RNA–Protein interactions for RNA: ENST00000326597.6

GGA1-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-202ENST00000326597 ADGRB3O60242 1522 aa23.63■■□□□ 1.37
GGA1-202ENST00000326597 CHGAP10645 457 aaKnown RBP23.62■■□□□ 1.37
GGA1-202ENST00000326597 NUTM2DQ5VT03 806 aaPredicted RBP23.62■■□□□ 1.37
GGA1-202ENST00000326597 ROBO1Q9Y6N7 1651 aa23.61■■□□□ 1.37
GGA1-202ENST00000326597 C14orf37Q86TY3 774 aa23.59■■□□□ 1.37
GGA1-202ENST00000326597 ANKRD50Q9ULJ7 1429 aa23.58■■□□□ 1.36
GGA1-202ENST00000326597 RIMS2Q9UQ26 1411 aa23.58■■□□□ 1.36
GGA1-202ENST00000326597 NKTRP30414 1462 aaKnown RBP23.57■■□□□ 1.36
GGA1-202ENST00000326597 PLEKHG1Q9ULL1 1385 aa23.56■■□□□ 1.36
GGA1-202ENST00000326597 KDM5AP29375 1690 aaKnown RBP23.56■■□□□ 1.36
GGA1-202ENST00000326597 ZFYVE9O95405 1425 aa23.56■■□□□ 1.36
GGA1-202ENST00000326597 HDGFP51858 240 aaKnown RBP23.55■■□□□ 1.36
GGA1-202ENST00000326597 ADGRL2O95490 1459 aa23.54■■□□□ 1.36
GGA1-202ENST00000326597 JCADQ9P266 1359 aa23.53■■□□□ 1.36
GGA1-202ENST00000326597 NWD1Q149M9 1564 aa23.53■■□□□ 1.36
GGA1-202ENST00000326597 TBX22Q9Y458 520 aa23.52■■□□□ 1.36
GGA1-202ENST00000326597 RPRD2Q5VT52 1461 aaKnown RBP23.5■■□□□ 1.35
GGA1-202ENST00000326597 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.49■■□□□ 1.35
GGA1-202ENST00000326597 MEX3CQ5U5Q3 659 aaKnown RBP23.48■■□□□ 1.35
GGA1-202ENST00000326597 ATF3P18847 181 aa23.46■■□□□ 1.35
GGA1-202ENST00000326597 PHLPP1O60346 1717 aa23.45■■□□□ 1.34
GGA1-202ENST00000326597 ADAMTS13Q76LX8 1427 aa23.44■■□□□ 1.34
GGA1-202ENST00000326597 ITGAEP38570 1179 aa23.44■■□□□ 1.34
GGA1-202ENST00000326597 C19orf44Q9H6X5 657 aa23.44■■□□□ 1.34
GGA1-202ENST00000326597 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
GGA1-202ENST00000326597 CADPS2Q86UW7 1296 aa23.43■■□□□ 1.34
GGA1-202ENST00000326597 TRIM52Q96A61 297 aa23.43■■□□□ 1.34
GGA1-202ENST00000326597 AMOTL2Q9Y2J4 779 aa23.42■■□□□ 1.34
GGA1-202ENST00000326597 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
GGA1-202ENST00000326597 LRP6O75581 1613 aa23.41■■□□□ 1.34
GGA1-202ENST00000326597 NUTM2BA6NNL0 878 aaPredicted RBP23.41■■□□□ 1.34
GGA1-202ENST00000326597 NUTM2EB1AL46 878 aaPredicted RBP23.41■■□□□ 1.34
GGA1-202ENST00000326597 NUTM2AQ8IVF1 878 aaPredicted RBP23.41■■□□□ 1.34
GGA1-202ENST00000326597 SETD1AO15047 1707 aaKnown RBP23.39■■□□□ 1.34
GGA1-202ENST00000326597 SPATA31A6Q5VVP1 1343 aa23.39■■□□□ 1.34
GGA1-202ENST00000326597 MYO5BQ9ULV0 1848 aa23.39■■□□□ 1.33
GGA1-202ENST00000326597 NUP155O75694 1391 aa23.39■■□□□ 1.33
GGA1-202ENST00000326597 CHD2O14647 1828 aaKnown RBP23.38■■□□□ 1.33
GGA1-202ENST00000326597 COL16A1Q07092 1604 aaPredicted RBP23.38■■□□□ 1.33
GGA1-202ENST00000326597 NCOA3Q9Y6Q9 1424 aa23.38■■□□□ 1.33
GGA1-202ENST00000326597 ZNF772Q68DY9 489 aaPredicted RBP23.37■■□□□ 1.33
GGA1-202ENST00000326597 BRINP3Q76B58 766 aa23.37■■□□□ 1.33
GGA1-202ENST00000326597 PTPRUQ92729 1446 aa23.36■■□□□ 1.33
GGA1-202ENST00000326597 PPARGC1BQ86YN6 1023 aaKnown RBP23.35■■□□□ 1.33
GGA1-202ENST00000326597 PIK3R4Q99570 1358 aa23.34■■□□□ 1.33
GGA1-202ENST00000326597 UNC13BO14795 1591 aa23.33■■□□□ 1.33
GGA1-202ENST00000326597 ZNF326Q5BKZ1 582 aaKnown RBP23.33■■□□□ 1.33
GGA1-202ENST00000326597 UPF1Q92900 1129 aaKnown RBP eCLIP23.32■■□□□ 1.32
GGA1-202ENST00000326597 E9PCH4 1651 aa23.32■■□□□ 1.32
GGA1-202ENST00000326597 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.3■■□□□ 1.32
GGA1-202ENST00000326597 ROCK1Q13464 1354 aa23.3■■□□□ 1.32
GGA1-202ENST00000326597 RXRBP28702 533 aa23.3■■□□□ 1.32
GGA1-202ENST00000326597 DDX17Q92841 729 aaKnown RBP23.29■■□□□ 1.32
GGA1-202ENST00000326597 DIP2AQ14689 1571 aa23.28■■□□□ 1.32
GGA1-202ENST00000326597 AHDC1Q5TGY3 1603 aaPredicted RBP23.28■■□□□ 1.32
GGA1-202ENST00000326597 TRPM2O94759 1503 aa23.28■■□□□ 1.32
GGA1-202ENST00000326597 AFF2P51816 1311 aa23.26■■□□□ 1.31
GGA1-202ENST00000326597 METP08581 1390 aa23.26■■□□□ 1.31
GGA1-202ENST00000326597 IQGAP3Q86VI3 1631 aa23.24■■□□□ 1.31
GGA1-202ENST00000326597 C8orf37Q96NL8 207 aa23.23■■□□□ 1.31
GGA1-202ENST00000326597 MST1RQ04912 1400 aa23.22■■□□□ 1.31
GGA1-202ENST00000326597 ASXL1Q8IXJ9 1541 aa23.22■■□□□ 1.31
GGA1-202ENST00000326597 LRRC59Q96AG4 307 aaKnown RBP23.2■■□□□ 1.3
GGA1-202ENST00000326597 SHPRHQ149N8 1683 aa23.19■■□□□ 1.3
GGA1-202ENST00000326597 DCCP43146 1447 aa23.19■■□□□ 1.3
GGA1-202ENST00000326597 SETD5Q9C0A6 1442 aa23.17■■□□□ 1.3
GGA1-202ENST00000326597 ADAMTS2O95450 1211 aa23.17■■□□□ 1.3
GGA1-202ENST00000326597 QTRT2Q9H974 415 aaKnown RBP23.17■■□□□ 1.3
GGA1-202ENST00000326597 NRXN3Q9Y4C0 1643 aa23.16■■□□□ 1.3
GGA1-202ENST00000326597 SETBP1Q9Y6X0 1596 aa23.14■■□□□ 1.3
GGA1-202ENST00000326597 PNPLA6Q8IY17 1366 aa23.14■■□□□ 1.29
GGA1-202ENST00000326597 XRN1Q8IZH2 1706 aaKnown RBP23.13■■□□□ 1.29
GGA1-202ENST00000326597 ADGRL3Q9HAR2 1447 aa23.13■■□□□ 1.29
GGA1-202ENST00000326597 NGLY1Q96IV0 654 aa23.12■■□□□ 1.29
GGA1-202ENST00000326597 ORAI2Q96SN7 254 aa23.11■■□□□ 1.29
GGA1-202ENST00000326597 RBM6P78332 1123 aaKnown RBP23.1■■□□□ 1.29
GGA1-202ENST00000326597 RGS12O14924 1447 aa23.08■■□□□ 1.29
GGA1-202ENST00000326597 CDK12Q9NYV4 1490 aaPredicted RBP23.08■■□□□ 1.29
GGA1-202ENST00000326597 C1orf167Q5SNV9 1468 aa23.07■■□□□ 1.28
GGA1-202ENST00000326597 ROBO2Q9HCK4 1378 aa23.06■■□□□ 1.28
GGA1-202ENST00000326597 NEXMIFQ5QGS0 1516 aa23.06■■□□□ 1.28
GGA1-202ENST00000326597 SPHKAPQ2M3C7 1700 aa23.05■■□□□ 1.28
GGA1-202ENST00000326597 NHSL1Q5SYE7 1610 aa23.05■■□□□ 1.28
GGA1-202ENST00000326597 CLTCL1P53675 1640 aa23.04■■□□□ 1.28
GGA1-202ENST00000326597 SRCAPQ6ZRS2 3230 aa23.04■■□□□ 1.28
GGA1-202ENST00000326597 USP21Q9UK80 565 aa23.03■■□□□ 1.28
GGA1-202ENST00000326597 VGFO15240 615 aaPredicted RBP23.02■■□□□ 1.28
GGA1-202ENST00000326597 NALCNQ8IZF0 1738 aa23■■□□□ 1.27
GGA1-202ENST00000326597 SOS2Q07890 1332 aaPredicted RBP23■■□□□ 1.27
GGA1-202ENST00000326597 XPCQ01831 940 aaPredicted RBP22.97■■□□□ 1.27
GGA1-202ENST00000326597 NAIPQ13075 1403 aa22.97■■□□□ 1.27
GGA1-202ENST00000326597 PTCH1Q13635 1447 aa22.97■■□□□ 1.27
GGA1-202ENST00000326597 ESCO1Q5FWF5 840 aa22.96■■□□□ 1.27
GGA1-202ENST00000326597 TRPC5Q9UL62 973 aaPredicted RBP22.96■■□□□ 1.27
GGA1-202ENST00000326597 FOXD1Q16676 465 aa22.95■■□□□ 1.26
GGA1-202ENST00000326597 SLC4A1APQ9BWU0 796 aaKnown RBP22.95■■□□□ 1.26
GGA1-202ENST00000326597 NUTM2FA1L443 756 aa22.94■■□□□ 1.26
GGA1-202ENST00000326597 FNBP4Q8N3X1 1017 aaPredicted RBP22.93■■□□□ 1.26
GGA1-202ENST00000326597 STK26Q9P289 416 aa22.93■■□□□ 1.26
GGA1-202ENST00000326597 ATAD2Q6PL18 1390 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms