RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 CDC42BPBQ9Y5S2 1711 aa18.95■□□□□ 0.62
CUL1-201ENST00000325222 BCAR3O75815 825 aa18.95■□□□□ 0.62
CUL1-201ENST00000325222 IGHDP01880 384 aa18.94■□□□□ 0.62
CUL1-201ENST00000325222 UNC13BO14795 1591 aa18.94■□□□□ 0.62
CUL1-201ENST00000325222 NUP160Q12769 1436 aa18.94■□□□□ 0.62
CUL1-201ENST00000325222 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
CUL1-201ENST00000325222 KNSTRNQ9Y448 316 aa18.92■□□□□ 0.62
CUL1-201ENST00000325222 SEC24BO95487 1268 aa18.92■□□□□ 0.62
CUL1-201ENST00000325222 RNF17Q9BXT8 1623 aaKnown RBP18.91■□□□□ 0.62
CUL1-201ENST00000325222 EIF2AK4Q9P2K8 1649 aaKnown RBP18.91■□□□□ 0.62
CUL1-201ENST00000325222 SYCP2Q9BX26 1530 aa18.9■□□□□ 0.62
CUL1-201ENST00000325222 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.89■□□□□ 0.62
CUL1-201ENST00000325222 CLASP1Q7Z460 1538 aa18.89■□□□□ 0.62
CUL1-201ENST00000325222 APAF1O14727 1248 aa18.89■□□□□ 0.61
CUL1-201ENST00000325222 PREX2Q70Z35 1606 aa18.88■□□□□ 0.61
CUL1-201ENST00000325222 EIF3AQ14152 1382 aaKnown RBP18.88■□□□□ 0.61
CUL1-201ENST00000325222 IQGAP3Q86VI3 1631 aa18.88■□□□□ 0.61
CUL1-201ENST00000325222 POGKQ9P215 609 aa18.86■□□□□ 0.61
CUL1-201ENST00000325222 ATP10AO60312 1499 aa18.85■□□□□ 0.61
CUL1-201ENST00000325222 PIK3C2GO75747 1445 aa18.85■□□□□ 0.61
CUL1-201ENST00000325222 RSPH4AQ5TD94 716 aa18.85■□□□□ 0.61
CUL1-201ENST00000325222 NKTRP30414 1462 aaKnown RBP18.85■□□□□ 0.61
CUL1-201ENST00000325222 ASXL1Q8IXJ9 1541 aa18.84■□□□□ 0.61
CUL1-201ENST00000325222 VSIG10Q8N0Z9 540 aa18.83■□□□□ 0.61
CUL1-201ENST00000325222 MAST1Q9Y2H9 1570 aa18.83■□□□□ 0.6
CUL1-201ENST00000325222 IQGAP1P46940 1657 aa18.83■□□□□ 0.6
CUL1-201ENST00000325222 RSPH6AQ9H0K4 717 aa18.82■□□□□ 0.6
CUL1-201ENST00000325222 MADDQ8WXG6 1647 aa18.82■□□□□ 0.6
CUL1-201ENST00000325222 NLRP1Q9C000 1473 aa18.81■□□□□ 0.6
CUL1-201ENST00000325222 PANK1Q8TE04 598 aa18.81■□□□□ 0.6
CUL1-201ENST00000325222 SYNMO15061 1565 aa18.81■□□□□ 0.6
CUL1-201ENST00000325222 MYOM1P52179 1685 aa18.81■□□□□ 0.6
CUL1-201ENST00000325222 TTC37Q6PGP7 1564 aa18.81■□□□□ 0.6
CUL1-201ENST00000325222 VIRMAQ69YN4 1812 aaKnown RBP18.81■□□□□ 0.6
CUL1-201ENST00000325222 GLIPR1L2Q4G1C9 344 aa18.8■□□□□ 0.6
CUL1-201ENST00000325222 ABCC2Q92887 1545 aa18.8■□□□□ 0.6
CUL1-201ENST00000325222 COG6Q9Y2V7 657 aa18.79■□□□□ 0.6
CUL1-201ENST00000325222 ARHGAP5Q13017 1502 aa18.79■□□□□ 0.6
CUL1-201ENST00000325222 SLKQ9H2G2 1235 aaPredicted RBP18.78■□□□□ 0.6
CUL1-201ENST00000325222 E9PSI1 815 aa18.78■□□□□ 0.6
CUL1-201ENST00000325222 FAM43AQ8N2R8 423 aa18.78■□□□□ 0.6
CUL1-201ENST00000325222 PLXNC1O60486 1568 aa18.77■□□□□ 0.6
CUL1-201ENST00000325222 ZMYND15Q9H091 742 aa18.77■□□□□ 0.6
CUL1-201ENST00000325222 CLUAP1Q96AJ1 413 aa18.76■□□□□ 0.59
CUL1-201ENST00000325222 SCAF11Q99590 1463 aaKnown RBP18.76■□□□□ 0.59
CUL1-201ENST00000325222 NPC1L1Q9UHC9 1359 aa18.76■□□□□ 0.59
CUL1-201ENST00000325222 PLEKHG5O94827 1062 aa18.76■□□□□ 0.59
CUL1-201ENST00000325222 ANTXR1Q9H6X2 564 aa18.76■□□□□ 0.59
CUL1-201ENST00000325222 TNNQ9UQP3 1299 aa18.76■□□□□ 0.59
CUL1-201ENST00000325222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.76■□□□□ 0.594e-7■■■□□ 15.7
CUL1-201ENST00000325222 CARD14Q9BXL6 1004 aa18.75■□□□□ 0.59
CUL1-201ENST00000325222 PDE3AQ14432 1141 aa18.74■□□□□ 0.59
CUL1-201ENST00000325222 DUOX2Q9NRD8 1548 aa18.74■□□□□ 0.59
CUL1-201ENST00000325222 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
CUL1-201ENST00000325222 ERCC6Q03468 1493 aa18.73■□□□□ 0.59
CUL1-201ENST00000325222 RRAGDQ9NQL2 400 aaPredicted RBP18.73■□□□□ 0.59
CUL1-201ENST00000325222 CDCA8Q53HL2 280 aa18.72■□□□□ 0.59
CUL1-201ENST00000325222 WWC1Q8IX03 1113 aa18.72■□□□□ 0.59
CUL1-201ENST00000325222 PCDHB15Q9Y5E8 787 aa18.72■□□□□ 0.59
CUL1-201ENST00000325222 CENPJQ9HC77 1338 aaPredicted RBP18.72■□□□□ 0.59
CUL1-201ENST00000325222 RLBP1P12271 317 aa18.71■□□□□ 0.59
CUL1-201ENST00000325222 MAPK8IP3Q9UPT6 1336 aa18.71■□□□□ 0.59
CUL1-201ENST00000325222 SCAPERQ9BY12 1400 aa18.71■□□□□ 0.58
CUL1-201ENST00000325222 SPHKAPQ2M3C7 1700 aa18.69■□□□□ 0.58
CUL1-201ENST00000325222 TBC1D2Q9BYX2 928 aa18.68■□□□□ 0.58
CUL1-201ENST00000325222 PODXL2Q9NZ53 605 aa18.68■□□□□ 0.58
CUL1-201ENST00000325222 BECN1Q14457 450 aa18.68■□□□□ 0.58
CUL1-201ENST00000325222 RRP7AQ9Y3A4 280 aaKnown RBP18.68■□□□□ 0.58
CUL1-201ENST00000325222 CANXP27824 592 aaKnown RBP18.67■□□□□ 0.58
CUL1-201ENST00000325222 TBC1D32Q96NH3 1257 aa18.67■□□□□ 0.58
CUL1-201ENST00000325222 ERVK-7P63135 1459 aa18.67■□□□□ 0.58
CUL1-201ENST00000325222 CEP152O94986 1710 aa18.66■□□□□ 0.58
CUL1-201ENST00000325222 RARSP54136 660 aaKnown RBP18.66■□□□□ 0.58
CUL1-201ENST00000325222 CLTCL1P53675 1640 aa18.66■□□□□ 0.58
CUL1-201ENST00000325222 NEUROD2Q15784 382 aa18.66■□□□□ 0.58
CUL1-201ENST00000325222 PDZRN3Q9UPQ7 1066 aa18.66■□□□□ 0.58
CUL1-201ENST00000325222 BCL2L13Q9BXK5 485 aa18.65■□□□□ 0.58
CUL1-201ENST00000325222 TRPM2O94759 1503 aa18.65■□□□□ 0.58
CUL1-201ENST00000325222 KDM5AP29375 1690 aaKnown RBP18.65■□□□□ 0.58
CUL1-201ENST00000325222 TRAPPC8Q9Y2L5 1435 aa18.64■□□□□ 0.57
CUL1-201ENST00000325222 CFAP70Q5T0N1 1121 aa18.64■□□□□ 0.57
CUL1-201ENST00000325222 SPRYD3Q8NCJ5 442 aa18.64■□□□□ 0.57
CUL1-201ENST00000325222 NINLQ9Y2I6 1382 aa18.63■□□□□ 0.57
CUL1-201ENST00000325222 PTPRTO14522 1441 aa18.63■□□□□ 0.57
CUL1-201ENST00000325222 ARXQ96QS3 562 aa18.63■□□□□ 0.57
CUL1-201ENST00000325222 POLR3AO14802 1390 aaPredicted RBP18.61■□□□□ 0.57
CUL1-201ENST00000325222 XRCC6P12956 609 aaKnown RBP eCLIP18.61■□□□□ 0.57
CUL1-201ENST00000325222 NGEFQ8N5V2 710 aa18.6■□□□□ 0.57
CUL1-201ENST00000325222 SHPRHQ149N8 1683 aa18.6■□□□□ 0.57
CUL1-201ENST00000325222 TNNT2P45379 298 aaPredicted RBP18.6■□□□□ 0.57
CUL1-201ENST00000325222 ADGRF5Q8IZF2 1346 aa18.59■□□□□ 0.57
CUL1-201ENST00000325222 PMFBP1Q8TBY8 1022 aa18.59■□□□□ 0.57
CUL1-201ENST00000325222 PHF23Q9BUL5 403 aaPredicted RBP18.59■□□□□ 0.57
CUL1-201ENST00000325222 PANK2Q9BZ23 570 aa18.59■□□□□ 0.57
CUL1-201ENST00000325222 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
CUL1-201ENST00000325222 RTEL1-TNFRSF6BF6WH68 1400 aa18.58■□□□□ 0.56
CUL1-201ENST00000325222 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.56
CUL1-201ENST00000325222 FSD2A1L4K1 749 aa18.58■□□□□ 0.56
CUL1-201ENST00000325222 L1TD1Q5T7N2 865 aaKnown RBP18.57■□□□□ 0.56
CUL1-201ENST00000325222 NAP1L5Q96NT1 182 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms