RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 PPP1R15AO75807 674 aaPredicted RBP30.43■■■□□ 2.46
YBX1-201ENST00000321358 KDM5AP29375 1690 aaKnown RBP30.43■■■□□ 2.46
YBX1-201ENST00000321358 VGFO15240 615 aaPredicted RBP30.42■■■□□ 2.46
YBX1-201ENST00000321358 ZNF142P52746 1687 aaPredicted RBP30.41■■■□□ 2.46
YBX1-201ENST00000321358 KDM2AQ9Y2K7 1162 aa30.41■■■□□ 2.46
YBX1-201ENST00000321358 UBR1Q8IWV7 1749 aa30.4■■■□□ 2.46
YBX1-201ENST00000321358 RIMS2Q9UQ26 1411 aa30.4■■■□□ 2.46
YBX1-201ENST00000321358 TXNDC2Q86VQ3 553 aa30.4■■■□□ 2.46
YBX1-201ENST00000321358 ANKLE2Q86XL3 938 aa30.4■■■□□ 2.46
YBX1-201ENST00000321358 NUTM2DQ5VT03 806 aaPredicted RBP30.37■■■□□ 2.45
YBX1-201ENST00000321358 SLIT1O75093 1534 aa30.34■■■□□ 2.45
YBX1-201ENST00000321358 ARHGAP23Q9P227 1491 aa30.32■■■□□ 2.44
YBX1-201ENST00000321358 ZEB1P37275 1124 aaPredicted RBP30.32■■■□□ 2.44
YBX1-201ENST00000321358 BCANQ96GW7 911 aa30.32■■■□□ 2.44
YBX1-201ENST00000321358 ZFYVE9O95405 1425 aa30.32■■■□□ 2.44
YBX1-201ENST00000321358 LTKP29376 864 aa30.32■■■□□ 2.44
YBX1-201ENST00000321358 NEXMIFQ5QGS0 1516 aa30.29■■■□□ 2.44
YBX1-201ENST00000321358 SCAF11Q99590 1463 aaKnown RBP30.28■■■□□ 2.44
YBX1-201ENST00000321358 MYO5BQ9ULV0 1848 aa30.28■■■□□ 2.44
YBX1-201ENST00000321358 ADGRF5Q8IZF2 1346 aa30.27■■■□□ 2.44
YBX1-201ENST00000321358 MYOM2P54296 1465 aa30.25■■■□□ 2.43
YBX1-201ENST00000321358 NCKAP5LQ9HCH0 1330 aa30.25■■■□□ 2.43
YBX1-201ENST00000321358 SENP3Q9H4L4 574 aaPredicted RBP30.22■■■□□ 2.43
YBX1-201ENST00000321358 PLEKHG1Q9ULL1 1385 aa30.22■■■□□ 2.43
YBX1-201ENST00000321358 PPLO60437 1756 aa30.2■■■□□ 2.42
YBX1-201ENST00000321358 PRAG1Q86YV5 1406 aa30.17■■■□□ 2.42
YBX1-201ENST00000321358 DMRT2Q9Y5R5 561 aa30.16■■■□□ 2.42
YBX1-201ENST00000321358 NPHP4O75161 1426 aaPredicted RBP30.15■■■□□ 2.42
YBX1-201ENST00000321358 PIK3C2GO75747 1445 aa30.15■■■□□ 2.42
YBX1-201ENST00000321358 NRXN1Q9ULB1 1477 aa30.15■■■□□ 2.42
YBX1-201ENST00000321358 IFT172Q9UG01 1749 aa30.14■■■□□ 2.42
YBX1-201ENST00000321358 NBPF8Q3BBV2 869 aa30.13■■■□□ 2.41
YBX1-201ENST00000321358 SLC26A8Q96RN1 970 aa30.13■■■□□ 2.41
YBX1-201ENST00000321358 C14orf93Q9H972 538 aaKnown RBP30.13■■■□□ 2.41
YBX1-201ENST00000321358 STRCQ7RTU9 1775 aa30.13■■■□□ 2.41
YBX1-201ENST00000321358 MED14O60244 1454 aa30.13■■■□□ 2.41
YBX1-201ENST00000321358 CFAP70Q5T0N1 1121 aa30.12■■■□□ 2.41
YBX1-201ENST00000321358 TBX22Q9Y458 520 aa30.11■■■□□ 2.41
YBX1-201ENST00000321358 SETBP1Q9Y6X0 1596 aa30.06■■■□□ 2.4
YBX1-201ENST00000321358 POLR1AO95602 1720 aaPredicted RBP30.05■■■□□ 2.4
YBX1-201ENST00000321358 ADAMTS13Q76LX8 1427 aa30.04■■■□□ 2.4
YBX1-201ENST00000321358 ROCK2O75116 1388 aaKnown RBP30.04■■■□□ 2.4
YBX1-201ENST00000321358 ALKQ9UM73 1620 aa30.02■■■□□ 2.4
YBX1-201ENST00000321358 NBPF1Q3BBV0 1214 aa30.01■■■□□ 2.4
YBX1-201ENST00000321358 IQGAP1P46940 1657 aa30.01■■■□□ 2.39
YBX1-201ENST00000321358 TMEM132EQ6IEE7 984 aa30.01■■■□□ 2.39
YBX1-201ENST00000321358 ILDR1Q86SU0 546 aaPredicted RBP30.01■■■□□ 2.39
YBX1-201ENST00000321358 DIP2AQ14689 1571 aa29.99■■■□□ 2.39
YBX1-201ENST00000321358 CARD11Q9BXL7 1154 aa29.99■■■□□ 2.39
YBX1-201ENST00000321358 METP08581 1390 aa29.97■■■□□ 2.39
YBX1-201ENST00000321358 PIK3R4Q99570 1358 aa29.97■■■□□ 2.39
YBX1-201ENST00000321358 RALGAPBQ86X10 1494 aa29.97■■■□□ 2.39
YBX1-201ENST00000321358 LAMC1P11047 1609 aa29.97■■■□□ 2.39
YBX1-201ENST00000321358 NRXN3Q9Y4C0 1643 aa29.96■■■□□ 2.39
YBX1-201ENST00000321358 STK26Q9P289 416 aa29.94■■■□□ 2.38
YBX1-201ENST00000321358 KIAA1210Q9ULL0 1709 aa29.93■■■□□ 2.38
YBX1-201ENST00000321358 AMOTL2Q9Y2J4 779 aa29.91■■■□□ 2.38
YBX1-201ENST00000321358 GPRASP1Q5JY77 1395 aa29.91■■■□□ 2.38
YBX1-201ENST00000321358 TRPM1Q7Z4N2 1603 aa29.91■■■□□ 2.38
YBX1-201ENST00000321358 KCNA6P17658 529 aa29.91■■■□□ 2.38
YBX1-201ENST00000321358 LRPPRCP42704 1394 aaKnown RBP29.89■■■□□ 2.38
YBX1-201ENST00000321358 YTHDC2Q9H6S0 1430 aaKnown RBP29.89■■■□□ 2.38
YBX1-201ENST00000321358 TRAK1Q9UPV9 953 aa29.89■■■□□ 2.38
YBX1-201ENST00000321358 ADGRB1O14514 1584 aa29.87■■■□□ 2.37
YBX1-201ENST00000321358 ABCC11Q96J66 1382 aa29.86■■■□□ 2.37
YBX1-201ENST00000321358 CERKQ8TCT0 537 aa29.86■■■□□ 2.37
YBX1-201ENST00000321358 FBXO41Q8TF61 875 aa29.85■■■□□ 2.37
YBX1-201ENST00000321358 EIF3AQ14152 1382 aaKnown RBP29.83■■■□□ 2.37
YBX1-201ENST00000321358 ASXL1Q8IXJ9 1541 aa29.83■■■□□ 2.37
YBX1-201ENST00000321358 PTPRUQ92729 1446 aa29.83■■■□□ 2.37
YBX1-201ENST00000321358 EIF4G2P78344 907 aaKnown RBP eCLIP29.81■■■□□ 2.36
YBX1-201ENST00000321358 POGKQ9P215 609 aa29.81■■■□□ 2.36
YBX1-201ENST00000321358 SETD1AO15047 1707 aaKnown RBP29.81■■■□□ 2.36
YBX1-201ENST00000321358 SIRT1Q96EB6 747 aa29.81■■■□□ 2.36
YBX1-201ENST00000321358 ZNF335Q9H4Z2 1342 aaPredicted RBP29.79■■■□□ 2.36
YBX1-201ENST00000321358 USP47Q96K76 1375 aa29.78■■■□□ 2.36
YBX1-201ENST00000321358 TECPR2O15040 1411 aa29.77■■■□□ 2.36
YBX1-201ENST00000321358 PRAM1Q96QH2 718 aa29.77■■■□□ 2.36
YBX1-201ENST00000321358 PROSER2Q86WR7 435 aaPredicted RBP29.76■■■□□ 2.36
YBX1-201ENST00000321358 LTBP4Q8N2S1 1624 aa29.76■■■□□ 2.35
YBX1-201ENST00000321358 PTCH1Q13635 1447 aa29.74■■■□□ 2.35
YBX1-201ENST00000321358 FAM135BQ49AJ0 1406 aa29.74■■■□□ 2.35
YBX1-201ENST00000321358 CENPJQ9HC77 1338 aaPredicted RBP29.73■■■□□ 2.35
YBX1-201ENST00000321358 ROBO2Q9HCK4 1378 aa29.73■■■□□ 2.35
YBX1-201ENST00000321358 WAPLQ7Z5K2 1190 aa29.73■■■□□ 2.35
YBX1-201ENST00000321358 SAFB2Q14151 953 aaKnown RBP eCLIP29.72■■■□□ 2.35
YBX1-201ENST00000321358 DLC1Q96QB1 1528 aa29.72■■■□□ 2.35
YBX1-201ENST00000321358 ST20-MTHFSA0A0A6YYL1 179 aa29.71■■■□□ 2.35
YBX1-201ENST00000321358 NKTRP30414 1462 aaKnown RBP29.71■■■□□ 2.35
YBX1-201ENST00000321358 CHD2O14647 1828 aaKnown RBP29.71■■■□□ 2.35
YBX1-201ENST00000321358 SLC24A1O60721 1099 aa29.7■■■□□ 2.34
YBX1-201ENST00000321358 HSPA5P11021 654 aaKnown RBP29.7■■■□□ 2.34
YBX1-201ENST00000321358 C14orf37Q86TY3 774 aa29.7■■■□□ 2.34
YBX1-201ENST00000321358 NWD1Q149M9 1564 aa29.69■■■□□ 2.34
YBX1-201ENST00000321358 XRN1Q8IZH2 1706 aaKnown RBP29.68■■■□□ 2.34
YBX1-201ENST00000321358 CPS1P31327 1500 aa29.67■■■□□ 2.34
YBX1-201ENST00000321358 PLEKHH1Q9ULM0 1364 aa29.65■■■□□ 2.34
YBX1-201ENST00000321358 RBM33Q96EV2 1170 aaKnown RBP29.64■■■□□ 2.34
YBX1-201ENST00000321358 KNDC1Q76NI1 1749 aa29.64■■■□□ 2.34
YBX1-201ENST00000321358 TMEM94Q12767 1356 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms