RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 KIF1BO60333 1816 aa27.81■■■□□ 2.04
TTC39C-202ENST00000317571 STAC3Q96MF2 364 aa27.8■■■□□ 2.04
TTC39C-202ENST00000317571 MYOM2P54296 1465 aa27.79■■■□□ 2.04
TTC39C-202ENST00000317571 MYOM1P52179 1685 aa27.79■■■□□ 2.04
TTC39C-202ENST00000317571 CFAP74Q9C0B2 1584 aa27.78■■■□□ 2.04
TTC39C-202ENST00000317571 B4GALNT3Q6L9W6 998 aa27.78■■■□□ 2.04
TTC39C-202ENST00000317571 ADGRF5Q8IZF2 1346 aa27.78■■■□□ 2.04
TTC39C-202ENST00000317571 MLH3Q9UHC1 1453 aa27.76■■■□□ 2.04
TTC39C-202ENST00000317571 HECW2Q9P2P5 1572 aa27.76■■■□□ 2.04
TTC39C-202ENST00000317571 CFAP70Q5T0N1 1121 aa27.76■■■□□ 2.03
TTC39C-202ENST00000317571 SYNMO15061 1565 aa27.75■■■□□ 2.03
TTC39C-202ENST00000317571 NPATQ14207 1427 aa27.72■■■□□ 2.03
TTC39C-202ENST00000317571 ADGRB3O60242 1522 aa27.72■■■□□ 2.03
TTC39C-202ENST00000317571 ANP32EQ9BTT0 268 aa27.72■■■□□ 2.03
TTC39C-202ENST00000317571 NRXN1Q9ULB1 1477 aa27.71■■■□□ 2.03
TTC39C-202ENST00000317571 CFAP65Q6ZU64 1925 aaKnown RBP27.71■■■□□ 2.03
TTC39C-202ENST00000317571 SALL2Q9Y467 1007 aaPredicted RBP27.7■■■□□ 2.02
TTC39C-202ENST00000317571 BLMP54132 1417 aaPredicted RBP27.69■■■□□ 2.02
TTC39C-202ENST00000317571 AMER1Q5JTC6 1135 aaPredicted RBP27.69■■■□□ 2.02
TTC39C-202ENST00000317571 ERVK-7P63135 1459 aa27.66■■■□□ 2.02
TTC39C-202ENST00000317571 EIF3AQ14152 1382 aaKnown RBP27.66■■■□□ 2.02
TTC39C-202ENST00000317571 NOS1P29475 1434 aa27.66■■■□□ 2.02
TTC39C-202ENST00000317571 GGT6Q6P531 493 aa27.66■■■□□ 2.02
TTC39C-202ENST00000317571 KDM5AP29375 1690 aaKnown RBP27.65■■■□□ 2.02
TTC39C-202ENST00000317571 ABCC3O15438 1527 aa27.65■■■□□ 2.02
TTC39C-202ENST00000317571 RAPGEF3O95398 923 aa27.65■■■□□ 2.02
TTC39C-202ENST00000317571 ZMYM4Q5VZL5 1548 aa27.64■■■□□ 2.01
TTC39C-202ENST00000317571 SIGLEC1Q9BZZ2 1709 aa27.63■■■□□ 2.01
TTC39C-202ENST00000317571 KNSTRNQ9Y448 316 aa27.62■■■□□ 2.01
TTC39C-202ENST00000317571 PPLO60437 1756 aa27.62■■■□□ 2.01
TTC39C-202ENST00000317571 INSRP06213 1382 aa27.62■■■□□ 2.01
TTC39C-202ENST00000317571 ASXL1Q8IXJ9 1541 aa27.62■■■□□ 2.01
TTC39C-202ENST00000317571 NEO1Q92859 1461 aa27.61■■■□□ 2.01
TTC39C-202ENST00000317571 CDCA8Q53HL2 280 aa27.61■■■□□ 2.01
TTC39C-202ENST00000317571 PPP2R1AP30153 589 aa27.61■■■□□ 2.01
TTC39C-202ENST00000317571 CDCA7LQ96GN5 454 aa27.6■■■□□ 2.01
TTC39C-202ENST00000317571 MYO3AQ8NEV4 1616 aa27.6■■■□□ 2.01
TTC39C-202ENST00000317571 DIP2CQ9Y2E4 1556 aa27.6■■■□□ 2.01
TTC39C-202ENST00000317571 CAMSAP1Q5T5Y3 1602 aa27.59■■■□□ 2.01
TTC39C-202ENST00000317571 CHGAP10645 457 aaKnown RBP27.57■■■□□ 2
TTC39C-202ENST00000317571 PIK3C2GO75747 1445 aa27.56■■■□□ 2
TTC39C-202ENST00000317571 RICTORQ6R327 1708 aa27.56■■■□□ 2
TTC39C-202ENST00000317571 SETBP1Q9Y6X0 1596 aa27.56■■■□□ 2
TTC39C-202ENST00000317571 ADAMTS8Q9UP79 889 aa27.55■■■□□ 2
TTC39C-202ENST00000317571 PDE3BQ13370 1112 aa27.53■■■□□ 2
TTC39C-202ENST00000317571 ADGRB1O14514 1584 aa27.53■■■□□ 2
TTC39C-202ENST00000317571 RRP1P56182 461 aaKnown RBP27.53■■■□□ 2
TTC39C-202ENST00000317571 NPC1L1Q9UHC9 1359 aa27.52■■■□□ 2
TTC39C-202ENST00000317571 RCAN3Q9UKA8 241 aa27.51■■■□□ 2
TTC39C-202ENST00000317571 PIK3C2BO00750 1634 aa27.51■■□□□ 1.99
TTC39C-202ENST00000317571 ZC3H13Q5T200 1668 aaKnown RBP27.51■■□□□ 1.99
TTC39C-202ENST00000317571 CARD14Q9BXL6 1004 aa27.5■■□□□ 1.99
TTC39C-202ENST00000317571 SBNO2Q9Y2G9 1366 aa27.49■■□□□ 1.99
TTC39C-202ENST00000317571 YEATS2Q9ULM3 1422 aa27.49■■□□□ 1.99
TTC39C-202ENST00000317571 C14orf93Q9H972 538 aaKnown RBP27.48■■□□□ 1.99
TTC39C-202ENST00000317571 QRICH2Q9H0J4 1663 aa27.46■■□□□ 1.99
TTC39C-202ENST00000317571 CCDC136Q96JN2 1154 aa27.46■■□□□ 1.99
TTC39C-202ENST00000317571 TMEM132EQ6IEE7 984 aa27.45■■□□□ 1.98
TTC39C-202ENST00000317571 TRAK1Q9UPV9 953 aa27.45■■□□□ 1.98
TTC39C-202ENST00000317571 PLEKHH1Q9ULM0 1364 aa27.45■■□□□ 1.98
TTC39C-202ENST00000317571 CENPJQ9HC77 1338 aaPredicted RBP27.45■■□□□ 1.98
TTC39C-202ENST00000317571 NEXMIFQ5QGS0 1516 aa27.43■■□□□ 1.98
TTC39C-202ENST00000317571 MSH5O43196 834 aa27.42■■□□□ 1.98
TTC39C-202ENST00000317571 EXOC6Q8TAG9 804 aa27.42■■□□□ 1.98
TTC39C-202ENST00000317571 NUTM2DQ5VT03 806 aaPredicted RBP27.41■■□□□ 1.98
TTC39C-202ENST00000317571 RPGRIP1LQ68CZ1 1315 aa27.4■■□□□ 1.98
TTC39C-202ENST00000317571 SLC24A1O60721 1099 aa27.39■■□□□ 1.97
TTC39C-202ENST00000317571 WDR43Q15061 677 aaKnown RBP eCLIP27.39■■□□□ 1.97
TTC39C-202ENST00000317571 ARHGAP31Q2M1Z3 1444 aa27.38■■□□□ 1.97
TTC39C-202ENST00000317571 GLI2P10070 1586 aa27.38■■□□□ 1.97
TTC39C-202ENST00000317571 FANCIQ9NVI1 1328 aa27.38■■□□□ 1.97
TTC39C-202ENST00000317571 CYB5RLQ6IPT4 315 aa27.37■■□□□ 1.97
TTC39C-202ENST00000317571 ZNF521Q96K83 1311 aa27.37■■□□□ 1.97
TTC39C-202ENST00000317571 ARHGEF28Q8N1W1 1705 aaKnown RBP27.35■■□□□ 1.97
TTC39C-202ENST00000317571 MYO5BQ9ULV0 1848 aa27.34■■□□□ 1.97
TTC39C-202ENST00000317571 PLIN1O60240 522 aa27.34■■□□□ 1.97
TTC39C-202ENST00000317571 IDI1Q13907 227 aa27.33■■□□□ 1.97
TTC39C-202ENST00000317571 SLC12A5Q9H2X9 1139 aa27.32■■□□□ 1.96
TTC39C-202ENST00000317571 CCDC146Q8IYE0 955 aa27.31■■□□□ 1.96
TTC39C-202ENST00000317571 NSD3Q9BZ95 1437 aa27.31■■□□□ 1.96
TTC39C-202ENST00000317571 PREX1Q8TCU6 1659 aa27.3■■□□□ 1.96
TTC39C-202ENST00000317571 TULP4Q9NRJ4 1543 aa27.3■■□□□ 1.96
TTC39C-202ENST00000317571 DUSP27Q5VZP5 1158 aa27.29■■□□□ 1.96
TTC39C-202ENST00000317571 RIMBP3CA6NJZ7 1639 aa27.28■■□□□ 1.96
TTC39C-202ENST00000317571 RIMBP3BA6NNM3 1639 aa27.28■■□□□ 1.96
TTC39C-202ENST00000317571 RIMBP3Q9UFD9 1639 aa27.28■■□□□ 1.96
TTC39C-202ENST00000317571 DIP2BQ9P265 1576 aa27.27■■□□□ 1.96
TTC39C-202ENST00000317571 TMEM131LA2VDJ0 1609 aa27.26■■□□□ 1.96
TTC39C-202ENST00000317571 VGFO15240 615 aaPredicted RBP27.26■■□□□ 1.95
TTC39C-202ENST00000317571 SENP3Q9H4L4 574 aaPredicted RBP27.24■■□□□ 1.95
TTC39C-202ENST00000317571 SHPRHQ149N8 1683 aa27.24■■□□□ 1.95
TTC39C-202ENST00000317571 SPINK5Q9NQ38 1064 aaPredicted RBP27.22■■□□□ 1.95
TTC39C-202ENST00000317571 APAF1O14727 1248 aa27.22■■□□□ 1.95
TTC39C-202ENST00000317571 C20orf194Q5TEA3 1177 aa27.22■■□□□ 1.95
TTC39C-202ENST00000317571 USP32Q8NFA0 1604 aa27.22■■□□□ 1.95
TTC39C-202ENST00000317571 TSPOAP1O95153 1857 aa27.21■■□□□ 1.95
TTC39C-202ENST00000317571 ZFYVE9O95405 1425 aa27.21■■□□□ 1.95
TTC39C-202ENST00000317571 FAM69CQ0P6D2 419 aa27.21■■□□□ 1.95
TTC39C-202ENST00000317571 POLR3AO14802 1390 aaPredicted RBP27.21■■□□□ 1.95
TTC39C-202ENST00000317571 GOLGA2Q08379 1002 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms