RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 DCAF11Q8TEB1 546 aa19.54■□□□□ 0.72
PRPF18-201ENST00000320054 ZNF326Q5BKZ1 582 aaKnown RBP19.53■□□□□ 0.72
PRPF18-201ENST00000320054 ZFYVE9O95405 1425 aa19.51■□□□□ 0.71
PRPF18-201ENST00000320054 SLIT1O75093 1534 aa19.51■□□□□ 0.71
PRPF18-201ENST00000320054 KIAA1210Q9ULL0 1709 aa19.51■□□□□ 0.71
PRPF18-201ENST00000320054 NRXN1Q9ULB1 1477 aa19.51■□□□□ 0.71
PRPF18-201ENST00000320054 ARHGAP23Q9P227 1491 aa19.5■□□□□ 0.71
PRPF18-201ENST00000320054 TRPM1Q7Z4N2 1603 aa19.5■□□□□ 0.71
PRPF18-201ENST00000320054 PRAG1Q86YV5 1406 aa19.5■□□□□ 0.71
PRPF18-201ENST00000320054 THEMISQ8N1K5 641 aaPredicted RBP19.49■□□□□ 0.71
PRPF18-201ENST00000320054 RIMS2Q9UQ26 1411 aa19.49■□□□□ 0.71
PRPF18-201ENST00000320054 TMEM2Q9UHN6 1383 aa19.48■□□□□ 0.71
PRPF18-201ENST00000320054 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
PRPF18-201ENST00000320054 VGFO15240 615 aaPredicted RBP19.47■□□□□ 0.71
PRPF18-201ENST00000320054 LAMC1P11047 1609 aa19.47■□□□□ 0.71
PRPF18-201ENST00000320054 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.46■□□□□ 0.71
PRPF18-201ENST00000320054 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
PRPF18-201ENST00000320054 NBPF8Q3BBV2 869 aa19.45■□□□□ 0.7
PRPF18-201ENST00000320054 RALGAPBQ86X10 1494 aa19.44■□□□□ 0.7
PRPF18-201ENST00000320054 POLR1AO95602 1720 aaPredicted RBP19.44■□□□□ 0.7
PRPF18-201ENST00000320054 PIK3C2GO75747 1445 aa19.43■□□□□ 0.7
PRPF18-201ENST00000320054 ADGRF5Q8IZF2 1346 aa19.43■□□□□ 0.7
PRPF18-201ENST00000320054 SETBP1Q9Y6X0 1596 aa19.4■□□□□ 0.7
PRPF18-201ENST00000320054 NRXN3Q9Y4C0 1643 aa19.4■□□□□ 0.7
PRPF18-201ENST00000320054 IQGAP1P46940 1657 aa19.4■□□□□ 0.7
PRPF18-201ENST00000320054 SETD1AO15047 1707 aaKnown RBP19.39■□□□□ 0.7
PRPF18-201ENST00000320054 EID1Q9Y6B2 187 aa19.39■□□□□ 0.69
PRPF18-201ENST00000320054 LMTK3Q96Q04 1460 aa19.39■□□□□ 0.69
PRPF18-201ENST00000320054 SCAF11Q99590 1463 aaKnown RBP19.39■□□□□ 0.69
PRPF18-201ENST00000320054 PLEKHG1Q9ULL1 1385 aa19.37■□□□□ 0.69
PRPF18-201ENST00000320054 NUTM2DQ5VT03 806 aaPredicted RBP19.37■□□□□ 0.69
PRPF18-201ENST00000320054 ALKQ9UM73 1620 aa19.36■□□□□ 0.69
PRPF18-201ENST00000320054 GPRASP1Q5JY77 1395 aa19.36■□□□□ 0.69
PRPF18-201ENST00000320054 LTKP29376 864 aa19.36■□□□□ 0.69
PRPF18-201ENST00000320054 TXNDC2Q86VQ3 553 aa19.36■□□□□ 0.69
PRPF18-201ENST00000320054 C14orf93Q9H972 538 aaKnown RBP19.35■□□□□ 0.69
PRPF18-201ENST00000320054 ANKLE2Q86XL3 938 aa19.34■□□□□ 0.69
PRPF18-201ENST00000320054 DIP2AQ14689 1571 aa19.34■□□□□ 0.69
PRPF18-201ENST00000320054 MED14O60244 1454 aa19.33■□□□□ 0.68
PRPF18-201ENST00000320054 ROCK2O75116 1388 aaKnown RBP19.32■□□□□ 0.68
PRPF18-201ENST00000320054 ADGRB1O14514 1584 aa19.32■□□□□ 0.68
PRPF18-201ENST00000320054 CFAP70Q5T0N1 1121 aa19.32■□□□□ 0.68
PRPF18-201ENST00000320054 NBPF1Q3BBV0 1214 aa19.3■□□□□ 0.68
PRPF18-201ENST00000320054 ADAMTS13Q76LX8 1427 aa19.3■□□□□ 0.68
PRPF18-201ENST00000320054 ASXL1Q8IXJ9 1541 aa19.3■□□□□ 0.68
PRPF18-201ENST00000320054 STRCQ7RTU9 1775 aa19.29■□□□□ 0.68
PRPF18-201ENST00000320054 CARD11Q9BXL7 1154 aa19.28■□□□□ 0.68
PRPF18-201ENST00000320054 KNDC1Q76NI1 1749 aa19.27■□□□□ 0.68
PRPF18-201ENST00000320054 NPHP4O75161 1426 aaPredicted RBP19.26■□□□□ 0.67
PRPF18-201ENST00000320054 ARHGEF28Q8N1W1 1705 aaKnown RBP19.25■□□□□ 0.67
PRPF18-201ENST00000320054 BCANQ96GW7 911 aa19.24■□□□□ 0.67
PRPF18-201ENST00000320054 TBX22Q9Y458 520 aa19.24■□□□□ 0.67
PRPF18-201ENST00000320054 CHD2O14647 1828 aaKnown RBP19.23■□□□□ 0.67
PRPF18-201ENST00000320054 USP47Q96K76 1375 aa19.23■□□□□ 0.67
PRPF18-201ENST00000320054 HSPA2P54652 639 aa19.23■□□□□ 0.67
PRPF18-201ENST00000320054 EIF4G2P78344 907 aaKnown RBP eCLIP19.23■□□□□ 0.67
PRPF18-201ENST00000320054 NCKAP5LQ9HCH0 1330 aa19.23■□□□□ 0.67
PRPF18-201ENST00000320054 PIK3R4Q99570 1358 aa19.22■□□□□ 0.67
PRPF18-201ENST00000320054 YTHDC2Q9H6S0 1430 aaKnown RBP19.22■□□□□ 0.67
PRPF18-201ENST00000320054 TMEM132EQ6IEE7 984 aa19.21■□□□□ 0.67
PRPF18-201ENST00000320054 DLC1Q96QB1 1528 aa19.2■□□□□ 0.66
PRPF18-201ENST00000320054 METP08581 1390 aa19.2■□□□□ 0.66
PRPF18-201ENST00000320054 LRPPRCP42704 1394 aaKnown RBP19.2■□□□□ 0.66
PRPF18-201ENST00000320054 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
PRPF18-201ENST00000320054 XRN1Q8IZH2 1706 aaKnown RBP19.2■□□□□ 0.66
PRPF18-201ENST00000320054 EIF3AQ14152 1382 aaKnown RBP19.19■□□□□ 0.66
PRPF18-201ENST00000320054 SLC26A8Q96RN1 970 aa19.19■□□□□ 0.66
PRPF18-201ENST00000320054 HSPA5P11021 654 aaKnown RBP19.18■□□□□ 0.66
PRPF18-201ENST00000320054 CPS1P31327 1500 aa19.18■□□□□ 0.66
PRPF18-201ENST00000320054 ABCC11Q96J66 1382 aa19.18■□□□□ 0.66
PRPF18-201ENST00000320054 QRICH2Q9H0J4 1663 aa19.17■□□□□ 0.66
PRPF18-201ENST00000320054 TECPR2O15040 1411 aa19.17■□□□□ 0.66
PRPF18-201ENST00000320054 PTPRUQ92729 1446 aa19.15■□□□□ 0.66
PRPF18-201ENST00000320054 NWD1Q149M9 1564 aa19.15■□□□□ 0.66
PRPF18-201ENST00000320054 SIRT1Q96EB6 747 aa19.14■□□□□ 0.65
PRPF18-201ENST00000320054 TRAK1Q9UPV9 953 aa19.13■□□□□ 0.65
PRPF18-201ENST00000320054 FAM135BQ49AJ0 1406 aa19.12■□□□□ 0.65
PRPF18-201ENST00000320054 ST20-MTHFSA0A0A6YYL1 179 aa19.12■□□□□ 0.65
PRPF18-201ENST00000320054 STK26Q9P289 416 aa19.12■□□□□ 0.65
PRPF18-201ENST00000320054 PTCH1Q13635 1447 aa19.11■□□□□ 0.65
PRPF18-201ENST00000320054 SBNO2Q9Y2G9 1366 aa19.11■□□□□ 0.65
PRPF18-201ENST00000320054 ZNF316A6NFI3 1004 aaPredicted RBP19.11■□□□□ 0.65
PRPF18-201ENST00000320054 CENPJQ9HC77 1338 aaPredicted RBP19.1■□□□□ 0.65
PRPF18-201ENST00000320054 AEBP2Q6ZN18 517 aaPredicted RBP19.1■□□□□ 0.65
PRPF18-201ENST00000320054 AMOTL2Q9Y2J4 779 aa19.09■□□□□ 0.65
PRPF18-201ENST00000320054 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
PRPF18-201ENST00000320054 STRCP1A6NGW2 1772 aa19.09■□□□□ 0.65
PRPF18-201ENST00000320054 SLC24A1O60721 1099 aa19.08■□□□□ 0.64
PRPF18-201ENST00000320054 TESK2Q96S53 571 aa19.08■□□□□ 0.64
PRPF18-201ENST00000320054 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.64
PRPF18-201ENST00000320054 KCNA6P17658 529 aa19.07■□□□□ 0.64
PRPF18-201ENST00000320054 NKTRP30414 1462 aaKnown RBP19.06■□□□□ 0.64
PRPF18-201ENST00000320054 ROBO2Q9HCK4 1378 aa19.06■□□□□ 0.64
PRPF18-201ENST00000320054 PRAM1Q96QH2 718 aa19.05■□□□□ 0.64
PRPF18-201ENST00000320054 POGKQ9P215 609 aa19.05■□□□□ 0.64
PRPF18-201ENST00000320054 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.04■□□□□ 0.64
PRPF18-201ENST00000320054 ADGRB2O60241 1585 aa19.03■□□□□ 0.64
PRPF18-201ENST00000320054 PLEKHH1Q9ULM0 1364 aa19.02■□□□□ 0.64
PRPF18-201ENST00000320054 TMF1P82094 1093 aa19.01■□□□□ 0.63
PRPF18-201ENST00000320054 WAPLQ7Z5K2 1190 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms