RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 IQGAP1P46940 1657 aa24.95■■□□□ 1.59
SHISA3-201ENST00000319234 HNRNPUQ00839 825 aaKnown RBP eCLIP24.95■■□□□ 1.58
SHISA3-201ENST00000319234 SCAF11Q99590 1463 aaKnown RBP24.95■■□□□ 1.58
SHISA3-201ENST00000319234 CHGAP10645 457 aaKnown RBP24.94■■□□□ 1.58
SHISA3-201ENST00000319234 NRXN1Q9ULB1 1477 aa24.94■■□□□ 1.58
SHISA3-201ENST00000319234 ADGRF5Q8IZF2 1346 aa24.94■■□□□ 1.58
SHISA3-201ENST00000319234 CFAP65Q6ZU64 1925 aaKnown RBP24.94■■□□□ 1.58
SHISA3-201ENST00000319234 BCANQ96GW7 911 aa24.94■■□□□ 1.58
SHISA3-201ENST00000319234 SIGLEC1Q9BZZ2 1709 aa24.94■■□□□ 1.58
SHISA3-201ENST00000319234 TMF1P82094 1093 aa24.93■■□□□ 1.58
SHISA3-201ENST00000319234 AGLP35573 1532 aa24.93■■□□□ 1.58
SHISA3-201ENST00000319234 RPGRIP1LQ68CZ1 1315 aa24.92■■□□□ 1.58
SHISA3-201ENST00000319234 DISP3Q9P2K9 1392 aa24.91■■□□□ 1.58
SHISA3-201ENST00000319234 SYNMO15061 1565 aa24.91■■□□□ 1.58
SHISA3-201ENST00000319234 PIK3C2BO00750 1634 aa24.91■■□□□ 1.58
SHISA3-201ENST00000319234 CCDC184Q52MB2 194 aa24.89■■□□□ 1.58
SHISA3-201ENST00000319234 CFAP70Q5T0N1 1121 aa24.89■■□□□ 1.58
SHISA3-201ENST00000319234 PPP6R1Q9UPN7 881 aa24.89■■□□□ 1.58
SHISA3-201ENST00000319234 MRS2Q9HD23 443 aa24.87■■□□□ 1.57
SHISA3-201ENST00000319234 EIF3AQ14152 1382 aaKnown RBP24.87■■□□□ 1.57
SHISA3-201ENST00000319234 SLC52A1Q9NWF4 448 aa24.86■■□□□ 1.57
SHISA3-201ENST00000319234 PPLO60437 1756 aa24.86■■□□□ 1.57
SHISA3-201ENST00000319234 KTN1Q86UP2 1357 aaKnown RBP24.82■■□□□ 1.56
SHISA3-201ENST00000319234 IDI1Q13907 227 aa24.82■■□□□ 1.56
SHISA3-201ENST00000319234 ARHGEF40Q8TER5 1519 aa24.82■■□□□ 1.56
SHISA3-201ENST00000319234 PREX1Q8TCU6 1659 aa24.82■■□□□ 1.56
SHISA3-201ENST00000319234 ERICH6BQ5W0A0 696 aa24.82■■□□□ 1.56
SHISA3-201ENST00000319234 PIK3C2GO75747 1445 aa24.81■■□□□ 1.56
SHISA3-201ENST00000319234 CDCA8Q53HL2 280 aa24.8■■□□□ 1.56
SHISA3-201ENST00000319234 C14orf93Q9H972 538 aaKnown RBP24.8■■□□□ 1.56
SHISA3-201ENST00000319234 SETBP1Q9Y6X0 1596 aa24.8■■□□□ 1.56
SHISA3-201ENST00000319234 SLC24A1O60721 1099 aa24.79■■□□□ 1.56
SHISA3-201ENST00000319234 RALBP1Q15311 655 aa24.79■■□□□ 1.56
SHISA3-201ENST00000319234 PER1O15534 1290 aaPredicted RBP24.78■■□□□ 1.56
SHISA3-201ENST00000319234 CNGB1Q14028 1251 aaPredicted RBP24.78■■□□□ 1.56
SHISA3-201ENST00000319234 ZBED9Q6R2W3 1325 aa24.77■■□□□ 1.56
SHISA3-201ENST00000319234 VGFO15240 615 aaPredicted RBP24.77■■□□□ 1.56
SHISA3-201ENST00000319234 NEXMIFQ5QGS0 1516 aa24.76■■□□□ 1.55
SHISA3-201ENST00000319234 ERVK-7P63135 1459 aa24.75■■□□□ 1.55
SHISA3-201ENST00000319234 FAM9BQ8IZU0 186 aa24.75■■□□□ 1.55
SHISA3-201ENST00000319234 PANK3Q9H999 370 aa24.74■■□□□ 1.55
SHISA3-201ENST00000319234 FBXO31Q5XUX0 539 aaPredicted RBP24.74■■□□□ 1.55
SHISA3-201ENST00000319234 ZFYVE9O95405 1425 aa24.72■■□□□ 1.55
SHISA3-201ENST00000319234 MYBBP1AQ9BQG0 1328 aaKnown RBP24.72■■□□□ 1.55
SHISA3-201ENST00000319234 CLTCQ00610 1675 aaKnown RBP24.72■■□□□ 1.55
SHISA3-201ENST00000319234 TMEM131LA2VDJ0 1609 aa24.71■■□□□ 1.55
SHISA3-201ENST00000319234 ADGRB1O14514 1584 aa24.71■■□□□ 1.55
SHISA3-201ENST00000319234 MYO3AQ8NEV4 1616 aa24.7■■□□□ 1.55
SHISA3-201ENST00000319234 PARD3Q8TEW0 1356 aa24.7■■□□□ 1.54
SHISA3-201ENST00000319234 MLECQ14165 292 aa24.69■■□□□ 1.54
SHISA3-201ENST00000319234 SBNO2Q9Y2G9 1366 aa24.69■■□□□ 1.54
SHISA3-201ENST00000319234 BRD4O60885 1362 aaPredicted RBP24.68■■□□□ 1.54
SHISA3-201ENST00000319234 NUTM2DQ5VT03 806 aaPredicted RBP24.67■■□□□ 1.54
SHISA3-201ENST00000319234 TMC1Q8TDI8 760 aa24.67■■□□□ 1.54
SHISA3-201ENST00000319234 CENPJQ9HC77 1338 aaPredicted RBP24.66■■□□□ 1.54
SHISA3-201ENST00000319234 SPATA31D1Q6ZQQ2 1576 aa24.66■■□□□ 1.54
SHISA3-201ENST00000319234 TMEM132EQ6IEE7 984 aa24.64■■□□□ 1.54
SHISA3-201ENST00000319234 TRAK1Q9UPV9 953 aa24.64■■□□□ 1.54
SHISA3-201ENST00000319234 KDM5AP29375 1690 aaKnown RBP24.64■■□□□ 1.53
SHISA3-201ENST00000319234 MYO5BQ9ULV0 1848 aa24.63■■□□□ 1.53
SHISA3-201ENST00000319234 PNISRQ8TF01 805 aaKnown RBP24.63■■□□□ 1.53
SHISA3-201ENST00000319234 ESF1Q9H501 851 aaKnown RBP24.62■■□□□ 1.53
SHISA3-201ENST00000319234 NLRP13Q86W25 1043 aa24.62■■□□□ 1.53
SHISA3-201ENST00000319234 STAG3Q9UJ98 1225 aa24.6■■□□□ 1.53
SHISA3-201ENST00000319234 CC2D1BQ5T0F9 858 aaKnown RBP24.6■■□□□ 1.53
SHISA3-201ENST00000319234 KNSTRNQ9Y448 316 aa24.6■■□□□ 1.53
SHISA3-201ENST00000319234 RBM19Q9Y4C8 960 aaKnown RBP24.6■■□□□ 1.53
SHISA3-201ENST00000319234 MYOM1P52179 1685 aa24.59■■□□□ 1.53
SHISA3-201ENST00000319234 ZMYM3Q14202 1370 aa24.59■■□□□ 1.53
SHISA3-201ENST00000319234 PPP4R2Q9NY27 417 aa24.58■■□□□ 1.53
SHISA3-201ENST00000319234 SMG6Q86US8 1419 aaKnown RBP24.55■■□□□ 1.52
SHISA3-201ENST00000319234 QRICH2Q9H0J4 1663 aa24.55■■□□□ 1.52
SHISA3-201ENST00000319234 A2ML1A8K2U0 1454 aa24.55■■□□□ 1.52
SHISA3-201ENST00000319234 LRPPRCP42704 1394 aaKnown RBP24.54■■□□□ 1.52
SHISA3-201ENST00000319234 AMER1Q5JTC6 1135 aaPredicted RBP24.54■■□□□ 1.52
SHISA3-201ENST00000319234 ASXL1Q8IXJ9 1541 aa24.52■■□□□ 1.52
SHISA3-201ENST00000319234 NPC1L1Q9UHC9 1359 aa24.52■■□□□ 1.52
SHISA3-201ENST00000319234 IRX6P78412 446 aaPredicted RBP24.52■■□□□ 1.52
SHISA3-201ENST00000319234 ANP32EQ9BTT0 268 aa24.51■■□□□ 1.51
SHISA3-201ENST00000319234 ARHGEF28Q8N1W1 1705 aaKnown RBP24.51■■□□□ 1.51
SHISA3-201ENST00000319234 TRHP20396 242 aaPredicted RBP24.51■■□□□ 1.51
SHISA3-201ENST00000319234 PUS7Q96PZ0 661 aaKnown RBP24.49■■□□□ 1.51
SHISA3-201ENST00000319234 RIMS2Q9UQ26 1411 aa24.49■■□□□ 1.51
SHISA3-201ENST00000319234 ALKQ9UM73 1620 aa24.47■■□□□ 1.51
SHISA3-201ENST00000319234 TNRQ92752 1358 aa24.46■■□□□ 1.51
SHISA3-201ENST00000319234 EVC2Q86UK5 1308 aa24.46■■□□□ 1.51
SHISA3-201ENST00000319234 YTHDC2Q9H6S0 1430 aaKnown RBP24.44■■□□□ 1.5
SHISA3-201ENST00000319234 STK26Q9P289 416 aa24.44■■□□□ 1.5
SHISA3-201ENST00000319234 NUDCQ9Y266 331 aa24.44■■□□□ 1.5
SHISA3-201ENST00000319234 CARD14Q9BXL6 1004 aa24.43■■□□□ 1.5
SHISA3-201ENST00000319234 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.43■■□□□ 1.5
SHISA3-201ENST00000319234 SENP3Q9H4L4 574 aaPredicted RBP24.43■■□□□ 1.5
SHISA3-201ENST00000319234 PPP2R1AP30153 589 aa24.42■■□□□ 1.5
SHISA3-201ENST00000319234 PTPRMP28827 1452 aa24.41■■□□□ 1.5
SHISA3-201ENST00000319234 RNF123Q5XPI4 1314 aa24.41■■□□□ 1.5
SHISA3-201ENST00000319234 TULP4Q9NRJ4 1543 aa24.41■■□□□ 1.5
SHISA3-201ENST00000319234 INSRP06213 1382 aa24.41■■□□□ 1.5
SHISA3-201ENST00000319234 HDGFP51858 240 aaKnown RBP24.38■■□□□ 1.49
SHISA3-201ENST00000319234 SLC12A5Q9H2X9 1139 aa24.38■■□□□ 1.49
SHISA3-201ENST00000319234 FANCIQ9NVI1 1328 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms