RNA–Protein interactions for RNA: ENST00000325942.10

FRAS1-201, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene FRAS1, Length 7,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-201ENST00000325942 PKD2Q13563 968 aa11.77□□□□□ -0.52
FRAS1-201ENST00000325942 TERF2IPQ9NYB0 399 aa11.77□□□□□ -0.53
FRAS1-201ENST00000325942 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
FRAS1-201ENST00000325942 E9PSI1 815 aa11.77□□□□□ -0.53
FRAS1-201ENST00000325942 PSMD1Q99460 953 aa11.77□□□□□ -0.53
FRAS1-201ENST00000325942 COG3Q96JB2 828 aa11.76□□□□□ -0.53
FRAS1-201ENST00000325942 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
FRAS1-201ENST00000325942 RSPH4AQ5TD94 716 aa11.76□□□□□ -0.53
FRAS1-201ENST00000325942 ESCO1Q5FWF5 840 aa11.75□□□□□ -0.53
FRAS1-201ENST00000325942 RRP12Q5JTH9 1297 aaKnown RBP11.75□□□□□ -0.53
FRAS1-201ENST00000325942 WASHC4Q2M389 1173 aa11.75□□□□□ -0.53
FRAS1-201ENST00000325942 RIC3Q7Z5B4 369 aa11.75□□□□□ -0.53
FRAS1-201ENST00000325942 TNNT3P45378 269 aaPredicted RBP11.74□□□□□ -0.53
FRAS1-201ENST00000325942 ANO2Q9NQ90 1003 aa11.74□□□□□ -0.53
FRAS1-201ENST00000325942 TTLL5Q6EMB2 1281 aa11.74□□□□□ -0.53
FRAS1-201ENST00000325942 ADAMTS2O95450 1211 aa11.73□□□□□ -0.53
FRAS1-201ENST00000325942 HMMRO75330 724 aa11.73□□□□□ -0.53
FRAS1-201ENST00000325942 RAPGEF4Q8WZA2 1011 aa11.73□□□□□ -0.53
FRAS1-201ENST00000325942 ZNF592Q92610 1267 aa11.73□□□□□ -0.53
FRAS1-201ENST00000325942 ZHX3Q9H4I2 956 aa11.72□□□□□ -0.53
FRAS1-201ENST00000325942 PDE3BQ13370 1112 aa11.72□□□□□ -0.53
FRAS1-201ENST00000325942 XPCQ01831 940 aaPredicted RBP11.72□□□□□ -0.53
FRAS1-201ENST00000325942 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
FRAS1-201ENST00000325942 KIF6Q6ZMV9 814 aa11.72□□□□□ -0.53
FRAS1-201ENST00000325942 PIBF1Q8WXW3 757 aa11.71□□□□□ -0.53
FRAS1-201ENST00000325942 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.53
FRAS1-201ENST00000325942 TRDNQ13061 729 aa11.71□□□□□ -0.53
FRAS1-201ENST00000325942 CPLX1O14810 134 aa11.71□□□□□ -0.54
FRAS1-201ENST00000325942 SCLT1Q96NL6 688 aa11.71□□□□□ -0.54
FRAS1-201ENST00000325942 NEBLO76041 1014 aa11.7□□□□□ -0.54
FRAS1-201ENST00000325942 IFIT2P09913 472 aaKnown RBP11.7□□□□□ -0.54
FRAS1-201ENST00000325942 VTI1AQ96AJ9 217 aa11.7□□□□□ -0.54
FRAS1-201ENST00000325942 ANKRD45Q5TZF3 282 aa11.69□□□□□ -0.54
FRAS1-201ENST00000325942 HOMER1Q86YM7 354 aa11.69□□□□□ -0.54
FRAS1-201ENST00000325942 ATP2B1P20020 1258 aa11.69□□□□□ -0.54
FRAS1-201ENST00000325942 CCDC47Q96A33 483 aaKnown RBP11.69□□□□□ -0.54
FRAS1-201ENST00000325942 DIAPH3Q9NSV4 1193 aa11.69□□□□□ -0.54
FRAS1-201ENST00000325942 ANKRD62A6NC57 917 aa11.69□□□□□ -0.54
FRAS1-201ENST00000325942 TPM1P09493 284 aa11.68□□□□□ -0.54
FRAS1-201ENST00000325942 HMOX1P09601 288 aa11.68□□□□□ -0.54
FRAS1-201ENST00000325942 EFCAB2Q5VUJ9 269 aa11.68□□□□□ -0.54
FRAS1-201ENST00000325942 TOM1L2Q6ZVM7 507 aa11.68□□□□□ -0.54
FRAS1-201ENST00000325942 PROSER2Q86WR7 435 aaPredicted RBP11.68□□□□□ -0.54
FRAS1-201ENST00000325942 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
FRAS1-201ENST00000325942 KTN1Q86UP2 1357 aaKnown RBP11.68□□□□□ -0.54
FRAS1-201ENST00000325942 TRMT1LQ7Z2T5 733 aaKnown RBP11.68□□□□□ -0.54
FRAS1-201ENST00000325942 PMFBP1Q8TBY8 1022 aa11.68□□□□□ -0.54
FRAS1-201ENST00000325942 GOLGA6L19H0YKK7 550 aa11.67□□□□□ -0.54
FRAS1-201ENST00000325942 KRT18P05783 430 aaKnown RBP11.67□□□□□ -0.54
FRAS1-201ENST00000325942 STAC3Q96MF2 364 aa11.67□□□□□ -0.54
FRAS1-201ENST00000325942 WASHC2AQ641Q2 1341 aa11.66□□□□□ -0.54
FRAS1-201ENST00000325942 SYAP1Q96A49 352 aaPredicted RBP11.66□□□□□ -0.54
FRAS1-201ENST00000325942 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
FRAS1-201ENST00000325942 GBP4Q96PP9 640 aa11.66□□□□□ -0.54
FRAS1-201ENST00000325942 CNNM1Q9NRU3 951 aa11.66□□□□□ -0.54
FRAS1-201ENST00000325942 PHF14O94880 888 aa11.65□□□□□ -0.54
FRAS1-201ENST00000325942 RWDD1Q9H446 243 aaPredicted RBP11.65□□□□□ -0.54
FRAS1-201ENST00000325942 NUP155O75694 1391 aa11.65□□□□□ -0.54
FRAS1-201ENST00000325942 PRDM2Q13029 1718 aa11.65□□□□□ -0.54
FRAS1-201ENST00000325942 NOP58Q9Y2X3 529 aaKnown RBP11.65□□□□□ -0.54
FRAS1-201ENST00000325942 PTMSP20962 102 aa11.65□□□□□ -0.54
FRAS1-201ENST00000325942 CSPP1Q1MSJ5 1256 aa11.65□□□□□ -0.55
FRAS1-201ENST00000325942 CDK5RAP3Q96JB5 506 aa11.65□□□□□ -0.55
FRAS1-201ENST00000325942 DNAJC2Q99543 621 aaKnown RBP11.65□□□□□ -0.55
FRAS1-201ENST00000325942 ABTB2Q8N961 1025 aa11.64□□□□□ -0.55
FRAS1-201ENST00000325942 G3BP1Q13283 466 aaKnown RBP eCLIP11.64□□□□□ -0.55
FRAS1-201ENST00000325942 BECN2A8MW95 431 aa11.64□□□□□ -0.55
FRAS1-201ENST00000325942 CCDC85AQ96PX6 553 aaPredicted RBP11.64□□□□□ -0.55
FRAS1-201ENST00000325942 DRC1Q96MC2 740 aa11.63□□□□□ -0.55
FRAS1-201ENST00000325942 DDX58O95786 925 aaKnown RBP11.63□□□□□ -0.55
FRAS1-201ENST00000325942 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
FRAS1-201ENST00000325942 FKBP5Q13451 457 aaPredicted RBP11.63□□□□□ -0.55
FRAS1-201ENST00000325942 OFD1O75665 1012 aa11.63□□□□□ -0.55
FRAS1-201ENST00000325942 MYL6BP14649 208 aa11.63□□□□□ -0.55
FRAS1-201ENST00000325942 WDHD1O75717 1129 aaPredicted RBP11.63□□□□□ -0.55
FRAS1-201ENST00000325942 PDCL3Q9H2J4 239 aa11.63□□□□□ -0.55
FRAS1-201ENST00000325942 LMOD3Q0VAK6 560 aa11.62□□□□□ -0.55
FRAS1-201ENST00000325942 CCDC70Q6NSX1 233 aa11.62□□□□□ -0.55
FRAS1-201ENST00000325942 NEFHP12036 1026 aa11.62□□□□□ -0.55
FRAS1-201ENST00000325942 BRPF1P55201 1214 aaPredicted RBP11.62□□□□□ -0.55
FRAS1-201ENST00000325942 CARMIL2Q6F5E8 1435 aa11.62□□□□□ -0.55
FRAS1-201ENST00000325942 CHMP4AQ9BY43 222 aa11.62□□□□□ -0.55
FRAS1-201ENST00000325942 ZMYND15Q9H091 742 aa11.62□□□□□ -0.55
FRAS1-201ENST00000325942 TSPYL4Q9UJ04 414 aa11.62□□□□□ -0.55
FRAS1-201ENST00000325942 KIF3AQ9Y496 699 aa11.62□□□□□ -0.55
FRAS1-201ENST00000325942 LIG1P18858 919 aa11.62□□□□□ -0.55
FRAS1-201ENST00000325942 CPLX2Q6PUV4 134 aaKnown RBP11.62□□□□□ -0.55
FRAS1-201ENST00000325942 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
FRAS1-201ENST00000325942 USP5P45974 858 aa11.62□□□□□ -0.55
FRAS1-201ENST00000325942 LRRFIP1Q32MZ4 808 aaKnown RBP11.62□□□□□ -0.55
FRAS1-201ENST00000325942 SYCP1Q15431 976 aa11.61□□□□□ -0.55
FRAS1-201ENST00000325942 EIF3AQ14152 1382 aaKnown RBP11.61□□□□□ -0.55
FRAS1-201ENST00000325942 RB1CC1Q8TDY2 1594 aa11.61□□□□□ -0.55
FRAS1-201ENST00000325942 HSPA5P11021 654 aaKnown RBP11.61□□□□□ -0.55
FRAS1-201ENST00000325942 SLC4A8Q2Y0W8 1093 aa11.61□□□□□ -0.55
FRAS1-201ENST00000325942 SEPT11Q9NVA2 429 aaKnown RBP11.61□□□□□ -0.55
FRAS1-201ENST00000325942 EP400NLQ6ZTU2 488 aa11.61□□□□□ -0.55
FRAS1-201ENST00000325942 IPO7O95373 1038 aaKnown RBP11.6□□□□□ -0.55
FRAS1-201ENST00000325942 PDILTQ8N807 584 aa11.6□□□□□ -0.55
FRAS1-201ENST00000325942 RFX1P22670 979 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms