RNA–Protein interactions for RNA: ENST00000327726.10

CFD-201, Transcript of complement factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CFD, Length 1,201 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-201ENST00000327726 PPP1R15AO75807 674 aaPredicted RBP31.62■■■□□ 2.65
CFD-201ENST00000327726 ZFYVE9O95405 1425 aa31.62■■■□□ 2.65
CFD-201ENST00000327726 KCNA6P17658 529 aa31.62■■■□□ 2.65
CFD-201ENST00000327726 RIMS2Q9UQ26 1411 aa31.61■■■□□ 2.65
CFD-201ENST00000327726 CHGAP10645 457 aaKnown RBP31.61■■■□□ 2.65
CFD-201ENST00000327726 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.6■■■□□ 2.65
CFD-201ENST00000327726 PLEKHG1Q9ULL1 1385 aa31.59■■■□□ 2.65
CFD-201ENST00000327726 MYO5BQ9ULV0 1848 aa31.59■■■□□ 2.65
CFD-201ENST00000327726 PROSER2Q86WR7 435 aaPredicted RBP31.53■■■□□ 2.64
CFD-201ENST00000327726 XIRP1Q702N8 1843 aaKnown RBP31.53■■■□□ 2.64
CFD-201ENST00000327726 TMEM94Q12767 1356 aa31.53■■■□□ 2.64
CFD-201ENST00000327726 ILDR2Q71H61 639 aa31.52■■■□□ 2.64
CFD-201ENST00000327726 NKTRP30414 1462 aaKnown RBP31.52■■■□□ 2.64
CFD-201ENST00000327726 NWD1Q149M9 1564 aa31.5■■■□□ 2.63
CFD-201ENST00000327726 SENP3Q9H4L4 574 aaPredicted RBP31.48■■■□□ 2.63
CFD-201ENST00000327726 NAIPQ13075 1403 aa31.48■■■□□ 2.63
CFD-201ENST00000327726 TBX22Q9Y458 520 aa31.47■■■□□ 2.63
CFD-201ENST00000327726 SPHKAPQ2M3C7 1700 aa31.44■■■□□ 2.62
CFD-201ENST00000327726 NUTM2DQ5VT03 806 aaPredicted RBP31.42■■■□□ 2.62
CFD-201ENST00000327726 CHD2O14647 1828 aaKnown RBP31.41■■■□□ 2.62
CFD-201ENST00000327726 HFM1A2PYH4 1435 aa31.41■■■□□ 2.62
CFD-201ENST00000327726 DIP2AQ14689 1571 aa31.4■■■□□ 2.62
CFD-201ENST00000327726 MED1Q15648 1581 aaPredicted RBP31.4■■■□□ 2.62
CFD-201ENST00000327726 FAM135BQ49AJ0 1406 aa31.4■■■□□ 2.62
CFD-201ENST00000327726 RBM33Q96EV2 1170 aaKnown RBP31.39■■■□□ 2.62
CFD-201ENST00000327726 MSH6P52701 1360 aa31.39■■■□□ 2.62
CFD-201ENST00000327726 ADAMTS13Q76LX8 1427 aa31.38■■■□□ 2.61
CFD-201ENST00000327726 PIK3R4Q99570 1358 aa31.37■■■□□ 2.61
CFD-201ENST00000327726 SOCS7O14512 581 aa31.36■■■□□ 2.61
CFD-201ENST00000327726 TRIM52Q96A61 297 aa31.36■■■□□ 2.61
CFD-201ENST00000327726 ZNF326Q5BKZ1 582 aaKnown RBP31.35■■■□□ 2.61
CFD-201ENST00000327726 NCOA3Q9Y6Q9 1424 aa31.32■■■□□ 2.61
CFD-201ENST00000327726 TRPM2O94759 1503 aa31.32■■■□□ 2.6
CFD-201ENST00000327726 CLTCL1P53675 1640 aa31.27■■■□□ 2.6
CFD-201ENST00000327726 PHF23Q9BUL5 403 aaPredicted RBP31.27■■■□□ 2.6
CFD-201ENST00000327726 SLAIN2Q9P270 581 aa31.27■■■□□ 2.6
CFD-201ENST00000327726 ROBO1Q9Y6N7 1651 aa31.26■■■□□ 2.6
CFD-201ENST00000327726 C14orf37Q86TY3 774 aa31.26■■■□□ 2.59
CFD-201ENST00000327726 SLC4A1APQ9BWU0 796 aaKnown RBP31.26■■■□□ 2.59
CFD-201ENST00000327726 SETBP1Q9Y6X0 1596 aa31.25■■■□□ 2.59
CFD-201ENST00000327726 AMOTL2Q9Y2J4 779 aa31.24■■■□□ 2.59
CFD-201ENST00000327726 KIF1BO60333 1816 aa31.22■■■□□ 2.59
CFD-201ENST00000327726 C19orf44Q9H6X5 657 aa31.2■■■□□ 2.59
CFD-201ENST00000327726 NRXN3Q9Y4C0 1643 aa31.2■■■□□ 2.58
CFD-201ENST00000327726 PTPRUQ92729 1446 aa31.19■■■□□ 2.58
CFD-201ENST00000327726 NEXMIFQ5QGS0 1516 aa31.19■■■□□ 2.58
CFD-201ENST00000327726 CADPS2Q86UW7 1296 aa31.18■■■□□ 2.58
CFD-201ENST00000327726 ATF3P18847 181 aa31.16■■■□□ 2.58
CFD-201ENST00000327726 VGFO15240 615 aaPredicted RBP31.13■■■□□ 2.57
CFD-201ENST00000327726 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.12■■■□□ 2.57
CFD-201ENST00000327726 RPGRIP1LQ68CZ1 1315 aa31.12■■■□□ 2.57
CFD-201ENST00000327726 XRN1Q8IZH2 1706 aaKnown RBP31.12■■■□□ 2.57
CFD-201ENST00000327726 METP08581 1390 aa31.11■■■□□ 2.57
CFD-201ENST00000327726 DCCP43146 1447 aa31.08■■■□□ 2.57
CFD-201ENST00000327726 ACIN1Q9UKV3 1341 aaKnown RBP31.08■■■□□ 2.57
CFD-201ENST00000327726 PHLPP1O60346 1717 aa31.08■■■□□ 2.57
CFD-201ENST00000327726 FOXD1Q16676 465 aa31.04■■■□□ 2.56
CFD-201ENST00000327726 MPHOSPH9Q99550 1183 aa31.03■■■□□ 2.56
CFD-201ENST00000327726 JCADQ9P266 1359 aa31.03■■■□□ 2.56
CFD-201ENST00000327726 CCDC144AA2RUR9 1427 aa31.02■■■□□ 2.56
CFD-201ENST00000327726 COL16A1Q07092 1604 aaPredicted RBP30.98■■■□□ 2.55
CFD-201ENST00000327726 PPLO60437 1756 aa30.97■■■□□ 2.55
CFD-201ENST00000327726 AHDC1Q5TGY3 1603 aaPredicted RBP30.97■■■□□ 2.55
CFD-201ENST00000327726 ADGRL3Q9HAR2 1447 aa30.97■■■□□ 2.55
CFD-201ENST00000327726 BRINP3Q76B58 766 aa30.95■■■□□ 2.55
CFD-201ENST00000327726 RGS17Q9UGC6 210 aaPredicted RBP30.95■■■□□ 2.55
CFD-201ENST00000327726 SETD5Q9C0A6 1442 aa30.95■■■□□ 2.54
CFD-201ENST00000327726 PTCH1Q13635 1447 aa30.94■■■□□ 2.54
CFD-201ENST00000327726 SETD1AO15047 1707 aaKnown RBP30.93■■■□□ 2.54
CFD-201ENST00000327726 MST1RQ04912 1400 aa30.92■■■□□ 2.54
CFD-201ENST00000327726 RGL3Q3MIN7 710 aa30.9■■■□□ 2.54
CFD-201ENST00000327726 SPATA31A6Q5VVP1 1343 aa30.9■■■□□ 2.54
CFD-201ENST00000327726 ANKRD30BQ9BXX2 1392 aa30.89■■■□□ 2.54
CFD-201ENST00000327726 SPATA31E1Q6ZUB1 1445 aa30.89■■■□□ 2.53
CFD-201ENST00000327726 PRAG1Q86YV5 1406 aa30.89■■■□□ 2.53
CFD-201ENST00000327726 ASXL1Q8IXJ9 1541 aa30.88■■■□□ 2.53
CFD-201ENST00000327726 NALCNQ8IZF0 1738 aa30.87■■■□□ 2.53
CFD-201ENST00000327726 ROBO2Q9HCK4 1378 aa30.86■■■□□ 2.53
CFD-201ENST00000327726 ADGRF5Q8IZF2 1346 aa30.84■■■□□ 2.53
CFD-201ENST00000327726 SHPRHQ149N8 1683 aa30.83■■■□□ 2.53
CFD-201ENST00000327726 RAB3GAP2Q9H2M9 1393 aa30.81■■■□□ 2.52
CFD-201ENST00000327726 MEX3CQ5U5Q3 659 aaKnown RBP30.8■■■□□ 2.52
CFD-201ENST00000327726 POTEAQ6S8J7 498 aa30.8■■■□□ 2.52
CFD-201ENST00000327726 IFT172Q9UG01 1749 aa30.79■■■□□ 2.52
CFD-201ENST00000327726 NHSL1Q5SYE7 1610 aa30.79■■■□□ 2.52
CFD-201ENST00000327726 LRRC59Q96AG4 307 aaKnown RBP30.78■■■□□ 2.52
CFD-201ENST00000327726 C1orf167Q5SNV9 1468 aa30.77■■■□□ 2.52
CFD-201ENST00000327726 LRP6O75581 1613 aa30.75■■■□□ 2.51
CFD-201ENST00000327726 PIK3C2GO75747 1445 aa30.73■■■□□ 2.51
CFD-201ENST00000327726 LRPPRCP42704 1394 aaKnown RBP30.71■■■□□ 2.51
CFD-201ENST00000327726 STK26Q9P289 416 aa30.71■■■□□ 2.51
CFD-201ENST00000327726 TECPR2O15040 1411 aa30.71■■■□□ 2.51
CFD-201ENST00000327726 ABCC11Q96J66 1382 aa30.69■■■□□ 2.5
CFD-201ENST00000327726 NUTM2BA6NNL0 878 aaPredicted RBP30.69■■■□□ 2.5
CFD-201ENST00000327726 NUTM2EB1AL46 878 aaPredicted RBP30.69■■■□□ 2.5
CFD-201ENST00000327726 ZNF772Q68DY9 489 aaPredicted RBP30.69■■■□□ 2.5
CFD-201ENST00000327726 NUTM2AQ8IVF1 878 aaPredicted RBP30.69■■■□□ 2.5
CFD-201ENST00000327726 DDX17Q92841 729 aaKnown RBP30.69■■■□□ 2.5
CFD-201ENST00000327726 TMEM132EQ6IEE7 984 aa30.67■■■□□ 2.5
CFD-201ENST00000327726 ORAI2Q96SN7 254 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms