RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 WDR66Q8TBY9 1149 aa11.79□□□□□ -0.52
COL12A1-201ENST00000322507 HSPA5P11021 654 aaKnown RBP11.79□□□□□ -0.52
COL12A1-201ENST00000322507 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
COL12A1-201ENST00000322507 MYBBP1AQ9BQG0 1328 aaKnown RBP11.79□□□□□ -0.52
COL12A1-201ENST00000322507 ZBED9Q6R2W3 1325 aa11.78□□□□□ -0.52
COL12A1-201ENST00000322507 CAVIN1Q6NZI2 390 aaKnown RBP11.78□□□□□ -0.52
COL12A1-201ENST00000322507 ANKRD20A12PQ8NF67 263 aa11.78□□□□□ -0.52
COL12A1-201ENST00000322507 RASSF8Q8NHQ8 419 aa11.77□□□□□ -0.52
COL12A1-201ENST00000322507 SOGA1O94964 1423 aa11.77□□□□□ -0.53
COL12A1-201ENST00000322507 CPLX2Q6PUV4 134 aaKnown RBP11.77□□□□□ -0.53
COL12A1-201ENST00000322507 CFAP57Q96MR6 1250 aa11.77□□□□□ -0.53
COL12A1-201ENST00000322507 RUFY2Q8WXA3 655 aa11.76□□□□□ -0.53
COL12A1-201ENST00000322507 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
COL12A1-201ENST00000322507 SEPT6Q14141 434 aa11.76□□□□□ -0.53
COL12A1-201ENST00000322507 IPO7O95373 1038 aaKnown RBP11.76□□□□□ -0.53
COL12A1-201ENST00000322507 GZF1Q9H116 711 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-201ENST00000322507 DHX8Q14562 1220 aaKnown RBP11.76□□□□□ -0.53
COL12A1-201ENST00000322507 FAM114A1Q8IWE2 563 aa11.76□□□□□ -0.53
COL12A1-201ENST00000322507 CLASRPQ8N2M8 674 aaKnown RBP11.76□□□□□ -0.53
COL12A1-201ENST00000322507 E9PSI1 815 aa11.76□□□□□ -0.53
COL12A1-201ENST00000322507 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.75□□□□□ -0.53
COL12A1-201ENST00000322507 POLR3GO15318 223 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-201ENST00000322507 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.75□□□□□ -0.53
COL12A1-201ENST00000322507 CCAR2Q8N163 923 aaKnown RBP11.75□□□□□ -0.53
COL12A1-201ENST00000322507 ISY1Q9ULR0 285 aaKnown RBP11.75□□□□□ -0.53
COL12A1-201ENST00000322507 CPSF2Q9P2I0 782 aaKnown RBP11.75□□□□□ -0.53
COL12A1-201ENST00000322507 MPHOSPH10O00566 681 aaKnown RBP11.75□□□□□ -0.53
COL12A1-201ENST00000322507 CTR9Q6PD62 1173 aa11.74□□□□□ -0.53
COL12A1-201ENST00000322507 CCP110O43303 1012 aa11.74□□□□□ -0.53
COL12A1-201ENST00000322507 KIAA1328Q86T90 577 aa11.74□□□□□ -0.53
COL12A1-201ENST00000322507 SENP3-EIF4A1A0A087X0R7 540 aa11.74□□□□□ -0.53
COL12A1-201ENST00000322507 AMOTL1Q8IY63 956 aa11.74□□□□□ -0.53
COL12A1-201ENST00000322507 SF3A1Q15459 793 aaKnown RBP11.73□□□□□ -0.53
COL12A1-201ENST00000322507 FAM161AQ3B820 660 aa11.73□□□□□ -0.53
COL12A1-201ENST00000322507 GBP2P32456 591 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-201ENST00000322507 H3BQV1 296 aa11.72□□□□□ -0.53
COL12A1-201ENST00000322507 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
COL12A1-201ENST00000322507 PDCL2Q8N4E4 241 aa11.72□□□□□ -0.53
COL12A1-201ENST00000322507 CCDC47Q96A33 483 aaKnown RBP11.72□□□□□ -0.53
COL12A1-201ENST00000322507 CCDC39Q9UFE4 941 aa11.72□□□□□ -0.53
COL12A1-201ENST00000322507 AKAP17AQ02040 695 aaKnown RBP11.72□□□□□ -0.53
COL12A1-201ENST00000322507 MRVI1Q9Y6F6 885 aa11.72□□□□□ -0.53
COL12A1-201ENST00000322507 SEPT14Q6ZU15 432 aa11.72□□□□□ -0.53
COL12A1-201ENST00000322507 ZKSCAN1P17029 563 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-201ENST00000322507 RNF20Q5VTR2 975 aa11.72□□□□□ -0.53
COL12A1-201ENST00000322507 EVC2Q86UK5 1308 aa11.71□□□□□ -0.53
COL12A1-201ENST00000322507 CCDC175P0C221 793 aa11.71□□□□□ -0.53
COL12A1-201ENST00000322507 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
COL12A1-201ENST00000322507 KIF21BO75037 1637 aa11.71□□□□□ -0.54
COL12A1-201ENST00000322507 ENOX2Q16206 610 aaKnown RBP11.71□□□□□ -0.54
COL12A1-201ENST00000322507 SENP3Q9H4L4 574 aaPredicted RBP11.71□□□□□ -0.54
COL12A1-201ENST00000322507 LIG1P18858 919 aa11.71□□□□□ -0.54
COL12A1-201ENST00000322507 EIF3JO75822 258 aaKnown RBP11.7□□□□□ -0.54
COL12A1-201ENST00000322507 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
COL12A1-201ENST00000322507 TPD52L1Q16890 204 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-201ENST00000322507 AEBP1Q8IUX7 1158 aa11.7□□□□□ -0.54
COL12A1-201ENST00000322507 MIA2Q96PC5 1412 aa11.7□□□□□ -0.54
COL12A1-201ENST00000322507 SYNE3Q6ZMZ3 975 aa11.7□□□□□ -0.54
COL12A1-201ENST00000322507 SLKQ9H2G2 1235 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-201ENST00000322507 BECN2A8MW95 431 aa11.7□□□□□ -0.54
COL12A1-201ENST00000322507 DDX19BQ9UMR2 479 aa11.7□□□□□ -0.54
COL12A1-201ENST00000322507 BBXQ8WY36 941 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-201ENST00000322507 CSB-PGBD3P0DP91 1061 aa11.69□□□□□ -0.54
COL12A1-201ENST00000322507 ZKSCAN2Q63HK3 967 aa11.69□□□□□ -0.54
COL12A1-201ENST00000322507 MFAP1P55081 439 aaKnown RBP11.69□□□□□ -0.54
COL12A1-201ENST00000322507 FAM184AQ8NB25 1140 aa11.69□□□□□ -0.54
COL12A1-201ENST00000322507 TTLL5Q6EMB2 1281 aa11.68□□□□□ -0.54
COL12A1-201ENST00000322507 MIPOL1Q8TD10 442 aa11.68□□□□□ -0.54
COL12A1-201ENST00000322507 FANCIQ9NVI1 1328 aa11.68□□□□□ -0.54
COL12A1-201ENST00000322507 NF2P35240 595 aa11.68□□□□□ -0.54
COL12A1-201ENST00000322507 GTF2A1P52655 376 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-201ENST00000322507 TDO2P48775 406 aa11.67□□□□□ -0.54
COL12A1-201ENST00000322507 NAT10Q9H0A0 1025 aaKnown RBP11.67□□□□□ -0.54
COL12A1-201ENST00000322507 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-201ENST00000322507 NUCB2P80303 420 aa11.67□□□□□ -0.54
COL12A1-201ENST00000322507 TCHPQ9BT92 498 aa11.67□□□□□ -0.54
COL12A1-201ENST00000322507 PAK3O75914 559 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-201ENST00000322507 HSP90AB4PQ58FF6 505 aa11.67□□□□□ -0.54
COL12A1-201ENST00000322507 GPATCH11Q8N954 259 aa11.67□□□□□ -0.54
COL12A1-201ENST00000322507 NOL10Q9BSC4 688 aaKnown RBP11.67□□□□□ -0.54
COL12A1-201ENST00000322507 TAOK2Q9UL54 1235 aa11.67□□□□□ -0.54
COL12A1-201ENST00000322507 DZIP1Q86YF9 867 aaKnown RBP11.67□□□□□ -0.54
COL12A1-201ENST00000322507 CECR2Q9BXF3 1484 aa11.67□□□□□ -0.54
COL12A1-201ENST00000322507 SHTN1A0MZ66 631 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 KIF7Q2M1P5 1343 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 TRIM29Q14134 588 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 SARNPP82979 210 aaKnown RBP11.66□□□□□ -0.54
COL12A1-201ENST00000322507 G3V3G9 751 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 MYOM3Q5VTT5 1437 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 EZRP15311 586 aaKnown RBP11.66□□□□□ -0.54
COL12A1-201ENST00000322507 AMPHP49418 695 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 LUZP1Q86V48 1076 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 WASHC2CQ9Y4E1 1318 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 GGT6Q6P531 493 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 RABEP1Q15276 862 aa11.66□□□□□ -0.54
COL12A1-201ENST00000322507 WASHC2AQ641Q2 1341 aa11.65□□□□□ -0.54
COL12A1-201ENST00000322507 NINLQ9Y2I6 1382 aa11.65□□□□□ -0.54
COL12A1-201ENST00000322507 CREBRFQ8IUR6 639 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms