RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 CCDC47Q96A33 483 aaKnown RBP25.72■■□□□ 1.71
RNF40-201ENST00000324685 NEXNQ0ZGT2 675 aa25.71■■□□□ 1.71
RNF40-201ENST00000324685 COG6Q9Y2V7 657 aa25.71■■□□□ 1.71
RNF40-201ENST00000324685 ELL2O00472 640 aaPredicted RBP25.71■■□□□ 1.71
RNF40-201ENST00000324685 ANKRD20A12PQ8NF67 263 aa25.71■■□□□ 1.71
RNF40-201ENST00000324685 AMOTL1Q8IY63 956 aa25.7■■□□□ 1.7
RNF40-201ENST00000324685 FANCIQ9NVI1 1328 aa25.7■■□□□ 1.7
RNF40-201ENST00000324685 IPO7O95373 1038 aaKnown RBP25.69■■□□□ 1.7
RNF40-201ENST00000324685 HOOK1Q9UJC3 728 aaKnown RBP25.69■■□□□ 1.7
RNF40-201ENST00000324685 DHX57Q6P158 1386 aaKnown RBP25.69■■□□□ 1.7
RNF40-201ENST00000324685 CHMP5Q9NZZ3 219 aa25.69■■□□□ 1.7
RNF40-201ENST00000324685 API5Q9BZZ5 524 aaKnown RBP25.69■■□□□ 1.7
RNF40-201ENST00000324685 ANO2Q9NQ90 1003 aa25.69■■□□□ 1.7
RNF40-201ENST00000324685 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
RNF40-201ENST00000324685 FOXD4L6Q3SYB3 417 aaPredicted RBP25.68■■□□□ 1.7
RNF40-201ENST00000324685 FOXD4L3Q6VB84 417 aaPredicted RBP25.68■■□□□ 1.7
RNF40-201ENST00000324685 TEFQ10587 303 aa25.67■■□□□ 1.7
RNF40-201ENST00000324685 USP47Q96K76 1375 aa25.67■■□□□ 1.7
RNF40-201ENST00000324685 VGFO15240 615 aaPredicted RBP25.66■■□□□ 1.7
RNF40-201ENST00000324685 ZNF592Q92610 1267 aa25.66■■□□□ 1.7
RNF40-201ENST00000324685 RNF20Q5VTR2 975 aa25.66■■□□□ 1.7
RNF40-201ENST00000324685 NOL10Q9BSC4 688 aaKnown RBP25.66■■□□□ 1.7
RNF40-201ENST00000324685 IFIT2P09913 472 aaKnown RBP25.65■■□□□ 1.7
RNF40-201ENST00000324685 C9orf78Q9NZ63 289 aaPredicted RBP25.65■■□□□ 1.7
RNF40-201ENST00000324685 ZNF771Q7L3S4 317 aaPredicted RBP25.65■■□□□ 1.7
RNF40-201ENST00000324685 PCMTD1Q96MG8 357 aaPredicted RBP25.64■■□□□ 1.7
RNF40-201ENST00000324685 DZIP1LQ8IYY4 767 aaKnown RBP25.64■■□□□ 1.69
RNF40-201ENST00000324685 TEX35Q5T0J7 233 aa25.64■■□□□ 1.69
RNF40-201ENST00000324685 TTC5Q8N0Z6 440 aa25.64■■□□□ 1.69
RNF40-201ENST00000324685 NUTM2FA1L443 756 aa25.63■■□□□ 1.69
RNF40-201ENST00000324685 CPLX1O14810 134 aa25.63■■□□□ 1.69
RNF40-201ENST00000324685 BICD2Q8TD16 824 aa25.61■■□□□ 1.69
RNF40-201ENST00000324685 NUCB2P80303 420 aa25.61■■□□□ 1.69
RNF40-201ENST00000324685 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.61■■□□□ 1.69
RNF40-201ENST00000324685 DIAPH1O60610 1272 aaKnown RBP25.61■■□□□ 1.69
RNF40-201ENST00000324685 APAF1O14727 1248 aa25.6■■□□□ 1.69
RNF40-201ENST00000324685 INTS3Q68E01 1043 aaKnown RBP25.6■■□□□ 1.69
RNF40-201ENST00000324685 TCEAL9Q9UHQ7 104 aa25.59■■□□□ 1.69
RNF40-201ENST00000324685 TOP2AP11388 1531 aaKnown RBP25.59■■□□□ 1.69
RNF40-201ENST00000324685 DDX58O95786 925 aaKnown RBP25.59■■□□□ 1.69
RNF40-201ENST00000324685 HOMER1Q86YM7 354 aa25.58■■□□□ 1.69
RNF40-201ENST00000324685 TRDNQ13061 729 aa25.58■■□□□ 1.69
RNF40-201ENST00000324685 AAMPQ13685 434 aa25.58■■□□□ 1.69
RNF40-201ENST00000324685 TRIM34Q9BYJ4 488 aa25.57■■□□□ 1.68
RNF40-201ENST00000324685 EIF2S2P20042 333 aaKnown RBP25.56■■□□□ 1.68
RNF40-201ENST00000324685 SASS6Q6UVJ0 657 aa25.56■■□□□ 1.68
RNF40-201ENST00000324685 SMC3Q9UQE7 1217 aa25.56■■□□□ 1.68
RNF40-201ENST00000324685 HSP90AB4PQ58FF6 505 aa25.56■■□□□ 1.68
RNF40-201ENST00000324685 G3BP1Q13283 466 aaKnown RBP eCLIP25.55■■□□□ 1.683e-7■■□□□ 13.3
RNF40-201ENST00000324685 VSIG10Q8N0Z9 540 aa25.55■■□□□ 1.68
RNF40-201ENST00000324685 RIPK4P57078 832 aa25.54■■□□□ 1.68
RNF40-201ENST00000324685 APPP05067 770 aa25.54■■□□□ 1.68
RNF40-201ENST00000324685 RUNDC1Q96C34 613 aa25.53■■□□□ 1.68
RNF40-201ENST00000324685 ERICH2A1L162 156 aa25.52■■□□□ 1.68
RNF40-201ENST00000324685 ERC2O15083 957 aa25.52■■□□□ 1.68
RNF40-201ENST00000324685 EVA1CP58658 441 aa25.52■■□□□ 1.68
RNF40-201ENST00000324685 CTDP1Q9Y5B0 961 aaPredicted RBP25.52■■□□□ 1.68
RNF40-201ENST00000324685 ARGLU1Q9NWB6 273 aaPredicted RBP25.51■■□□□ 1.67
RNF40-201ENST00000324685 NFXL1Q6ZNB6 911 aa25.51■■□□□ 1.67
RNF40-201ENST00000324685 ACBD3Q9H3P7 528 aa25.51■■□□□ 1.67
RNF40-201ENST00000324685 VPS37CA5D8V6 355 aaPredicted RBP25.5■■□□□ 1.67
RNF40-201ENST00000324685 CCDC73Q6ZRK6 1079 aa25.5■■□□□ 1.67
RNF40-201ENST00000324685 CDR1P51861 262 aa25.5■■□□□ 1.67
RNF40-201ENST00000324685 MINK1Q8N4C8 1332 aaPredicted RBP25.5■■□□□ 1.67
RNF40-201ENST00000324685 GNAI1P63096 354 aa25.49■■□□□ 1.67
RNF40-201ENST00000324685 FKBP5Q13451 457 aaPredicted RBP25.48■■□□□ 1.67
RNF40-201ENST00000324685 FAM43AQ8N2R8 423 aa25.48■■□□□ 1.67
RNF40-201ENST00000324685 AK7Q96M32 723 aa25.48■■□□□ 1.67
RNF40-201ENST00000324685 SAFBQ15424 915 aaKnown RBP eCLIP25.48■■□□□ 1.67
RNF40-201ENST00000324685 FAM13BQ9NYF5 915 aa25.47■■□□□ 1.67
RNF40-201ENST00000324685 RUFY1Q96T51 708 aa25.47■■□□□ 1.67
RNF40-201ENST00000324685 C22orf23Q9BZE7 217 aa25.47■■□□□ 1.67
RNF40-201ENST00000324685 JPH4Q96JJ6 628 aa25.46■■□□□ 1.67
RNF40-201ENST00000324685 DHX16O60231 1041 aaKnown RBP25.46■■□□□ 1.67
RNF40-201ENST00000324685 PATL2C9JE40 543 aaKnown RBP25.46■■□□□ 1.67
RNF40-201ENST00000324685 VPS37DQ86XT2 251 aa25.46■■□□□ 1.67
RNF40-201ENST00000324685 RAD21O60216 631 aa25.45■■□□□ 1.67
RNF40-201ENST00000324685 MNS1Q8NEH6 495 aa25.45■■□□□ 1.67
RNF40-201ENST00000324685 ANO8Q9HCE9 1232 aaPredicted RBP25.44■■□□□ 1.66
RNF40-201ENST00000324685 IFT57Q9NWB7 429 aa25.44■■□□□ 1.66
RNF40-201ENST00000324685 CCDC39Q9UFE4 941 aa25.44■■□□□ 1.66
RNF40-201ENST00000324685 CDC45O75419 566 aa25.43■■□□□ 1.66
RNF40-201ENST00000324685 NAT10Q9H0A0 1025 aaKnown RBP25.43■■□□□ 1.66
RNF40-201ENST00000324685 NECTIN2Q92692 538 aa25.42■■□□□ 1.66
RNF40-201ENST00000324685 NINLQ9Y2I6 1382 aa25.42■■□□□ 1.66
RNF40-201ENST00000324685 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
RNF40-201ENST00000324685 WWC1Q8IX03 1113 aa25.4■■□□□ 1.66
RNF40-201ENST00000324685 TSPYL4Q9UJ04 414 aa25.4■■□□□ 1.66
RNF40-201ENST00000324685 NOM1Q5C9Z4 860 aaKnown RBP25.4■■□□□ 1.66
RNF40-201ENST00000324685 OLFM4Q6UX06 510 aa25.4■■□□□ 1.66
RNF40-201ENST00000324685 MRE11P49959 708 aa25.39■■□□□ 1.66
RNF40-201ENST00000324685 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.39■■□□□ 1.66
RNF40-201ENST00000324685 STAC3Q96MF2 364 aa25.39■■□□□ 1.66
RNF40-201ENST00000324685 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.39■■□□□ 1.65
RNF40-201ENST00000324685 LETM1O95202 739 aaPredicted RBP25.39■■□□□ 1.65
RNF40-201ENST00000324685 RALYLQ86SE5 291 aaKnown RBP25.38■■□□□ 1.65
RNF40-201ENST00000324685 LNPKQ9C0E8 428 aa25.38■■□□□ 1.65
RNF40-201ENST00000324685 CCDC43Q96MW1 224 aaKnown RBP25.38■■□□□ 1.65
RNF40-201ENST00000324685 PSMA5P28066 241 aa25.38■■□□□ 1.65
RNF40-201ENST00000324685 BRMS1Q9HCU9 246 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms