RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 TMEM131LA2VDJ0 1609 aa12.47□□□□□ -0.41
CCNC-201ENST00000326298 NUP155O75694 1391 aa12.47□□□□□ -0.41
CCNC-201ENST00000326298 GCC2Q8IWJ2 1684 aa12.47□□□□□ -0.41
CCNC-201ENST00000326298 IQGAP3Q86VI3 1631 aa12.46□□□□□ -0.42
CCNC-201ENST00000326298 TMEM94Q12767 1356 aa12.46□□□□□ -0.42
CCNC-201ENST00000326298 CHGAP10645 457 aaKnown RBP12.45□□□□□ -0.42
CCNC-201ENST00000326298 RIMS2Q9UQ26 1411 aa12.45□□□□□ -0.42
CCNC-201ENST00000326298 KCNA6P17658 529 aa12.44□□□□□ -0.42
CCNC-201ENST00000326298 RRBP1Q9P2E9 1410 aaKnown RBP12.43□□□□□ -0.42
CCNC-201ENST00000326298 BCANQ96GW7 911 aa12.43□□□□□ -0.42
CCNC-201ENST00000326298 MED1Q15648 1581 aaPredicted RBP12.43□□□□□ -0.42
CCNC-201ENST00000326298 PLEKHG1Q9ULL1 1385 aa12.41□□□□□ -0.42
CCNC-201ENST00000326298 PROSER2Q86WR7 435 aaPredicted RBP12.41□□□□□ -0.42
CCNC-201ENST00000326298 NAIPQ13075 1403 aa12.41□□□□□ -0.42
CCNC-201ENST00000326298 ADAMTS13Q76LX8 1427 aa12.41□□□□□ -0.42
CCNC-201ENST00000326298 SOCS7O14512 581 aa12.4□□□□□ -0.42
CCNC-201ENST00000326298 PPP1R15AO75807 674 aaPredicted RBP12.4□□□□□ -0.42
CCNC-201ENST00000326298 NWD1Q149M9 1564 aa12.4□□□□□ -0.42
CCNC-201ENST00000326298 CHD2O14647 1828 aaKnown RBP12.38□□□□□ -0.43
CCNC-201ENST00000326298 PTPRUQ92729 1446 aa12.37□□□□□ -0.43
CCNC-201ENST00000326298 TBX22Q9Y458 520 aa12.36□□□□□ -0.43
CCNC-201ENST00000326298 NKTRP30414 1462 aaKnown RBP12.36□□□□□ -0.43
CCNC-201ENST00000326298 SPHKAPQ2M3C7 1700 aa12.35□□□□□ -0.43
CCNC-201ENST00000326298 ROBO1Q9Y6N7 1651 aa12.35□□□□□ -0.43
CCNC-201ENST00000326298 FAM135BQ49AJ0 1406 aa12.35□□□□□ -0.43
CCNC-201ENST00000326298 NRXN3Q9Y4C0 1643 aa12.35□□□□□ -0.43
CCNC-201ENST00000326298 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
CCNC-201ENST00000326298 CLTCL1P53675 1640 aa12.35□□□□□ -0.43
CCNC-201ENST00000326298 FOXD1Q16676 465 aa12.34□□□□□ -0.43
CCNC-201ENST00000326298 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCNC-201ENST00000326298 SLAIN2Q9P270 581 aa12.33□□□□□ -0.44
CCNC-201ENST00000326298 METP08581 1390 aa12.32□□□□□ -0.44
CCNC-201ENST00000326298 HFM1A2PYH4 1435 aa12.32□□□□□ -0.44
CCNC-201ENST00000326298 ZNF326Q5BKZ1 582 aaKnown RBP12.32□□□□□ -0.44
CCNC-201ENST00000326298 AMOTL2Q9Y2J4 779 aa12.32□□□□□ -0.44
CCNC-201ENST00000326298 MSH6P52701 1360 aa12.32□□□□□ -0.44
CCNC-201ENST00000326298 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
CCNC-201ENST00000326298 POTEDQ86YR6 584 aa12.31□□□□□ -0.44
CCNC-201ENST00000326298 TRIM52Q96A61 297 aa12.31□□□□□ -0.44
CCNC-201ENST00000326298 NEXMIFQ5QGS0 1516 aa12.3□□□□□ -0.44
CCNC-201ENST00000326298 TRPM2O94759 1503 aa12.3□□□□□ -0.44
CCNC-201ENST00000326298 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.29□□□□□ -0.44
CCNC-201ENST00000326298 PHF23Q9BUL5 403 aaPredicted RBP12.29□□□□□ -0.44
CCNC-201ENST00000326298 SETBP1Q9Y6X0 1596 aa12.28□□□□□ -0.44
CCNC-201ENST00000326298 C14orf37Q86TY3 774 aa12.28□□□□□ -0.44
CCNC-201ENST00000326298 SLC4A1APQ9BWU0 796 aaKnown RBP12.28□□□□□ -0.44
CCNC-201ENST00000326298 DIP2AQ14689 1571 aa12.28□□□□□ -0.44
CCNC-201ENST00000326298 XRN1Q8IZH2 1706 aaKnown RBP12.27□□□□□ -0.45
CCNC-201ENST00000326298 PIK3R4Q99570 1358 aa12.27□□□□□ -0.45
CCNC-201ENST00000326298 C19orf44Q9H6X5 657 aa12.26□□□□□ -0.45
CCNC-201ENST00000326298 POTEAQ6S8J7 498 aa12.25□□□□□ -0.45
CCNC-201ENST00000326298 PHLPP1O60346 1717 aa12.25□□□□□ -0.45
CCNC-201ENST00000326298 COL16A1Q07092 1604 aaPredicted RBP12.25□□□□□ -0.45
CCNC-201ENST00000326298 DDX17Q92841 729 aaKnown RBP12.25□□□□□ -0.45
CCNC-201ENST00000326298 NCOA3Q9Y6Q9 1424 aa12.24□□□□□ -0.45
CCNC-201ENST00000326298 KIF1BO60333 1816 aa12.24□□□□□ -0.45
CCNC-201ENST00000326298 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
CCNC-201ENST00000326298 ATF3P18847 181 aa12.23□□□□□ -0.45
CCNC-201ENST00000326298 SETD1AO15047 1707 aaKnown RBP12.23□□□□□ -0.45
CCNC-201ENST00000326298 CADPS2Q86UW7 1296 aa12.22□□□□□ -0.45
CCNC-201ENST00000326298 LRP6O75581 1613 aa12.22□□□□□ -0.45
CCNC-201ENST00000326298 MST1RQ04912 1400 aa12.21□□□□□ -0.45
CCNC-201ENST00000326298 ROBO2Q9HCK4 1378 aa12.21□□□□□ -0.45
CCNC-201ENST00000326298 NALCNQ8IZF0 1738 aa12.21□□□□□ -0.46
CCNC-201ENST00000326298 MPHOSPH9Q99550 1183 aa12.21□□□□□ -0.46
CCNC-201ENST00000326298 ADGRF5Q8IZF2 1346 aa12.2□□□□□ -0.46
CCNC-201ENST00000326298 RGL3Q3MIN7 710 aa12.2□□□□□ -0.46
CCNC-201ENST00000326298 JCADQ9P266 1359 aa12.19□□□□□ -0.46
CCNC-201ENST00000326298 PPLO60437 1756 aa12.19□□□□□ -0.46
CCNC-201ENST00000326298 AHDC1Q5TGY3 1603 aaPredicted RBP12.18□□□□□ -0.46
CCNC-201ENST00000326298 SPATA31E1Q6ZUB1 1445 aa12.18□□□□□ -0.46
CCNC-201ENST00000326298 ADGRL3Q9HAR2 1447 aa12.18□□□□□ -0.46
CCNC-201ENST00000326298 ASXL1Q8IXJ9 1541 aa12.18□□□□□ -0.46
CCNC-201ENST00000326298 VGFO15240 615 aaPredicted RBP12.18□□□□□ -0.46
CCNC-201ENST00000326298 DCCP43146 1447 aa12.17□□□□□ -0.46
CCNC-201ENST00000326298 ORAI2Q96SN7 254 aa12.16□□□□□ -0.46
CCNC-201ENST00000326298 TMEM132EQ6IEE7 984 aa12.15□□□□□ -0.46
CCNC-201ENST00000326298 RPGRIP1LQ68CZ1 1315 aa12.15□□□□□ -0.46
CCNC-201ENST00000326298 CCDC144AA2RUR9 1427 aa12.15□□□□□ -0.46
CCNC-201ENST00000326298 NUTM2BA6NNL0 878 aaPredicted RBP12.14□□□□□ -0.47
CCNC-201ENST00000326298 NUTM2EB1AL46 878 aaPredicted RBP12.14□□□□□ -0.47
CCNC-201ENST00000326298 NUTM2AQ8IVF1 878 aaPredicted RBP12.14□□□□□ -0.47
CCNC-201ENST00000326298 PTCH1Q13635 1447 aa12.14□□□□□ -0.47
CCNC-201ENST00000326298 C1orf167Q5SNV9 1468 aa12.14□□□□□ -0.47
CCNC-201ENST00000326298 WAPLQ7Z5K2 1190 aa12.14□□□□□ -0.47
CCNC-201ENST00000326298 STK26Q9P289 416 aa12.14□□□□□ -0.47
CCNC-201ENST00000326298 SETD5Q9C0A6 1442 aa12.14□□□□□ -0.47
CCNC-201ENST00000326298 NHSL1Q5SYE7 1610 aa12.14□□□□□ -0.47
CCNC-201ENST00000326298 RAB3GAP2Q9H2M9 1393 aa12.13□□□□□ -0.47
CCNC-201ENST00000326298 PLEKHH1Q9ULM0 1364 aa12.13□□□□□ -0.47
CCNC-201ENST00000326298 SHPRHQ149N8 1683 aa12.13□□□□□ -0.47
CCNC-201ENST00000326298 IFT172Q9UG01 1749 aa12.13□□□□□ -0.47
CCNC-201ENST00000326298 SPATA31A6Q5VVP1 1343 aa12.11□□□□□ -0.47
CCNC-201ENST00000326298 PRAG1Q86YV5 1406 aa12.11□□□□□ -0.47
CCNC-201ENST00000326298 NUTM2FA1L443 756 aa12.11□□□□□ -0.47
CCNC-201ENST00000326298 SRCAPQ6ZRS2 3230 aa12.11□□□□□ -0.47
CCNC-201ENST00000326298 PIK3C2GO75747 1445 aa12.1□□□□□ -0.47
CCNC-201ENST00000326298 PNPLA6Q8IY17 1366 aa12.09□□□□□ -0.47
CCNC-201ENST00000326298 MEX3CQ5U5Q3 659 aaKnown RBP12.09□□□□□ -0.47
CCNC-201ENST00000326298 XPCQ01831 940 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms