RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 CHMP4AQ9BY43 222 aa11.89□□□□□ -0.51
NPIPA1-201ENST00000328085 TMEM51Q9NW97 253 aa11.89□□□□□ -0.51
NPIPA1-201ENST00000328085 DYNC1I1O14576 645 aa11.88□□□□□ -0.51
NPIPA1-201ENST00000328085 OFD1O75665 1012 aa11.88□□□□□ -0.51
NPIPA1-201ENST00000328085 NCOA2Q15596 1464 aa11.88□□□□□ -0.51
NPIPA1-201ENST00000328085 ARHGEF12Q9NZN5 1544 aa11.87□□□□□ -0.51
NPIPA1-201ENST00000328085 CLGNO14967 610 aa11.87□□□□□ -0.51
NPIPA1-201ENST00000328085 NPM2Q86SE8 214 aaKnown RBP11.87□□□□□ -0.51
NPIPA1-201ENST00000328085 ZNF335Q9H4Z2 1342 aaPredicted RBP11.86□□□□□ -0.51
NPIPA1-201ENST00000328085 HS1BP3Q53T59 392 aa11.86□□□□□ -0.51
NPIPA1-201ENST00000328085 MYH16Q9H6N6 1097 aa11.86□□□□□ -0.51
NPIPA1-201ENST00000328085 EFCAB5A4FU69 1503 aa11.86□□□□□ -0.51
NPIPA1-201ENST00000328085 FRAT2O75474 233 aaPredicted RBP11.85□□□□□ -0.51
NPIPA1-201ENST00000328085 MMP14P50281 582 aa11.85□□□□□ -0.51
NPIPA1-201ENST00000328085 PIP4K2BP78356 416 aa11.85□□□□□ -0.51
NPIPA1-201ENST00000328085 ZFP91Q96JP5 570 aaPredicted RBP11.85□□□□□ -0.51
NPIPA1-201ENST00000328085 ZMYM4Q5VZL5 1548 aa11.85□□□□□ -0.51
NPIPA1-201ENST00000328085 XRCC6P12956 609 aaKnown RBP eCLIP11.84□□□□□ -0.51
NPIPA1-201ENST00000328085 SCAPERQ9BY12 1400 aa11.84□□□□□ -0.51
NPIPA1-201ENST00000328085 HECW1Q76N89 1606 aa11.83□□□□□ -0.52
NPIPA1-201ENST00000328085 CDK11BP21127 795 aaKnown RBP11.83□□□□□ -0.52
NPIPA1-201ENST00000328085 BECN1Q14457 450 aa11.83□□□□□ -0.52
NPIPA1-201ENST00000328085 KIAA1211Q6ZU35 1233 aa11.83□□□□□ -0.52
NPIPA1-201ENST00000328085 CCDC94Q9BW85 323 aaPredicted RBP11.83□□□□□ -0.52
NPIPA1-201ENST00000328085 TSPYL1Q9H0U9 437 aa11.83□□□□□ -0.52
NPIPA1-201ENST00000328085 MAGI2Q86UL8 1455 aa11.83□□□□□ -0.52
NPIPA1-201ENST00000328085 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
NPIPA1-201ENST00000328085 IRX3P78415 501 aaPredicted RBP11.82□□□□□ -0.52
NPIPA1-201ENST00000328085 CSPP1Q1MSJ5 1256 aa11.82□□□□□ -0.52
NPIPA1-201ENST00000328085 FOXD4L1Q9NU39 408 aa11.82□□□□□ -0.52
NPIPA1-201ENST00000328085 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
NPIPA1-201ENST00000328085 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
NPIPA1-201ENST00000328085 ATP10AO60312 1499 aa11.82□□□□□ -0.52
NPIPA1-201ENST00000328085 CNTLNQ9NXG0 1405 aa11.81□□□□□ -0.52
NPIPA1-201ENST00000328085 DNAJC2Q99543 621 aaKnown RBP11.81□□□□□ -0.52
NPIPA1-201ENST00000328085 YY1AP1Q9H869 796 aa11.81□□□□□ -0.52
NPIPA1-201ENST00000328085 SETD1BQ9UPS6 1966 aaKnown RBP11.81□□□□□ -0.52
NPIPA1-201ENST00000328085 SETD5Q9C0A6 1442 aa11.8□□□□□ -0.52
NPIPA1-201ENST00000328085 UBTFP17480 764 aaKnown RBP11.8□□□□□ -0.52
NPIPA1-201ENST00000328085 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
NPIPA1-201ENST00000328085 ZNF622Q969S3 477 aaKnown RBP eCLIP11.8□□□□□ -0.52
NPIPA1-201ENST00000328085 CTTNBP2Q8WZ74 1663 aa11.8□□□□□ -0.52
NPIPA1-201ENST00000328085 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
NPIPA1-201ENST00000328085 C9orf84Q5VXU9 1444 aa11.78□□□□□ -0.52
NPIPA1-201ENST00000328085 PTMAP06454 111 aaKnown RBP11.78□□□□□ -0.52
NPIPA1-201ENST00000328085 ZSCAN20P17040 1043 aaPredicted RBP11.78□□□□□ -0.52
NPIPA1-201ENST00000328085 MCM5P33992 734 aa11.78□□□□□ -0.52
NPIPA1-201ENST00000328085 FAM193AP78312 1265 aa11.78□□□□□ -0.52
NPIPA1-201ENST00000328085 RGS22Q8NE09 1264 aa11.78□□□□□ -0.52
NPIPA1-201ENST00000328085 PLEKHD1A6NEE1 506 aa11.77□□□□□ -0.53
NPIPA1-201ENST00000328085 DSG3P32926 999 aa11.77□□□□□ -0.53
NPIPA1-201ENST00000328085 FAM161AQ3B820 660 aa11.77□□□□□ -0.53
NPIPA1-201ENST00000328085 ZSCAN30Q86W11 494 aa11.77□□□□□ -0.53
NPIPA1-201ENST00000328085 CFAP74Q9C0B2 1584 aa11.76□□□□□ -0.53
NPIPA1-201ENST00000328085 RIPK4P57078 832 aa11.76□□□□□ -0.53
NPIPA1-201ENST00000328085 CCDC173Q0VFZ6 552 aa11.76□□□□□ -0.53
NPIPA1-201ENST00000328085 SECISBP2LQ93073 1101 aaKnown RBP11.76□□□□□ -0.53
NPIPA1-201ENST00000328085 RAB3GAP2Q9H2M9 1393 aa11.76□□□□□ -0.53
NPIPA1-201ENST00000328085 TRAPPC8Q9Y2L5 1435 aa11.76□□□□□ -0.53
NPIPA1-201ENST00000328085 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
NPIPA1-201ENST00000328085 ZNF830Q96NB3 372 aaPredicted RBP11.75□□□□□ -0.53
NPIPA1-201ENST00000328085 POGKQ9P215 609 aa11.75□□□□□ -0.53
NPIPA1-201ENST00000328085 MAP3K1Q13233 1512 aa11.75□□□□□ -0.53
NPIPA1-201ENST00000328085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.75□□□□□ -0.53
NPIPA1-201ENST00000328085 C3P01024 1663 aa11.75□□□□□ -0.53
NPIPA1-201ENST00000328085 TOM1O60784 492 aa11.74□□□□□ -0.53
NPIPA1-201ENST00000328085 PDE3BQ13370 1112 aa11.74□□□□□ -0.53
NPIPA1-201ENST00000328085 DNTTIP2Q5QJE6 756 aaKnown RBP11.74□□□□□ -0.53
NPIPA1-201ENST00000328085 PPP1R9BQ96SB3 815 aa11.74□□□□□ -0.53
NPIPA1-201ENST00000328085 ESF1Q9H501 851 aaKnown RBP11.74□□□□□ -0.53
NPIPA1-201ENST00000328085 NINLQ9Y2I6 1382 aa11.74□□□□□ -0.53
NPIPA1-201ENST00000328085 RAPGEF6Q8TEU7 1601 aa11.74□□□□□ -0.53
NPIPA1-201ENST00000328085 ZNF500O60304 480 aaPredicted RBP11.73□□□□□ -0.53
NPIPA1-201ENST00000328085 GRPEL1Q9HAV7 217 aa11.73□□□□□ -0.53
NPIPA1-201ENST00000328085 RGS17Q9UGC6 210 aaPredicted RBP11.73□□□□□ -0.53
NPIPA1-201ENST00000328085 NUP153P49790 1475 aaKnown RBP11.72□□□□□ -0.53
NPIPA1-201ENST00000328085 ZMYM3Q14202 1370 aa11.72□□□□□ -0.53
NPIPA1-201ENST00000328085 KTN1Q86UP2 1357 aaKnown RBP11.72□□□□□ -0.53
NPIPA1-201ENST00000328085 IBTKQ9P2D0 1353 aaPredicted RBP11.72□□□□□ -0.53
NPIPA1-201ENST00000328085 CREBRFQ8IUR6 639 aa11.72□□□□□ -0.53
NPIPA1-201ENST00000328085 CEP120Q8N960 986 aa11.72□□□□□ -0.53
NPIPA1-201ENST00000328085 PRKRIP1Q9H875 184 aaPredicted RBP11.72□□□□□ -0.53
NPIPA1-201ENST00000328085 ZHX1Q9UKY1 873 aaPredicted RBP11.72□□□□□ -0.53
NPIPA1-201ENST00000328085 CCDC66A2RUB6 948 aa11.71□□□□□ -0.53
NPIPA1-201ENST00000328085 DDX11L8A8MPP1 907 aa11.71□□□□□ -0.53
NPIPA1-201ENST00000328085 HMGB1P09429 215 aaKnown RBP11.71□□□□□ -0.53
NPIPA1-201ENST00000328085 MSNP26038 577 aaKnown RBP11.71□□□□□ -0.53
NPIPA1-201ENST00000328085 RRP1P56182 461 aaKnown RBP11.71□□□□□ -0.53
NPIPA1-201ENST00000328085 SKOR2Q2VWA4 1001 aaPredicted RBP11.71□□□□□ -0.53
NPIPA1-201ENST00000328085 DHX37Q8IY37 1157 aaKnown RBP11.71□□□□□ -0.53
NPIPA1-201ENST00000328085 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
NPIPA1-201ENST00000328085 INSRP06213 1382 aa11.7□□□□□ -0.54
NPIPA1-201ENST00000328085 GEMIN8Q9NWZ8 242 aaKnown RBP11.7□□□□□ -0.54
NPIPA1-201ENST00000328085 TULP1O00294 542 aaPredicted RBP11.69□□□□□ -0.54
NPIPA1-201ENST00000328085 SASS6Q6UVJ0 657 aa11.69□□□□□ -0.54
NPIPA1-201ENST00000328085 AFAP1Q8N556 730 aa11.69□□□□□ -0.54
NPIPA1-201ENST00000328085 MRS2Q9HD23 443 aa11.69□□□□□ -0.54
NPIPA1-201ENST00000328085 FAM13BQ9NYF5 915 aa11.69□□□□□ -0.54
NPIPA1-201ENST00000328085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.68□□□□□ -0.54
NPIPA1-201ENST00000328085 PKD2Q13563 968 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms