RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 NEXMIFQ5QGS0 1516 aa23■■□□□ 1.27
TUBB3-201ENST00000315491 PPLO60437 1756 aa22.99■■□□□ 1.27
TUBB3-201ENST00000315491 UBR1Q8IWV7 1749 aa22.98■■□□□ 1.27
TUBB3-201ENST00000315491 ADGRF5Q8IZF2 1346 aa22.96■■□□□ 1.27
TUBB3-201ENST00000315491 CEP170BQ9Y4F5 1589 aaPredicted RBP22.95■■□□□ 1.26
TUBB3-201ENST00000315491 RIMS2Q9UQ26 1411 aa22.95■■□□□ 1.26
TUBB3-201ENST00000315491 NRXN1Q9ULB1 1477 aa22.95■■□□□ 1.26
TUBB3-201ENST00000315491 VGFO15240 615 aaPredicted RBP22.94■■□□□ 1.26
TUBB3-201ENST00000315491 ZFYVE9O95405 1425 aa22.94■■□□□ 1.26
TUBB3-201ENST00000315491 RALGAPBQ86X10 1494 aa22.94■■□□□ 1.26
TUBB3-201ENST00000315491 NUTM2DQ5VT03 806 aaPredicted RBP22.94■■□□□ 1.26
TUBB3-201ENST00000315491 SETD1BQ9UPS6 1966 aaKnown RBP22.93■■□□□ 1.26
TUBB3-201ENST00000315491 TMEM2Q9UHN6 1383 aa22.93■■□□□ 1.26
TUBB3-201ENST00000315491 THEMISQ8N1K5 641 aaPredicted RBP22.91■■□□□ 1.26
TUBB3-201ENST00000315491 ZNF142P52746 1687 aaPredicted RBP22.91■■□□□ 1.26
TUBB3-201ENST00000315491 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.91■■□□□ 1.26
TUBB3-201ENST00000315491 TRPM1Q7Z4N2 1603 aa22.9■■□□□ 1.26
TUBB3-201ENST00000315491 PIK3C2GO75747 1445 aa22.89■■□□□ 1.26
TUBB3-201ENST00000315491 HDGFP51858 240 aaKnown RBP22.89■■□□□ 1.26
TUBB3-201ENST00000315491 SLIT1O75093 1534 aa22.88■■□□□ 1.25
TUBB3-201ENST00000315491 ARHGAP23Q9P227 1491 aa22.87■■□□□ 1.25
TUBB3-201ENST00000315491 ROCK2O75116 1388 aaKnown RBP22.87■■□□□ 1.25
TUBB3-201ENST00000315491 NBPF1Q3BBV0 1214 aa22.85■■□□□ 1.25
TUBB3-201ENST00000315491 CFAP70Q5T0N1 1121 aa22.84■■□□□ 1.25
TUBB3-201ENST00000315491 KIAA1210Q9ULL0 1709 aa22.84■■□□□ 1.25
TUBB3-201ENST00000315491 GPRASP1Q5JY77 1395 aa22.84■■□□□ 1.25
TUBB3-201ENST00000315491 CARD11Q9BXL7 1154 aa22.84■■□□□ 1.25
TUBB3-201ENST00000315491 C14orf93Q9H972 538 aaKnown RBP22.83■■□□□ 1.24
TUBB3-201ENST00000315491 EID1Q9Y6B2 187 aa22.83■■□□□ 1.24
TUBB3-201ENST00000315491 TXNDC2Q86VQ3 553 aa22.82■■□□□ 1.24
TUBB3-201ENST00000315491 LTKP29376 864 aa22.81■■□□□ 1.24
TUBB3-201ENST00000315491 LAMC1P11047 1609 aa22.79■■□□□ 1.24
TUBB3-201ENST00000315491 EIF4G2P78344 907 aaKnown RBP eCLIP22.78■■□□□ 1.24
TUBB3-201ENST00000315491 SENP3Q9H4L4 574 aaPredicted RBP22.78■■□□□ 1.24
TUBB3-201ENST00000315491 PLEKHG1Q9ULL1 1385 aa22.78■■□□□ 1.24
TUBB3-201ENST00000315491 SCAF11Q99590 1463 aaKnown RBP22.78■■□□□ 1.24
TUBB3-201ENST00000315491 SETBP1Q9Y6X0 1596 aa22.77■■□□□ 1.23
TUBB3-201ENST00000315491 USP47Q96K76 1375 aa22.76■■□□□ 1.23
TUBB3-201ENST00000315491 HSPA5P11021 654 aaKnown RBP22.76■■□□□ 1.23
TUBB3-201ENST00000315491 ALKQ9UM73 1620 aa22.75■■□□□ 1.23
TUBB3-201ENST00000315491 ANKLE2Q86XL3 938 aa22.75■■□□□ 1.23
TUBB3-201ENST00000315491 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
TUBB3-201ENST00000315491 ADGRB1O14514 1584 aa22.74■■□□□ 1.23
TUBB3-201ENST00000315491 ZNF316A6NFI3 1004 aaPredicted RBP22.74■■□□□ 1.23
TUBB3-201ENST00000315491 MYT1Q01538 1121 aa22.74■■□□□ 1.23
TUBB3-201ENST00000315491 BCANQ96GW7 911 aa22.74■■□□□ 1.23
TUBB3-201ENST00000315491 NRXN3Q9Y4C0 1643 aa22.74■■□□□ 1.23
TUBB3-201ENST00000315491 IQGAP1P46940 1657 aa22.72■■□□□ 1.23
TUBB3-201ENST00000315491 TMEM132EQ6IEE7 984 aa22.71■■□□□ 1.23
TUBB3-201ENST00000315491 HIRIP3Q9BW71 556 aaPredicted RBP22.71■■□□□ 1.23
TUBB3-201ENST00000315491 ASXL1Q8IXJ9 1541 aa22.71■■□□□ 1.23
TUBB3-201ENST00000315491 ADAMTS13Q76LX8 1427 aa22.7■■□□□ 1.22
TUBB3-201ENST00000315491 LMTK3Q96Q04 1460 aa22.69■■□□□ 1.22
TUBB3-201ENST00000315491 SETD1AO15047 1707 aaKnown RBP22.68■■□□□ 1.22
TUBB3-201ENST00000315491 MED14O60244 1454 aa22.66■■□□□ 1.22
TUBB3-201ENST00000315491 ST20-MTHFSA0A0A6YYL1 179 aa22.65■■□□□ 1.22
TUBB3-201ENST00000315491 HSPA2P54652 639 aa22.65■■□□□ 1.22
TUBB3-201ENST00000315491 METP08581 1390 aa22.65■■□□□ 1.22
TUBB3-201ENST00000315491 EIF3AQ14152 1382 aaKnown RBP22.65■■□□□ 1.22
TUBB3-201ENST00000315491 NCKAP5LQ9HCH0 1330 aa22.64■■□□□ 1.22
TUBB3-201ENST00000315491 YTHDC2Q9H6S0 1430 aaKnown RBP22.64■■□□□ 1.22
TUBB3-201ENST00000315491 SLC26A8Q96RN1 970 aa22.64■■□□□ 1.22
TUBB3-201ENST00000315491 TBX22Q9Y458 520 aa22.64■■□□□ 1.22
TUBB3-201ENST00000315491 DIP2AQ14689 1571 aa22.64■■□□□ 1.21
TUBB3-201ENST00000315491 NPHP4O75161 1426 aaPredicted RBP22.64■■□□□ 1.21
TUBB3-201ENST00000315491 TRAK1Q9UPV9 953 aa22.63■■□□□ 1.21
TUBB3-201ENST00000315491 POLR1AO95602 1720 aaPredicted RBP22.63■■□□□ 1.21
TUBB3-201ENST00000315491 LRPPRCP42704 1394 aaKnown RBP22.62■■□□□ 1.21
TUBB3-201ENST00000315491 STK26Q9P289 416 aa22.61■■□□□ 1.21
TUBB3-201ENST00000315491 ABCC11Q96J66 1382 aa22.57■■□□□ 1.2
TUBB3-201ENST00000315491 CENPJQ9HC77 1338 aaPredicted RBP22.56■■□□□ 1.2
TUBB3-201ENST00000315491 ARHGEF28Q8N1W1 1705 aaKnown RBP22.56■■□□□ 1.2
TUBB3-201ENST00000315491 DLC1Q96QB1 1528 aa22.56■■□□□ 1.2
TUBB3-201ENST00000315491 TESK2Q96S53 571 aa22.55■■□□□ 1.2
TUBB3-201ENST00000315491 PIK3R4Q99570 1358 aa22.55■■□□□ 1.2
TUBB3-201ENST00000315491 TECPR2O15040 1411 aa22.54■■□□□ 1.2
TUBB3-201ENST00000315491 PTPRUQ92729 1446 aa22.54■■□□□ 1.2
TUBB3-201ENST00000315491 KNDC1Q76NI1 1749 aa22.53■■□□□ 1.2
TUBB3-201ENST00000315491 C11orf95C9JLR9 678 aaPredicted RBP22.53■■□□□ 1.2
TUBB3-201ENST00000315491 SIRT1Q96EB6 747 aa22.51■■□□□ 1.19
TUBB3-201ENST00000315491 PRAM1Q96QH2 718 aa22.51■■□□□ 1.19
TUBB3-201ENST00000315491 SBNO2Q9Y2G9 1366 aa22.51■■□□□ 1.19
TUBB3-201ENST00000315491 POGKQ9P215 609 aa22.5■■□□□ 1.19
TUBB3-201ENST00000315491 AMOTL2Q9Y2J4 779 aa22.5■■□□□ 1.19
TUBB3-201ENST00000315491 CPS1P31327 1500 aa22.5■■□□□ 1.19
TUBB3-201ENST00000315491 WASHC2AQ641Q2 1341 aa22.5■■□□□ 1.19
TUBB3-201ENST00000315491 SLC24A1O60721 1099 aa22.49■■□□□ 1.19
TUBB3-201ENST00000315491 TMF1P82094 1093 aa22.49■■□□□ 1.19
TUBB3-201ENST00000315491 FAM135BQ49AJ0 1406 aa22.49■■□□□ 1.19
TUBB3-201ENST00000315491 CCDC7Q96M83 1385 aa22.49■■□□□ 1.19
TUBB3-201ENST00000315491 STRCQ7RTU9 1775 aa22.49■■□□□ 1.19
TUBB3-201ENST00000315491 QRICH2Q9H0J4 1663 aa22.48■■□□□ 1.19
TUBB3-201ENST00000315491 KIF7Q2M1P5 1343 aa22.48■■□□□ 1.19
TUBB3-201ENST00000315491 SAFB2Q14151 953 aaKnown RBP eCLIP22.47■■□□□ 1.19
TUBB3-201ENST00000315491 WAPLQ7Z5K2 1190 aa22.47■■□□□ 1.19
TUBB3-201ENST00000315491 XRN1Q8IZH2 1706 aaKnown RBP22.47■■□□□ 1.19
TUBB3-201ENST00000315491 ROBO2Q9HCK4 1378 aa22.47■■□□□ 1.19
TUBB3-201ENST00000315491 DISP3Q9P2K9 1392 aa22.47■■□□□ 1.19
TUBB3-201ENST00000315491 PLEKHH1Q9ULM0 1364 aa22.46■■□□□ 1.19
TUBB3-201ENST00000315491 PTCH1Q13635 1447 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms