q92889 916 aaPredicted RBP6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 CHMP4AQ9BY43 222 aa6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 SMC4Q9NTJ3 1288 aa6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 GRPEL1Q9HAV7 217 aa6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 CARMIL1Q5VZK9 1371 aa6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 MBD3O95983 291 aa6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 ZSCAN30Q86W11 494 aa6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 TSR1Q2NL82 804 aaKnown RBP6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 CEP89Q96ST8 783 aa6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 WASHC2CQ9Y4E1 1318 aa6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 CAVIN1Q6NZI2 390 aaKnown RBP6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 CRBNQ96SW2 442 aa6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 PRKRIP1Q9H875 184 aaPredicted RBP6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 PDCL2Q8N4E4 241 aa6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 LETM1O95202 739 aaPredicted RBP6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.52□□□□□ -1.37
SDR42E1-201ENST00000328945 SYTL4Q96C24 671 aaPredicted RBP6.51□□□□□ -1.37
SDR42E1-201ENST00000328945 AMPHP49418 695 aa6.51□□□□□ -1.37
SDR42E1-201ENST00000328945 TSPY26PQ9H489 355 aa6.51□□□□□ -1.37
SDR42E1-201ENST00000328945 CWC22Q9HCG8 908 aaKnown RBP6.51□□□□□ -1.37
SDR42E1-201ENST00000328945 CALCOCO1Q9P1Z2 691 aa6.51□□□□□ -1.37
SDR42E1-201ENST00000328945 C22orf23Q9BZE7 217 aa6.51□□□□□ -1.37
SDR42E1-201ENST00000328945 CHMP4CQ96CF2 233 aa6.51□□□□□ -1.37
SDR42E1-201ENST00000328945 MAPK8IP2Q13387 824 aaPredicted RBP6.51□□□□□ -1.37
SDR42E1-201ENST00000328945 IPO7O95373 1038 aaKnown RBP6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 U2AF1L5P0DN76 240 aaPredicted RBP6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 U2AF1Q01081 240 aaKnown RBP eCLIP6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 MCTP1Q6DN14 999 aa6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 TRIM6-TRIM34B2RNG4 842 aa6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 TRIM34Q9BYJ4 488 aa6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 CNTLNQ9NXG0 1405 aa6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 KIAA0754O94854 1291 aa6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 DHX8Q14562 1220 aaKnown RBP6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 TPD52L1Q16890 204 aaPredicted RBP6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 CCDC112Q8NEF3 446 aa6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 HSP90AB3PQ58FF7 597 aa6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 NAT10Q9H0A0 1025 aaKnown RBP6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 EFCAB2Q5VUJ9 269 aa6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 CGNQ9P2M7 1197 aaKnown RBP6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 TCEAL9Q9UHQ7 104 aa6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 SPAG9O60271 1321 aaKnown RBP6.5□□□□□ -1.37
SDR42E1-201ENST00000328945 E9PSI1 815 aa6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 BBXQ8WY36 941 aaPredicted RBP6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 CCDC88BA6NC98 1476 aa6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 KIF3BO15066 747 aa6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 H3BQV1 296 aa6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 IFFO2Q5TF58 517 aa6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 AEBP1Q8IUX7 1158 aa6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 STK31Q9BXU1 1019 aa6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 SASS6Q6UVJ0 657 aa6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 PLIN1O60240 522 aa6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 PKD2Q13563 968 aa6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 ZHX1Q9UKY1 873 aaPredicted RBP6.49□□□□□ -1.37
SDR42E1-201ENST00000328945 RNF20Q5VTR2 975 aa6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 BACH2Q9BYV9 841 aa6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 TOMM22Q9NS69 142 aa6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 ERICH4A6NGS2 130 aa6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 NGEFQ8N5V2 710 aa6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 RAD21O60216 631 aa6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 PPP1R1BQ9UD71 204 aaPredicted RBP6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 CTDP1Q9Y5B0 961 aaPredicted RBP6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 SOGA1O94964 1423 aa6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 IRX3P78415 501 aaPredicted RBP6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 GIMAP7Q8NHV1 300 aa6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 PRDM10Q9NQV6 1147 aa6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 RASSF8Q8NHQ8 419 aa6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 CLUAP1Q96AJ1 413 aa6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 SF3A1Q15459 793 aaKnown RBP6.48□□□□□ -1.37
SDR42E1-201ENST00000328945 MARCH6O60337 910 aa6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 ERLIN1O75477 346 aa6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 ANKRD20A12PQ8NF67 263 aa6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 HDAC5Q9UQL6 1122 aa6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 TDRD9Q8NDG6 1382 aaKnown RBP6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 DNAJC2Q99543 621 aaKnown RBP6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 INCENPQ9NQS7 918 aa6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 DYNC1I1O14576 645 aa6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 ZKSCAN2Q63HK3 967 aa6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 EIF3JO75822 258 aaKnown RBP6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 ABCC8Q09428 1581 aa6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 GOLGA6L7A0A1B0GV03 622 aa6.47□□□□□ -1.37
SDR42E1-201ENST00000328945 PSME1Q06323 249 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 DDX19BQ9UMR2 479 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 KIF7Q2M1P5 1343 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 C1orf141Q5JVX7 400 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms