RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ZFYVE9O95405 1425 aa22.04■■□□□ 1.12
RPP40-201ENST00000319533 NKTRP30414 1462 aaKnown RBP22.03■■□□□ 1.12
RPP40-201ENST00000319533 UNC13BO14795 1591 aa22.01■■□□□ 1.11
RPP40-201ENST00000319533 PROSER2Q86WR7 435 aaPredicted RBP22■■□□□ 1.11
RPP40-201ENST00000319533 ROCK1Q13464 1354 aa21.99■■□□□ 1.11
RPP40-201ENST00000319533 PLEKHG1Q9ULL1 1385 aa21.99■■□□□ 1.11
RPP40-201ENST00000319533 TMEM131LA2VDJ0 1609 aa21.99■■□□□ 1.11
RPP40-201ENST00000319533 GCC2Q8IWJ2 1684 aa21.99■■□□□ 1.11
RPP40-201ENST00000319533 RIMS2Q9UQ26 1411 aa21.97■■□□□ 1.11
RPP40-201ENST00000319533 MYO5BQ9ULV0 1848 aa21.96■■□□□ 1.11
RPP40-201ENST00000319533 HDGFP51858 240 aaKnown RBP21.96■■□□□ 1.11
RPP40-201ENST00000319533 RGS17Q9UGC6 210 aaPredicted RBP21.95■■□□□ 1.1
RPP40-201ENST00000319533 CHD2O14647 1828 aaKnown RBP21.94■■□□□ 1.1
RPP40-201ENST00000319533 RBM33Q96EV2 1170 aaKnown RBP21.94■■□□□ 1.1
RPP40-201ENST00000319533 ROBO1Q9Y6N7 1651 aa21.94■■□□□ 1.1
RPP40-201ENST00000319533 E9PCH4 1651 aa21.93■■□□□ 1.1
RPP40-201ENST00000319533 TBX22Q9Y458 520 aa21.93■■□□□ 1.1
RPP40-201ENST00000319533 IQGAP3Q86VI3 1631 aa21.92■■□□□ 1.1
RPP40-201ENST00000319533 BCANQ96GW7 911 aa21.92■■□□□ 1.1
RPP40-201ENST00000319533 MSH6P52701 1360 aa21.91■■□□□ 1.1
RPP40-201ENST00000319533 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.91■■□□□ 1.1
RPP40-201ENST00000319533 NCOA3Q9Y6Q9 1424 aa21.9■■□□□ 1.1
RPP40-201ENST00000319533 PPP1R15AO75807 674 aaPredicted RBP21.89■■□□□ 1.09
RPP40-201ENST00000319533 ADAMTS13Q76LX8 1427 aa21.89■■□□□ 1.09
RPP40-201ENST00000319533 SLAIN2Q9P270 581 aa21.88■■□□□ 1.09
RPP40-201ENST00000319533 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
RPP40-201ENST00000319533 PIK3R4Q99570 1358 aa21.87■■□□□ 1.09
RPP40-201ENST00000319533 NUP155O75694 1391 aa21.85■■□□□ 1.09
RPP40-201ENST00000319533 CHGAP10645 457 aaKnown RBP21.84■■□□□ 1.09
RPP40-201ENST00000319533 PHLPP1O60346 1717 aa21.8■■□□□ 1.08
RPP40-201ENST00000319533 JCADQ9P266 1359 aa21.79■■□□□ 1.08
RPP40-201ENST00000319533 NUTM2DQ5VT03 806 aaPredicted RBP21.79■■□□□ 1.08
RPP40-201ENST00000319533 POTEAQ6S8J7 498 aa21.79■■□□□ 1.08
RPP40-201ENST00000319533 C19orf44Q9H6X5 657 aa21.78■■□□□ 1.08
RPP40-201ENST00000319533 TRPM2O94759 1503 aa21.77■■□□□ 1.08
RPP40-201ENST00000319533 COL16A1Q07092 1604 aaPredicted RBP21.77■■□□□ 1.07
RPP40-201ENST00000319533 CADPS2Q86UW7 1296 aa21.76■■□□□ 1.07
RPP40-201ENST00000319533 PTPRUQ92729 1446 aa21.76■■□□□ 1.07
RPP40-201ENST00000319533 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.76■■□□□ 1.07
RPP40-201ENST00000319533 ITGAEP38570 1179 aa21.75■■□□□ 1.07
RPP40-201ENST00000319533 AMOTL2Q9Y2J4 779 aa21.74■■□□□ 1.07
RPP40-201ENST00000319533 SETBP1Q9Y6X0 1596 aa21.74■■□□□ 1.07
RPP40-201ENST00000319533 SPHKAPQ2M3C7 1700 aa21.73■■□□□ 1.07
RPP40-201ENST00000319533 AHDC1Q5TGY3 1603 aaPredicted RBP21.73■■□□□ 1.07
RPP40-201ENST00000319533 NRXN3Q9Y4C0 1643 aa21.73■■□□□ 1.07
RPP40-201ENST00000319533 C14orf37Q86TY3 774 aa21.72■■□□□ 1.07
RPP40-201ENST00000319533 ATF3P18847 181 aa21.71■■□□□ 1.07
RPP40-201ENST00000319533 XRN1Q8IZH2 1706 aaKnown RBP21.7■■□□□ 1.06
RPP40-201ENST00000319533 SPATA31A6Q5VVP1 1343 aa21.7■■□□□ 1.06
RPP40-201ENST00000319533 DCCP43146 1447 aa21.7■■□□□ 1.06
RPP40-201ENST00000319533 PIAS4Q8N2W9 510 aaPredicted RBP21.69■■□□□ 1.06
RPP40-201ENST00000319533 PPARGC1BQ86YN6 1023 aaKnown RBP21.68■■□□□ 1.06
RPP40-201ENST00000319533 RRBP1Q9P2E9 1410 aaKnown RBP21.68■■□□□ 1.06
RPP40-201ENST00000319533 LRP6O75581 1613 aa21.66■■□□□ 1.06
RPP40-201ENST00000319533 SHPRHQ149N8 1683 aa21.66■■□□□ 1.06
RPP40-201ENST00000319533 BRINP3Q76B58 766 aa21.65■■□□□ 1.06
RPP40-201ENST00000319533 NAIPQ13075 1403 aa21.64■■□□□ 1.06
RPP40-201ENST00000319533 METP08581 1390 aa21.64■■□□□ 1.06
RPP40-201ENST00000319533 CLTCL1P53675 1640 aa21.64■■□□□ 1.05
RPP40-201ENST00000319533 NEXMIFQ5QGS0 1516 aa21.64■■□□□ 1.05
RPP40-201ENST00000319533 ZNF326Q5BKZ1 582 aaKnown RBP21.63■■□□□ 1.05
RPP40-201ENST00000319533 MST1RQ04912 1400 aa21.61■■□□□ 1.05
RPP40-201ENST00000319533 ASXL1Q8IXJ9 1541 aa21.6■■□□□ 1.05
RPP40-201ENST00000319533 SETD5Q9C0A6 1442 aa21.58■■□□□ 1.05
RPP40-201ENST00000319533 ADGRL3Q9HAR2 1447 aa21.57■■□□□ 1.04
RPP40-201ENST00000319533 ZNF772Q68DY9 489 aaPredicted RBP21.57■■□□□ 1.04
RPP40-201ENST00000319533 NHSL1Q5SYE7 1610 aa21.57■■□□□ 1.04
RPP40-201ENST00000319533 KIF1BO60333 1816 aa21.56■■□□□ 1.04
RPP40-201ENST00000319533 MEX3CQ5U5Q3 659 aaKnown RBP21.55■■□□□ 1.04
RPP40-201ENST00000319533 SETD1AO15047 1707 aaKnown RBP21.55■■□□□ 1.04
RPP40-201ENST00000319533 HFM1A2PYH4 1435 aa21.55■■□□□ 1.04
RPP40-201ENST00000319533 PRAG1Q86YV5 1406 aa21.53■■□□□ 1.04
RPP40-201ENST00000319533 NALCNQ8IZF0 1738 aa21.52■■□□□ 1.04
RPP40-201ENST00000319533 VGFO15240 615 aaPredicted RBP21.52■■□□□ 1.04
RPP40-201ENST00000319533 PTCH1Q13635 1447 aa21.52■■□□□ 1.04
RPP40-201ENST00000319533 LRRC59Q96AG4 307 aaKnown RBP21.51■■□□□ 1.03
RPP40-201ENST00000319533 RPGRIP1LQ68CZ1 1315 aa21.51■■□□□ 1.03
RPP40-201ENST00000319533 LAMC1P11047 1609 aa21.47■■□□□ 1.03
RPP40-201ENST00000319533 C1orf167Q5SNV9 1468 aa21.47■■□□□ 1.03
RPP40-201ENST00000319533 CDK12Q9NYV4 1490 aaPredicted RBP21.47■■□□□ 1.03
RPP40-201ENST00000319533 NUTM2BA6NNL0 878 aaPredicted RBP21.47■■□□□ 1.03
RPP40-201ENST00000319533 NUTM2EB1AL46 878 aaPredicted RBP21.47■■□□□ 1.03
RPP40-201ENST00000319533 NUTM2AQ8IVF1 878 aaPredicted RBP21.47■■□□□ 1.03
RPP40-201ENST00000319533 TRIM52Q96A61 297 aa21.47■■□□□ 1.03
RPP40-201ENST00000319533 ROBO2Q9HCK4 1378 aa21.47■■□□□ 1.03
RPP40-201ENST00000319533 PNPLA6Q8IY17 1366 aa21.46■■□□□ 1.03
RPP40-201ENST00000319533 RXRBP28702 533 aa21.45■■□□□ 1.02
RPP40-201ENST00000319533 SLC4A1APQ9BWU0 796 aaKnown RBP21.45■■□□□ 1.02
RPP40-201ENST00000319533 DDX17Q92841 729 aaKnown RBP21.44■■□□□ 1.02
RPP40-201ENST00000319533 AFF2P51816 1311 aa21.44■■□□□ 1.02
RPP40-201ENST00000319533 PPLO60437 1756 aa21.43■■□□□ 1.02
RPP40-201ENST00000319533 UPF1Q92900 1129 aaKnown RBP eCLIP21.43■■□□□ 1.02
RPP40-201ENST00000319533 SOS2Q07890 1332 aaPredicted RBP21.41■■□□□ 1.02
RPP40-201ENST00000319533 ORAI2Q96SN7 254 aa21.38■■□□□ 1.01
RPP40-201ENST00000319533 C8orf37Q96NL8 207 aa21.35■■□□□ 1.01
RPP40-201ENST00000319533 SPATA31E1Q6ZUB1 1445 aa21.35■■□□□ 1.01
RPP40-201ENST00000319533 RBM6P78332 1123 aaKnown RBP21.34■■□□□ 1.01
RPP40-201ENST00000319533 QTRT2Q9H974 415 aaKnown RBP21.34■■□□□ 1.01
RPP40-201ENST00000319533 CDC42BPGQ6DT37 1551 aa21.34■■□□□ 1.01
RPP40-201ENST00000319533 ADGRF5Q8IZF2 1346 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms