RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 GSE1Q14687 1217 aa10.81□□□□□ -0.68
SH3TC2-201ENST00000323829 MTMR7Q9Y216 660 aa10.81□□□□□ -0.68
SH3TC2-201ENST00000323829 GOLGA6L3A6NEY3 463 aa10.81□□□□□ -0.68
SH3TC2-201ENST00000323829 SPAG9O60271 1321 aaKnown RBP10.81□□□□□ -0.68
SH3TC2-201ENST00000323829 FOSBP53539 338 aa10.8□□□□□ -0.68
SH3TC2-201ENST00000323829 MFAP1P55081 439 aaKnown RBP10.8□□□□□ -0.68
SH3TC2-201ENST00000323829 CAGE1Q8TC20 777 aa10.8□□□□□ -0.68
SH3TC2-201ENST00000323829 CCDC47Q96A33 483 aaKnown RBP10.8□□□□□ -0.68
SH3TC2-201ENST00000323829 FHAD1B1AJZ9 1412 aa10.8□□□□□ -0.68
SH3TC2-201ENST00000323829 SF3B2Q13435 895 aaKnown RBP10.8□□□□□ -0.68
SH3TC2-201ENST00000323829 DHX57Q6P158 1386 aaKnown RBP10.8□□□□□ -0.68
SH3TC2-201ENST00000323829 FOXD1Q16676 465 aa10.8□□□□□ -0.68
SH3TC2-201ENST00000323829 TSPYL1Q9H0U9 437 aa10.8□□□□□ -0.68
SH3TC2-201ENST00000323829 AMPHP49418 695 aa10.79□□□□□ -0.68
SH3TC2-201ENST00000323829 SLC4A10Q6U841 1118 aa10.79□□□□□ -0.68
SH3TC2-201ENST00000323829 NEBLO76041 1014 aa10.79□□□□□ -0.68
SH3TC2-201ENST00000323829 PHF14O94880 888 aa10.79□□□□□ -0.68
SH3TC2-201ENST00000323829 PPP1R1BQ9UD71 204 aaPredicted RBP10.79□□□□□ -0.68
SH3TC2-201ENST00000323829 DDX23Q9BUQ8 820 aaKnown RBP10.78□□□□□ -0.68
SH3TC2-201ENST00000323829 KDM4AO75164 1064 aa10.78□□□□□ -0.68
SH3TC2-201ENST00000323829 ITPRIPQ8IWB1 547 aa10.78□□□□□ -0.68
SH3TC2-201ENST00000323829 CCDC173Q0VFZ6 552 aa10.78□□□□□ -0.68
SH3TC2-201ENST00000323829 SYNE3Q6ZMZ3 975 aa10.78□□□□□ -0.68
SH3TC2-201ENST00000323829 ANKRD20A12PQ8NF67 263 aa10.78□□□□□ -0.68
SH3TC2-201ENST00000323829 TTC16Q8NEE8 873 aa10.78□□□□□ -0.68
SH3TC2-201ENST00000323829 RAB3GAP2Q9H2M9 1393 aa10.77□□□□□ -0.69
SH3TC2-201ENST00000323829 KIF3AQ9Y496 699 aa10.77□□□□□ -0.69
SH3TC2-201ENST00000323829 SMARCA2P51531 1590 aa10.77□□□□□ -0.69
SH3TC2-201ENST00000323829 HNRNPMP52272 730 aaKnown RBP eCLIP10.77□□□□□ -0.69
SH3TC2-201ENST00000323829 SYTL4Q96C24 671 aaPredicted RBP10.77□□□□□ -0.69
SH3TC2-201ENST00000323829 OFD1O75665 1012 aa10.77□□□□□ -0.69
SH3TC2-201ENST00000323829 IKQ13123 557 aaPredicted RBP10.77□□□□□ -0.69
SH3TC2-201ENST00000323829 FYB1O15117 783 aa10.76□□□□□ -0.69
SH3TC2-201ENST00000323829 CFAP44Q96MT7 982 aa10.76□□□□□ -0.69
SH3TC2-201ENST00000323829 JPH4Q96JJ6 628 aa10.76□□□□□ -0.69
SH3TC2-201ENST00000323829 TRIM29Q14134 588 aa10.76□□□□□ -0.69
SH3TC2-201ENST00000323829 VPS37DQ86XT2 251 aa10.76□□□□□ -0.69
SH3TC2-201ENST00000323829 ATF3P18847 181 aa10.76□□□□□ -0.69
SH3TC2-201ENST00000323829 HSPA5P11021 654 aaKnown RBP10.75□□□□□ -0.69
SH3TC2-201ENST00000323829 GRIPAP1Q4V328 841 aa10.75□□□□□ -0.69
SH3TC2-201ENST00000323829 NGEFQ8N5V2 710 aa10.75□□□□□ -0.69
SH3TC2-201ENST00000323829 RCAN3Q9UKA8 241 aa10.75□□□□□ -0.69
SH3TC2-201ENST00000323829 PKD2Q13563 968 aa10.74□□□□□ -0.69
SH3TC2-201ENST00000323829 SOGA3Q5TF21 947 aa10.74□□□□□ -0.69
SH3TC2-201ENST00000323829 TAX1BP1Q86VP1 789 aa10.74□□□□□ -0.69
SH3TC2-201ENST00000323829 ANKRD18AQ8IVF6 992 aa10.74□□□□□ -0.69
SH3TC2-201ENST00000323829 CEP63Q96MT8 703 aa10.73□□□□□ -0.69
SH3TC2-201ENST00000323829 MYO6Q9UM54 1294 aa10.73□□□□□ -0.69
SH3TC2-201ENST00000323829 PDILTQ8N807 584 aa10.73□□□□□ -0.69
SH3TC2-201ENST00000323829 ZNF526Q8TF50 670 aaPredicted RBP10.73□□□□□ -0.69
SH3TC2-201ENST00000323829 HSP90B2PQ58FF3 399 aa10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 PDE4AP27815 886 aa10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 SYCP1Q15431 976 aa10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 MAPK8IP2Q13387 824 aaPredicted RBP10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 RILPL2Q969X0 211 aa10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 ZBED9Q6R2W3 1325 aa10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 KANK4Q5T7N3 995 aaPredicted RBP10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 EZRP15311 586 aaKnown RBP10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 TERF2IPQ9NYB0 399 aa10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 FAM13BQ9NYF5 915 aa10.72□□□□□ -0.69
SH3TC2-201ENST00000323829 NFXL1Q6ZNB6 911 aa10.71□□□□□ -0.69
SH3TC2-201ENST00000323829 ACBD3Q9H3P7 528 aa10.71□□□□□ -0.69
SH3TC2-201ENST00000323829 PSME1Q06323 249 aa10.71□□□□□ -0.7
SH3TC2-201ENST00000323829 HSP90AB4PQ58FF6 505 aa10.71□□□□□ -0.7
SH3TC2-201ENST00000323829 CCDC88BA6NC98 1476 aa10.7□□□□□ -0.7
SH3TC2-201ENST00000323829 RBM25P49756 843 aaKnown RBP10.7□□□□□ -0.7
SH3TC2-201ENST00000323829 CHMP4AQ9BY43 222 aa10.7□□□□□ -0.7
SH3TC2-201ENST00000323829 CENPHQ9H3R5 247 aa10.7□□□□□ -0.7
SH3TC2-201ENST00000323829 GOLGA6L10A0A0M3HER8 536 aa10.7□□□□□ -0.7
SH3TC2-201ENST00000323829 GOLGA6L10A6NI86 522 aa10.7□□□□□ -0.7
SH3TC2-201ENST00000323829 TMEM87AQ8NBN3 555 aa10.7□□□□□ -0.7
SH3TC2-201ENST00000323829 AXDND1Q5T1B0 1012 aaPredicted RBP10.7□□□□□ -0.7
SH3TC2-201ENST00000323829 ZWINTO95229 277 aa10.7□□□□□ -0.7
SH3TC2-201ENST00000323829 MNS1Q8NEH6 495 aa10.7□□□□□ -0.7
SH3TC2-201ENST00000323829 NUP155O75694 1391 aa10.69□□□□□ -0.7
SH3TC2-201ENST00000323829 CHMP4BP1P59074 171 aa10.69□□□□□ -0.7
SH3TC2-201ENST00000323829 PIP4K2BP78356 416 aa10.69□□□□□ -0.7
SH3TC2-201ENST00000323829 C1orf141Q5JVX7 400 aa10.69□□□□□ -0.7
SH3TC2-201ENST00000323829 STK31Q9BXU1 1019 aa10.69□□□□□ -0.7
SH3TC2-201ENST00000323829 ANKRD30AQ9BXX3 1397 aa10.69□□□□□ -0.7
SH3TC2-201ENST00000323829 U2AF1L5P0DN76 240 aaPredicted RBP10.69□□□□□ -0.7
SH3TC2-201ENST00000323829 U2AF1Q01081 240 aaKnown RBP eCLIP10.69□□□□□ -0.7
SH3TC2-201ENST00000323829 MYCNP04198 464 aaPredicted RBP10.69□□□□□ -0.7
SH3TC2-201ENST00000323829 GBP2P32456 591 aaPredicted RBP10.69□□□□□ -0.7
SH3TC2-201ENST00000323829 MATR3P43243 847 aaKnown RBP eCLIP10.69□□□□□ -0.7
SH3TC2-201ENST00000323829 GIMAP7Q8NHV1 300 aa10.68□□□□□ -0.7
SH3TC2-201ENST00000323829 EIF3AQ14152 1382 aaKnown RBP10.68□□□□□ -0.7
SH3TC2-201ENST00000323829 PDCL3Q9H2J4 239 aa10.68□□□□□ -0.7
SH3TC2-201ENST00000323829 SERPINA10Q9UK55 444 aa10.68□□□□□ -0.7
SH3TC2-201ENST00000323829 CCDC175P0C221 793 aa10.68□□□□□ -0.7
SH3TC2-201ENST00000323829 WDR78Q5VTH9 848 aa10.68□□□□□ -0.7
SH3TC2-201ENST00000323829 HOOK1Q9UJC3 728 aaKnown RBP10.68□□□□□ -0.7
SH3TC2-201ENST00000323829 IL27Q8NEV9 243 aa10.67□□□□□ -0.7
SH3TC2-201ENST00000323829 DNAJC2Q99543 621 aaKnown RBP10.67□□□□□ -0.7
SH3TC2-201ENST00000323829 ROCK2O75116 1388 aaKnown RBP10.67□□□□□ -0.7
SH3TC2-201ENST00000323829 PDE3BQ13370 1112 aa10.67□□□□□ -0.7
SH3TC2-201ENST00000323829 ARHGAP35Q9NRY4 1499 aa10.67□□□□□ -0.7
SH3TC2-201ENST00000323829 PTPRGP23470 1445 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms